RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 MATN3O15232 486 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 CCNCP24863 283 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 IGFALSP35858 605 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 GJC1P36383 396 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 MMP13P45452 471 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 YPEL5P62699 121 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 IFI16Q16666 785 aaKnown RBP17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 CFAP58Q5T655 872 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 TIGD7Q6NT04 549 aaPredicted RBP17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 PTAR1Q7Z6K3 402 aaPredicted RBP17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 SLC25A45Q8N413 288 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 CHCHD4Q8N4Q1 142 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 NSMCE1Q8WV22 266 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 WRAP53Q9BUR4 548 aaKnown RBP17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 FTSJ1Q9UET6 329 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 MSRB2Q9Y3D2 182 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 IGF2RP11717 2491 aa17.32■□□□□ 0.36
SFSWAP-205ENST00000537164 TMEM110-MUSTN1A8MSY1 372 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 PIAS2O75928 621 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 CSF2P04141 144 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 C6P13671 934 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 NME1P15531 152 aaKnown RBP17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 SPINK2P20155 84 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 DGKAP23743 735 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 MAGEA1P43355 309 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 LIG3P49916 1009 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 SLC10A2Q12908 348 aaPredicted RBP17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 RALGDSQ12967 914 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 SLC9A4Q6AI14 798 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 DPPA4Q7L190 304 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 PARGQ86W56 976 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 EID2Q8N6I1 236 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 PLD5Q8N7P1 536 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 PNPLA1Q8N8W4 532 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 GATA6Q92908 595 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 HDAC11Q96DB2 347 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 NOD2Q9HC29 1040 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 DTLQ9NZJ0 730 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 PCDHGA1Q9Y5H4 931 aa17.31■□□□□ 0.36
SFSWAP-205ENST00000537164 A0A0A6YYK5 440 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 LDOC1O95751 146 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 C1SP09871 688 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 GIMD1P0DJR0 217 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 MX2P20592 715 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 CES1P23141 567 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 HNRNPKP61978 463 aaKnown RBP eCLIP17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 GBE1Q04446 702 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 PDE1CQ14123 709 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 LRRC14Q15048 493 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 TPRG1LQ5T0D9 272 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 LIPIQ6XZB0 460 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 RHOT1Q8IXI2 618 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 SCUBE2Q9NQ36 999 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 MBNL1Q9NR56 388 aaKnown RBP17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 KLK13Q9UKR3 277 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 PPIL1Q9Y3C6 166 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 PCDHGC4Q9Y5F7 938 aa17.3■□□□□ 0.36
SFSWAP-205ENST00000537164 LRP4O75096 1905 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 TTC24A2A3L6 582 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 LRRD1A4D1F6 860 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 ENC1O14682 589 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 CDK4P11802 303 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 CYLC1P35663 651 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 PEX5P50542 639 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 MAXP61244 160 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 ZNF211Q13398 564 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 PTK2BQ14289 1009 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 TAZQ16635 292 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 WSCD2Q2TBF2 565 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 PROX2Q3B8N5 592 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 TMTC1Q8IUR5 882 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 CBARPQ8N350 705 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 OR4C6Q8NH72 309 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 CNDP2Q96KP4 475 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 POLR1EQ9GZS1 481 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 LUC7LQ9NQ29 371 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 UCKL1Q9NWZ5 548 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 DDX56Q9NY93 547 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 KLF15Q9UIH9 416 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 PHTF1Q9UMS5 762 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 COQ6Q9Y2Z9 468 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 PCDHA13Q9Y5I0 950 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 CSNK1G3Q9Y6M4 447 aa17.29■□□□□ 0.36
SFSWAP-205ENST00000537164 GOLGA4Q13439 2230 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 FZD6O60353 706 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 SDC3O75056 442 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 NDUFA10O95299 355 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 CCNB1P14635 433 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 GM2AP17900 193 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 COMTP21964 271 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 PPIDQ08752 370 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 TRAF2Q12933 501 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 EIF2B5Q13144 721 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 IRF4Q15306 451 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 SPA17Q15506 151 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 ZFYVE27Q5T4F4 411 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 KDM7AQ6ZMT4 941 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 MACC1Q6ZN28 852 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 TMPRSS7Q7RTY8 843 aa17.28■□□□□ 0.36
SFSWAP-205ENST00000537164 TBATAQ96M53 351 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms