RNA–Protein interactions for RNA: ENST00000510921.5

CCNH-208, Transcript of cyclin H, human

TSL 4

Gene CCNH, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNH-208	ENST00000510921	RTN3	O95197	1032 aa	Predicted RBP	3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	TBX18	O95935	607 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	CD4	P01730	458 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	IRF1	P10914	325 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	RYK	P34925	604 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	CCR9	P51686	369 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	EFNA5	P52803	228 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	FAM27E3	Q08E93	113 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	NEXN	Q0ZGT2	675 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	TRAF2	Q12933	501 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	FOXD4	Q12950	439 aa	Predicted RBP	3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	VEPH1	Q14D04	833 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	TAF11	Q15544	211 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	SLC9B1	Q4ZJI4	515 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	PLEKHO1	Q53GL0	409 aa	Predicted RBP	3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	PRAMEF19	Q5SWL8	479 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	ATG9B	Q674R7	924 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	FAAH2	Q6GMR7	532 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	RSRC2	Q7L4I2	434 aa	Known RBP	3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	R3HCC1L	Q7Z5L2	792 aa	Known RBP	3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	PATL1	Q86TB9	770 aa	Known RBP	3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	TBC1D26	Q86UD7	250 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	GPAT4	Q86UL3	456 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	PALB2	Q86YC2	1186 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	LURAP1L	Q8IV03	231 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	RBFA	Q8N0V3	343 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	KLHL15	Q96M94	604 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	C7orf26	Q96N11	449 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	NR1H4	Q96RI1	486 aa	Predicted RBP	3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	POLDIP3	Q9BY77	421 aa	Known RBP	3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	MVB12B	Q9H7P6	319 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	PLSCR4	Q9NRQ2	329 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	IRAK4	Q9NWZ3	460 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	FZD10	Q9ULW2	581 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	CARD8	Q9Y2G2	431 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	PCDHGB1	Q9Y5G3	927 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	SRPRB	Q9Y5M8	271 aa	Known RBP	3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	RAI2	Q9Y5P3	530 aa		3.21	□□□□□ -1.9
CCNH-208	ENST00000510921	KDM3A	Q9Y4C1	1321 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921		A0A1W2PQM1	296 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	TYW5	A2RUC4	315 aa	Known RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	HSPB2	A8KAH6	182 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	MS4A18	H0YCH9	400 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	HEXA	P06865	529 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	PRSS2	P07478	247 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	TFPI	P10646	304 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	MYF6	P23409	242 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	HARS2	P49590	506 aa	Known RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	CTCF	P49711	727 aa	Predicted RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	EIF3B	P55884	814 aa	Known RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	SEC61A1	P61619	476 aa	Known RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	HSPB2	Q16082	182 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	TST	Q16762	297 aa	Known RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	HIST2H2AC	Q16777	129 aa	Predicted RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	TDRD12	Q587J7	1177 aa	Known RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	DCAF6	Q58WW2	860 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	TXNDC8	Q6A555	127 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	SPSB3	Q6PJ21	355 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	ATF7IP	Q6VMQ6	1270 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	ZNF367	Q7RTV3	350 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	C16orf82	Q7Z2V1	217 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	ARMC9	Q7Z3E5	817 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	MAATS1	Q7Z4T9	603 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	FOXP4	Q8IVH2	680 aa	Predicted RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	SFTPA2	Q8IWL1	248 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	KIAA2013	Q8IYS2	634 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	CLIP4	Q8N3C7	705 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	TEX45	Q8NA69	505 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	PPHLN1	Q8NEY8	458 aa	Known RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	METTL6	Q8TCB7	284 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	ADAMTS14	Q8WXS8	1223 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	ZC3HAV1L	Q96H79	300 aa	Known RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	APOLD1	Q96LR9	279 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	BBS4	Q96RK4	519 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	GFM1	Q96RP9	751 aa	Known RBP	3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	YME1L1	Q96TA2	773 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	HEMGN	Q9BXL5	484 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	NUF2	Q9BZD4	464 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	NPFFR1	Q9GZQ6	430 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	UBA5	Q9GZZ9	404 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	PDCL3	Q9H2J4	239 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	SMC4	Q9NTJ3	1288 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	ANKRD10	Q9NXR5	420 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	ICAM5	Q9UMF0	924 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921	NAALADL1	Q9UQQ1	740 aa		3.2	□□□□□ -1.9
CCNH-208	ENST00000510921		A0A0U1RQF3	1178 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	KRTAP9-6	A8MVA2	160 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	VWA5A	O00534	786 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	LDB2	O43679	373 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	LDB3	O75112	727 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	ATP2C2	O75185	946 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	SRD5A1	P18405	259 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	EDN2	P20800	178 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	TNFAIP3	P21580	790 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	GNLY	P22749	145 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	MAN1A1	P33908	653 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	GABRB2	P47870	512 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	COMP	P49747	757 aa	Predicted RBP	3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	PDLIM4	P50479	330 aa		3.19	□□□□□ -1.9
CCNH-208	ENST00000510921	CLCN5	P51795	746 aa		3.19	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms