RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 OXTRP30559 389 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 PTGER3P43115 390 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 CTSOP43234 321 aaPredicted RBP13.4□□□□□ -0.26
BRAT1-205ENST00000473879 SERPINH1P50454 418 aaKnown RBP13.4□□□□□ -0.26
BRAT1-205ENST00000473879 TPMTP51580 245 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 ARL4CP56559 192 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 ZBTB16Q05516 673 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 SLMAPQ14BN4 828 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 HNRNPA1L2Q32P51 320 aaKnown RBP13.4□□□□□ -0.26
BRAT1-205ENST00000473879 AASDHQ4L235 1098 aaPredicted RBP13.4□□□□□ -0.26
BRAT1-205ENST00000473879 PEAR1Q5VY43 1037 aaPredicted RBP13.4□□□□□ -0.26
BRAT1-205ENST00000473879 LYSMD4Q5XG99 296 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 ALG1LQ6GMV1 187 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 FBXO38Q6PIJ6 1188 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 LEKR1Q6ZMV7 388 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 SYT12Q8IV01 421 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 MCUQ8NE86 351 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 FRS2Q8WU20 508 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 PIGKQ92643 395 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 ZNF419Q96HQ0 510 aaPredicted RBP13.4□□□□□ -0.26
BRAT1-205ENST00000473879 PSKH2Q96QS6 385 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 MGME1Q9BQP7 344 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 LRRC40Q9H9A6 602 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 CD93Q9NPY3 652 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 WSB2Q9NYS7 404 aaPredicted RBP13.4□□□□□ -0.26
BRAT1-205ENST00000473879 CDV3Q9UKY7 258 aaKnown RBP13.4□□□□□ -0.26
BRAT1-205ENST00000473879 HS3ST2Q9Y278 367 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 ABCA7Q8IZY2 2146 aa13.4□□□□□ -0.26
BRAT1-205ENST00000473879 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-205ENST00000473879 AP3B1O00203 1094 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 KHNYNO15037 678 aaKnown RBP13.39□□□□□ -0.27
BRAT1-205ENST00000473879 TP73O15350 636 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 EIF3HO15372 352 aaKnown RBP eCLIP13.39□□□□□ -0.27
BRAT1-205ENST00000473879 GDF9O60383 454 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 NDUFS2O75306 463 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 TMEM63AO94886 807 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 AP2A1O95782 977 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 CD160O95971 181 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 HOXD12P35452 270 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 NNMTP40261 264 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 TNNT3P45378 269 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-205ENST00000473879 NUMBP49757 651 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 LIMK1P53667 647 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 RHOAP61586 193 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 RPS14P62263 151 aaKnown RBP13.39□□□□□ -0.27
BRAT1-205ENST00000473879 MPP3Q13368 585 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 SLC14A2Q15849 920 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 HIF1AQ16665 826 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 RALGPS1Q5JS13 557 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 ANKRD22Q5VYY1 191 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 NAPEPLDQ6IQ20 393 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 LINGO4Q6UY18 593 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 CENPUQ71F23 418 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 ARMCX6Q7L4S7 300 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 KLHDC8BQ8IXV7 354 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 PDIK1LQ8N165 341 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 FOXJ1Q92949 421 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 IMP4Q96G21 291 aaKnown RBP13.39□□□□□ -0.27
BRAT1-205ENST00000473879 TOE1Q96GM8 510 aaKnown RBP13.39□□□□□ -0.27
BRAT1-205ENST00000473879 RTKNQ9BST9 563 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 RSPH9Q9H1X1 276 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-205ENST00000473879 SMOC1Q9H4F8 434 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 XAB2Q9HCS7 855 aaKnown RBP13.39□□□□□ -0.27
BRAT1-205ENST00000473879 FAM153AQ9UHL3 310 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 EVLQ9UI08 416 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-205ENST00000473879 SLCO3A1Q9UIG8 710 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 PILRBQ9UKJ0 227 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 CEP250Q9BV73 2442 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 SDK1Q7Z5N4 2213 aa13.39□□□□□ -0.27
BRAT1-205ENST00000473879 EDDM13A0A1B0GTR0 161 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 TCRBV7S3A2A0A539 114 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 TTC34A8MYJ7 566 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 F5H423 210 aaPredicted RBP13.38□□□□□ -0.27
BRAT1-205ENST00000473879 SLC30A4O14863 429 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 ATP9BO43861 1147 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 SIN3BO75182 1162 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 SUN1O94901 812 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 DNTTP04053 509 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 FAM153BP0C7A2 387 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 MLNP12872 115 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 ITPKAP23677 461 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 MAXP61244 160 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 CYTH1Q15438 398 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 FAM153CQ494X1 144 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 DNAJC21Q5F1R6 531 aaKnown RBP13.38□□□□□ -0.27
BRAT1-205ENST00000473879 C9orf64Q5T6V5 341 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 ZNF776Q68DI1 518 aaPredicted RBP13.38□□□□□ -0.27
BRAT1-205ENST00000473879 LINC00523Q86TU6 105 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 CCDC25Q86WR0 208 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 SLC41A1Q8IVJ1 513 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 PGBD5Q8N414 524 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 DEFB119Q8N690 84 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 PDCD7Q8N8D1 485 aaKnown RBP13.38□□□□□ -0.27
BRAT1-205ENST00000473879 ATP11CQ8NB49 1132 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 TSEN2Q8NCE0 465 aaKnown RBP13.38□□□□□ -0.27
BRAT1-205ENST00000473879 CADM4Q8NFZ8 388 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 FAM131CQ96AQ9 280 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 RPL10LQ96L21 214 aaKnown RBP13.38□□□□□ -0.27
BRAT1-205ENST00000473879 RBM15Q96T37 977 aaKnown RBP eCLIP13.38□□□□□ -0.273e-11■■■■■ 37.2
BRAT1-205ENST00000473879 FSD1LQ9BXM9 530 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms