RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 PODXLO00592 558 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 TRDMT1O14717 391 aaKnown RBP7.88□□□□□ -1.15
BRCC3-208ENST00000453705 MED7O43513 233 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 GMFGO60234 142 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 SLC9A1P19634 815 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 PRKACBP22694 351 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 ADSSP30520 456 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 ZNF81P51508 661 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 EFNA5P52803 228 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 ERVK-9P63128 1117 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 CYP24A1Q07973 514 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 IRF3Q14653 427 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 NCF4Q15080 339 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 KCNA10Q16322 511 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 EFHC1Q5JVL4 640 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 SPRYD7Q5W111 196 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 NFRKBQ6P4R8 1299 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 PET117Q6UWS5 81 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.88□□□□□ -1.15
BRCC3-208ENST00000453705 GPD1LQ8N335 351 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 BCAS4Q8TDM0 211 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 GAL3ST3Q96A11 431 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 HES6Q96HZ4 224 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 CEP170P1Q96L14 293 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 FCRL4Q96PJ5 515 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 HHIPQ96QV1 700 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 OSMRQ99650 979 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 GPR20Q99678 358 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 LZTFL1Q9NQ48 299 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 FAM114A2Q9NRY5 505 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 FARSBQ9NSD9 589 aaKnown RBP7.88□□□□□ -1.15
BRCC3-208ENST00000453705 TOR4AQ9NXH8 423 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 INTS6Q9UL03 887 aaKnown RBP7.88□□□□□ -1.15
BRCC3-208ENST00000453705 HYOU1Q9Y4L1 999 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 CCL15-CCL14A0A0B4J2E2 113 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 LOC105371267A0A1B0GV96 52 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 LRRIQ3A6PVS8 624 aaPredicted RBP7.88□□□□□ -1.15
BRCC3-208ENST00000453705 PDE2AO00408 941 aaPredicted RBP7.88□□□□□ -1.15
BRCC3-208ENST00000453705 CHUKO15111 745 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 CLPTM1O96005 669 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 LMNAP02545 664 aaKnown RBP7.88□□□□□ -1.15
BRCC3-208ENST00000453705 MPOP05164 745 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 TMEM253P0C7T8 217 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 IL10P22301 178 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 PROZP22891 400 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 MAMLD1Q13495 774 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 DAG1Q14118 895 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 CCL15Q16663 113 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 PRAMEF14Q5SWL7 426 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 CST9Q5W186 159 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 ZNF571Q7Z3V5 609 aaPredicted RBP7.88□□□□□ -1.15
BRCC3-208ENST00000453705 GPR142Q7Z601 462 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 ZNF677Q86XU0 584 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 PIK3C3Q8NEB9 887 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 MIPOL1Q8TD10 442 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 ATP8B4Q8TF62 1192 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 PSPC1Q8WXF1 523 aaKnown RBP7.88□□□□□ -1.15
BRCC3-208ENST00000453705 FOXJ1Q92949 421 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 RMDN1Q96DB5 314 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 PTCHD1Q96NR3 888 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 MMP19Q99542 508 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 CARD6Q9BX69 1037 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 DENND2DQ9H6A0 471 aaPredicted RBP7.88□□□□□ -1.15
BRCC3-208ENST00000453705 BCAS3Q9H6U6 928 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 OXSMQ9NWU1 459 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 USP36Q9P275 1121 aaKnown RBP7.88□□□□□ -1.15
BRCC3-208ENST00000453705 NAGPAQ9UK23 515 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 TELO2Q9Y4R8 837 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 SAR1BQ9Y6B6 198 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 ADGRA3Q8IWK6 1321 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 A0A0U1RQJ8 604 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 CLIC2O15247 247 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 PLEKP08567 350 aaPredicted RBP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 PRKCAP17252 672 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 GRM5P41594 1212 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 PEX3P56589 373 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 CEBPEQ15744 281 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 SPRED3Q2MJR0 410 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 CBWD6Q4V339 395 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 C3orf38Q5JPI3 329 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 CBWD3Q5JTY5 395 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 ZNF484Q5JVG2 852 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 CBWD5Q5RIA9 395 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 GRTP1Q5TC63 336 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 GARNL3Q5VVW2 1013 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 KRT39Q6A163 491 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 PTCRAQ6ISU1 281 aaPredicted RBP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 ERICH5Q6P6B1 374 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 FAM71AQ8IYT1 594 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 SPARTQ8N0X7 666 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 MPP5Q8N3R9 675 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 HDDC3Q8N4P3 179 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 FRMD1Q8N878 549 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 LRRC57Q8N9N7 239 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 FAM181AQ8N9Y4 354 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 PLEKHO2Q8TD55 490 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 LRRC8CQ8TDW0 803 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 THRSPQ92748 146 aa7.87□□□□□ -1.15
BRCC3-208ENST00000453705 ZNF707Q96C28 371 aaPredicted RBP7.87□□□□□ -1.15
BRCC3-208ENST00000453705 LRRC46Q96FV0 321 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms