RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 PAPSS1O43252 624 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 MSI1O43347 362 aaKnown RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 KIF1CO43896 1103 aaKnown RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 MT-CYBP00156 380 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 ABCB1P08183 1280 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 PON1P27169 355 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 YWHAQP27348 245 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 CHRNA5P30532 468 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 PIK3CAP42336 1068 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 TNNT3P45378 269 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 PNLIPRP2P54317 469 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 SIM1P81133 766 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 HOXA4Q00056 320 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 SLC18A2Q05940 514 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 BFSP1Q12934 665 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 IKQ13123 557 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 GALNT3Q14435 633 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 SOWAHCQ53LP3 525 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 CXorf66Q5JRM2 361 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 KIAA1755Q5JYT7 1200 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 ZNF362Q5T0B9 420 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 CPLX2Q6PUV4 134 aaKnown RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 CFAP77Q6ZQR2 320 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 PLPPR4Q7Z2D5 763 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 DHX40Q8IX18 779 aaKnown RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 KIAA2013Q8IYS2 634 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 MINDY1Q8N5J2 469 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 KAT2BQ92831 832 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 VPS33AQ96AX1 596 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 RMDN1Q96DB5 314 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 ELMOD3Q96FG2 381 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 DGAT2Q96PD7 388 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 SRSF8Q9BRL6 282 aaKnown RBP4.68□□□□□ -1.66
VPS13A-211ENST00000484581 NUF2Q9BZD4 464 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 GRPEL1Q9HAV7 217 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 SLC8A2Q9UPR5 921 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 FRMD4BQ9Y2L6 1034 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 FAM96BQ9Y3D0 163 aa4.68□□□□□ -1.66
VPS13A-211ENST00000484581 CXorf65A6NEN9 183 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 FAM157AC9JC47 383 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 H0Y626 953 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 MITFO75030 526 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-211ENST00000484581 TPPPO94811 219 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 PCNAP12004 261 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 IFNAR1P17181 557 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 TACR3P29371 465 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 CENPAP49450 140 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 CLDN2P57739 230 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 TFAP4Q01664 338 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 PPARDQ03181 441 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 ACSM2AQ08AH3 577 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 COG2Q14746 738 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 DRAP1Q14919 205 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-211ENST00000484581 ADIPOQQ15848 244 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 COL28A1Q2UY09 1125 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 ZSCAN23Q3MJ62 389 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 FAM153CQ494X1 144 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 ZNF628Q5EBL2 1059 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 PAPD7Q5XG87 772 aaKnown RBP4.67□□□□□ -1.66
VPS13A-211ENST00000484581 KRT79Q5XKE5 535 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 ACSM2BQ68CK6 577 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 PMS2CLQ68D20 193 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 RBM44Q6ZP01 1051 aaKnown RBP4.67□□□□□ -1.66
VPS13A-211ENST00000484581 SEPT14Q6ZU15 432 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 CHST3Q7LGC8 479 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 TBC1D26Q86UD7 250 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 TDRPQ86YL5 185 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 CEP97Q8IW35 865 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 HACE1Q8IYU2 909 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 OR8H3Q8N146 312 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 APPL2Q8NEU8 664 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 OR4N2Q8NGD1 307 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 AFAP1L1Q8TED9 768 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 WIPF2Q8TF74 440 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-211ENST00000484581 ZKSCAN4Q969J2 545 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-211ENST00000484581 ZNF622Q969S3 477 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13A-211ENST00000484581 PDLIM2Q96JY6 352 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 OR2A14Q96R47 310 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 FCRL5Q96RD9 977 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 TUBB6Q9BUF5 446 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 KIFC3Q9BVG8 833 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 C1QTNF1Q9BXJ1 281 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 HIPK3Q9H422 1215 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 OSGEPL1Q9H4B0 414 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 PLK3Q9H4B4 646 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 ACTR5Q9H9F9 607 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-211ENST00000484581 RANGRFQ9HD47 186 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-211ENST00000484581 SEMA4GQ9NTN9 838 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 SETD4Q9NVD3 440 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 PSD3Q9NYI0 1048 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 SELENONQ9NZV5 590 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 CNOT8Q9UFF9 292 aaKnown RBP4.67□□□□□ -1.66
VPS13A-211ENST00000484581 ANAPC5Q9UJX4 755 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 ANAPC2Q9UJX6 822 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 GTF3C4Q9UKN8 822 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 ST3GAL5Q9UNP4 418 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 PPIEQ9UNP9 301 aaKnown RBP4.67□□□□□ -1.66
VPS13A-211ENST00000484581 FLT1P17948 1338 aa4.67□□□□□ -1.66
VPS13A-211ENST00000484581 TRBC2A0A5B9 178 aa4.66□□□□□ -1.66
VPS13A-211ENST00000484581 POC1B-GALNT4F8VUJ3 575 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms