RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 POMKQ9H5K3 350 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 ADAMTS6Q9UKP5 1117 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 FNDC3AQ9Y2H6 1198 aaKnown RBP14.88□□□□□ -0.03
DDX55-209ENST00000542286 TARM1B6A8C7 271 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 FKBP6O75344 327 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 TADA2AO75478 443 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 PIK3R1P27986 724 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 KCNC1P48547 511 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 CSRP3P50461 194 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 RPL14P50914 215 aaKnown RBP14.87□□□□□ -0.03
DDX55-209ENST00000542286 KCNQ1P51787 676 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 FCGRTP55899 365 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 GALNT3Q14435 633 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 RYBPQ8N488 228 aaPredicted RBP14.87□□□□□ -0.03
DDX55-209ENST00000542286 STYXQ8WUJ0 223 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 TREX1Q9NSU2 369 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 NDUFA13Q9P0J0 144 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 CIDEBQ9UHD4 219 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 POMPQ9Y244 141 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 VWA8A3KMH1 1905 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 MIA3Q5JRA6 1907 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 MMP2P08253 660 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 PIM1P11309 404 aaPredicted RBP14.87□□□□□ -0.03
DDX55-209ENST00000542286 HPCAP84074 193 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 TAF10Q12962 218 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 MSLNQ13421 630 aaPredicted RBP14.87□□□□□ -0.03
DDX55-209ENST00000542286 IRF5Q13568 498 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 PPP1R3AQ16821 1122 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 MGAT5BQ3V5L5 792 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 MMEL1Q495T6 779 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 BRMS1LQ5PSV4 323 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 C10orf120Q5SQS8 335 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 SEL1L3Q68CR1 1132 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 KDELC1Q6UW63 502 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 DHDDSQ86SQ9 333 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 NUP93Q8N1F7 819 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 OR13J1Q8NGT2 312 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 HDAC10Q969S8 669 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 RCN3Q96D15 328 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 TSNARE1Q96NA8 513 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 DRC3Q9H069 523 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 UPF3AQ9H1J1 476 aaKnown RBP14.87□□□□□ -0.03
DDX55-209ENST00000542286 S100A14Q9HCY8 104 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 UXTQ9UBK9 157 aaPredicted RBP14.87□□□□□ -0.03
DDX55-209ENST00000542286 AK5Q9Y6K8 562 aa14.87□□□□□ -0.03
DDX55-209ENST00000542286 ATP6AP2A0A1C7CYW4 349 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 SLC12A8A0AV02 714 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 KPNA6O60684 536 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 ATP6AP2O75787 350 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 CPB1P15086 417 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 CD151P48509 253 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 GEMP55040 296 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 AQP4P55087 323 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 CTXN3Q4LDR2 81 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 TMEM207Q6UWW9 146 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 TAS1R1Q7RTX1 841 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 COLGALT2Q8IYK4 626 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 OR52K2Q8NGK3 314 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 LZICQ8WZA0 190 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 RPRD1AQ96P16 312 aaPredicted RBP14.86□□□□□ -0.03
DDX55-209ENST00000542286 NPAS2Q99743 824 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 SP110Q9HB58 689 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 PTTG2Q9NZH5 202 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 DSEQ9UL01 958 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 ARL5AQ9Y689 179 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 UNC80Q8N2C7 3258 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 A0A0D9SEW6 157 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 LRRC14BA6NHZ5 514 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 PPP6CO00743 305 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 TXNDC9O14530 226 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 ENO3P13929 434 aaPredicted RBP14.86□□□□□ -0.03
DDX55-209ENST00000542286 RPL17P18621 184 aaKnown RBP14.86□□□□□ -0.03
DDX55-209ENST00000542286 GLDCP23378 1020 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 HOXC13P31276 330 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 DPP6P42658 865 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 CDKN2DP55273 166 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 CDK18Q07002 472 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 PDK3Q15120 406 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 TMEM259Q4ZIN3 620 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 BLOC1S5Q8TDH9 187 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 FBXO32Q969P5 355 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 DDX18Q9NVP1 670 aaKnown RBP14.86□□□□□ -0.03
DDX55-209ENST00000542286 PCDHB8Q9UN66 801 aa14.86□□□□□ -0.03
DDX55-209ENST00000542286 PRRC2BQ5JSZ5 2229 aaKnown RBP14.85□□□□□ -0.03
DDX55-209ENST00000542286 A0A0J9YVX5 310 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 VILLO15195 856 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 HDAC3O15379 428 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 FGF10O15520 208 aaPredicted RBP14.85□□□□□ -0.03
DDX55-209ENST00000542286 AOC2O75106 756 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 PEX2P28328 305 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 MAGEA10P43363 369 aaPredicted RBP14.85□□□□□ -0.03
DDX55-209ENST00000542286 ACLYP53396 1101 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 MARC1Q5VT66 337 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 CLEC6AQ6EIG7 209 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 RBM44Q6ZP01 1051 aaKnown RBP14.85□□□□□ -0.03
DDX55-209ENST00000542286 TRIM67Q6ZTA4 783 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 ADGRG6Q86SQ4 1221 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 SERPINB11Q96P15 392 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 KLHL4Q9C0H6 718 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 EPB41L1Q9H4G0 881 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms