RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 NAP1L5Q96NT1 182 aaPredicted RBP11.99□□□□□ -0.49
GABPB1-206ENST00000543881 PEBP4Q96S96 227 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 IL12RB2Q99665 862 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 EPAS1Q99814 870 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 BPIFA3Q9BQP9 254 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 OSBPL1AQ9BXW6 950 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 TRIM7Q9C029 511 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 CATSPERBQ9H7T0 1116 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 PDFQ9HBH1 243 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 STARD5Q9NSY2 213 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 IPO11Q9UI26 975 aaKnown RBP11.99□□□□□ -0.49
GABPB1-206ENST00000543881 PNMA8BQ9ULN7 279 aaPredicted RBP11.99□□□□□ -0.49
GABPB1-206ENST00000543881 MYO6Q9UM54 1294 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 MFHAS1Q9Y4C4 1052 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 COL12A1Q99715 3063 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 BOD1L1Q8NFC6 3051 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 J3KR12 359 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 NEMP1O14524 444 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 FPGTO14772 594 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 TPP1O14773 563 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 CASC3O15234 703 aaKnown RBP11.98□□□□□ -0.49
GABPB1-206ENST00000543881 MMP20O60882 483 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 IGSF6O95976 241 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 CCDC172P0C7W6 258 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 JUNDP17535 347 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 IGFALSP35858 605 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 RABIFP47224 123 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 TPI1P60174 286 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 RHOAP61586 193 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 EIF2B5Q13144 721 aaKnown RBP11.98□□□□□ -0.49
GABPB1-206ENST00000543881 PDE1CQ14123 709 aaPredicted RBP11.98□□□□□ -0.49
GABPB1-206ENST00000543881 ATG14Q6ZNE5 492 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 USP53Q70EK8 1073 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 ZSCAN30Q86W11 494 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 CASKIN2Q8WXE0 1202 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 CELF6Q96J87 481 aaKnown RBP11.98□□□□□ -0.49
GABPB1-206ENST00000543881 ARHGAP9Q9BRR9 750 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 HAUS4Q9H6D7 363 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 MBNL1Q9NR56 388 aaKnown RBP11.98□□□□□ -0.49
GABPB1-206ENST00000543881 PARVAQ9NVD7 372 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 AP4E1Q9UPM8 1137 aa11.98□□□□□ -0.49
GABPB1-206ENST00000543881 TMEM191CA6NGB0 347 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 DDX3XO00571 662 aaKnown RBP eCLIP11.97□□□□□ -0.494e-11■■■□□ 15.2
GABPB1-206ENST00000543881 FGF10O15520 208 aaPredicted RBP11.97□□□□□ -0.49
GABPB1-206ENST00000543881 PIGNO95427 931 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 PSMA2P25787 234 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 RPIAP49247 311 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 PDX1P52945 283 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 SPIDRQ14159 915 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 ASIC2Q16515 512 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 VPS36Q86VN1 386 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 TP53I13Q8NBR0 393 aaPredicted RBP11.97□□□□□ -0.49
GABPB1-206ENST00000543881 DENND6BQ8NEG7 585 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 WDR48Q8TAF3 677 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 EXTL1Q92935 676 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 GLMNQ92990 594 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 NAT6Q93015 286 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 SGF29Q96ES7 293 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 KCTD15Q96SI1 283 aaPredicted RBP11.97□□□□□ -0.49
GABPB1-206ENST00000543881 CCDC3Q9BQI4 270 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 WRAP53Q9BUR4 548 aaKnown RBP11.97□□□□□ -0.49
GABPB1-206ENST00000543881 SNRNP25Q9BV90 132 aaKnown RBP11.97□□□□□ -0.49
GABPB1-206ENST00000543881 BOCQ9BWV1 1114 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 CPEB1Q9BZB8 566 aaKnown RBP11.97□□□□□ -0.49
GABPB1-206ENST00000543881 SLC39A8Q9C0K1 460 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 NAT10Q9H0A0 1025 aaKnown RBP11.97□□□□□ -0.49
GABPB1-206ENST00000543881 TCEAL2Q9H3H9 227 aaPredicted RBP11.97□□□□□ -0.49
GABPB1-206ENST00000543881 DHX35Q9H5Z1 703 aaKnown RBP11.97□□□□□ -0.49
GABPB1-206ENST00000543881 SYNDIG1Q9H7V2 258 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 AIPL1Q9NZN9 384 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 DKK3Q9UBP4 350 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 PCSK1NQ9UHG2 260 aa11.97□□□□□ -0.49
GABPB1-206ENST00000543881 UBR5O95071 2799 aaPredicted RBP11.97□□□□□ -0.49
GABPB1-206ENST00000543881 A0A1B0GTH6 734 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 PLD2O14939 933 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 SUV39H1O43463 412 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 BUB1BO60566 1050 aaPredicted RBP11.96□□□□□ -0.49
GABPB1-206ENST00000543881 PRAMEF11O60813 436 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 FTLP02792 175 aaPredicted RBP11.96□□□□□ -0.49
GABPB1-206ENST00000543881 ITGB2P05107 769 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 SKILP12757 684 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 ITGB6P18564 788 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 SLC5A2P31639 672 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 HTR7P34969 479 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 PRKCIP41743 596 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 RGRP47804 291 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 PAPOLAP51003 745 aaKnown RBP11.96□□□□□ -0.49
GABPB1-206ENST00000543881 NDST2P52849 883 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 RAD51Q06609 339 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 IQCB1Q15051 598 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 TGIF1Q15583 401 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 KLHL40Q2TBA0 621 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 ERMARDQ5T6L9 678 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 AFMIDQ63HM1 303 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 CAVIN1Q6NZI2 390 aaKnown RBP11.96□□□□□ -0.49
GABPB1-206ENST00000543881 ZNF574Q6ZN55 896 aaPredicted RBP11.96□□□□□ -0.49
GABPB1-206ENST00000543881 ZSWIM9Q86XI8 627 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 ARHGAP12Q8IWW6 846 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 SLC35F3Q8IY50 421 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 RBFAQ8N0V3 343 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms