RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CIB1Q99828 191 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 ACBD6Q9BR61 282 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 MARCH2Q9P0N8 246 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 BAIAP3O94812 1187 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 STAMBPO95630 424 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 PSMC3P17980 439 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 CCND3P30281 292 aaPredicted RBP13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 GSTT1P30711 240 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 STX1BP61266 288 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 DUSP4Q13115 394 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 TUSC3Q13454 348 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 DBN1Q16643 649 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 LSMEM2Q8N112 164 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 PTGR2Q8N8N7 351 aaPredicted RBP13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 TRIB2Q92519 343 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 PKP2Q99959 881 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 CCSER2Q9H7U1 834 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 BRCA1P38398 1863 aaKnown RBP13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 ZNF487B1APH4 448 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 PSMD12O00232 456 aaPredicted RBP13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 RAMP2O60895 175 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 HADHAP40939 763 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 CDKN2DP55273 166 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 NAB1Q13506 487 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 VPS26BQ4G0F5 336 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 MTX3Q5HYI7 312 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 CST9Q5W186 159 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 OR52E8Q6IFG1 317 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 BHLHA9Q7RTU4 235 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 MYO1HQ8N1T3 1032 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 RTKNQ9BST9 563 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 C1orf50Q9BV19 199 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 KIFC1Q9BW19 673 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 CAAP1Q9H8G2 361 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 ENTPD7Q9NQZ7 604 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 VWA7Q9Y334 891 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 SF3B1O75533 1304 aaKnown RBP eCLIP13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 C15orf38-AP3S2A0A0A6YYH1 394 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 A0A1B0GVG6 124 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 A8MT66 165 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 CKMT2P17540 419 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 GLDCP23378 1020 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 CCNCP24863 283 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 PSME3P61289 254 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 FOXD4Q12950 439 aaPredicted RBP13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 MSLNQ13421 630 aaPredicted RBP13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 IL23RQ5VWK5 629 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 DENND5AQ6IQ26 1287 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 FBXL22Q6P050 247 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 TAS2R42Q7RTR8 314 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 ARPINQ7Z6K5 226 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 LGI2Q8N0V4 545 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 ZNF483Q8TF39 744 aaPredicted RBP13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 STYXQ8WUJ0 223 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 OSBPL2Q9H1P3 480 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 EPS15L1Q9UBC2 864 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 SORCS3Q9UPU3 1222 aa13.74□□□□□ -0.21
PRPF40B-209ENST00000548825 A0A1B0GTW7 788 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 KIF3CO14782 793 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 TIPRLO75663 272 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 ATP5F1P24539 256 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 GRIA3P42263 894 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 RENBPP51606 427 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 SLC7A2P52569 658 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 MTTPP55157 894 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 TWF1Q12792 350 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 TSTD2Q5T7W7 516 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 FBXL19Q6PCT2 694 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 LRTOMTQ8WZ04 291 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 LRCH3Q96II8 777 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 GIT1Q9Y2X7 761 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 PCDHGC4Q9Y5F7 938 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 WDR90Q96KV7 1748 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 MRASO14807 208 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 RHOBTB1O94844 696 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 IL1BP01584 269 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 LTA4HP09960 611 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 UQCRBP14927 111 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 CTGFP29279 349 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 RPS24P62847 133 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 PRKCZQ05513 592 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 TMCO4Q5TGY1 634 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 MFSD14CQ5VZR4 134 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 DNAJB14Q8TBM8 379 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 FAM110BQ8TC76 370 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 MYEOVQ96EZ4 313 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 AP4B1Q9Y6B7 739 aa13.73□□□□□ -0.21
PRPF40B-209ENST00000548825 HEATR9A2RTY3 570 aa13.72□□□□□ -0.21
PRPF40B-209ENST00000548825 TMEM114B3SHH9 223 aa13.72□□□□□ -0.21
PRPF40B-209ENST00000548825 CCNT2O60583 730 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-209ENST00000548825 IPO13O94829 963 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-209ENST00000548825 SULT2A1Q06520 285 aa13.72□□□□□ -0.21
PRPF40B-209ENST00000548825 LPIN1Q14693 890 aa13.72□□□□□ -0.21
PRPF40B-209ENST00000548825 TLR1Q15399 786 aa13.72□□□□□ -0.21
PRPF40B-209ENST00000548825 MORN1Q5T089 497 aa13.72□□□□□ -0.21
PRPF40B-209ENST00000548825 PM20D1Q6GTS8 502 aa13.72□□□□□ -0.21
PRPF40B-209ENST00000548825 KRT80Q6KB66 452 aa13.72□□□□□ -0.21
PRPF40B-209ENST00000548825 CYS1Q717R9 158 aa13.72□□□□□ -0.21
PRPF40B-209ENST00000548825 ZNF598Q86UK7 904 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms