RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 LIG3P49916 1009 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 ISXQ2M1V0 245 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 AFMIDQ63HM1 303 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 E4F1Q66K89 784 aaPredicted RBP21.2■□□□□ 0.98
VSX1-206ENST00000444511 CRTC1Q6UUV9 634 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 HID1Q8IV36 788 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 PSTKQ8IV42 348 aaKnown RBP21.2■□□□□ 0.98
VSX1-206ENST00000444511 ARHGAP12Q8IWW6 846 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 SLC35F3Q8IY50 421 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 FSTL5Q8N475 847 aaPredicted RBP21.2■□□□□ 0.98
VSX1-206ENST00000444511 NAT6Q93015 286 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 TRIM11Q96F44 468 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 ZNF578Q96N58 590 aaPredicted RBP21.2■□□□□ 0.98
VSX1-206ENST00000444511 BBC3Q96PG8 261 aaPredicted RBP21.2■□□□□ 0.98
VSX1-206ENST00000444511 LGMNQ99538 433 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 CLPBQ9H078 707 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 POLR1BQ9H9Y6 1135 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 DDX3XO00571 662 aaKnown RBP eCLIP21.19■□□□□ 0.98
VSX1-206ENST00000444511 LRCH4O75427 683 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 PRKCGP05129 697 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 CTSEP14091 401 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 LSSP48449 732 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 ZNF165P49910 485 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 ZNF135P52742 658 aaPredicted RBP21.19■□□□□ 0.98
VSX1-206ENST00000444511 HK3P52790 923 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 BCL2L1Q07817 233 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 INPP5AQ14642 412 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 RFTN1Q14699 578 aaPredicted RBP21.19■□□□□ 0.98
VSX1-206ENST00000444511 ELOCQ15369 112 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 ESRP1Q6NXG1 681 aaKnown RBP21.19■□□□□ 0.98
VSX1-206ENST00000444511 ENPP7Q6UWV6 458 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 RBM44Q6ZP01 1051 aaKnown RBP21.19■□□□□ 0.98
VSX1-206ENST00000444511 ZSWIM9Q86XI8 627 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 NPWQ8N729 165 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 SCG3Q8WXD2 468 aaKnown RBP21.19■□□□□ 0.98
VSX1-206ENST00000444511 TSACCQ96A04 125 aaPredicted RBP21.19■□□□□ 0.98
VSX1-206ENST00000444511 APOOQ9BUR5 198 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 PRORYQ9H606 182 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 MRPL47Q9HD33 250 aaKnown RBP21.19■□□□□ 0.98
VSX1-206ENST00000444511 MYO1AQ9UBC5 1043 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 RAI2Q9Y5P3 530 aa21.19■□□□□ 0.98
VSX1-206ENST00000444511 A0A1B0GTH6 734 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 RASGRP1O95267 797 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 PCCBP05166 539 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 ALPIP09923 528 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 HCAR3P49019 387 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 PCBP4P57723 403 aaKnown RBP21.18■□□□□ 0.98
VSX1-206ENST00000444511 IL10RBQ08334 325 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 NFATC4Q14934 902 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 AGERQ15109 404 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 PERM1Q5SV97 790 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 ARHGAP36Q6ZRI8 547 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 CYP4V2Q6ZWL3 525 aaPredicted RBP21.18■□□□□ 0.98
VSX1-206ENST00000444511 RD3Q7Z3Z2 195 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 ZNF248Q8NDW4 579 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 ATL2Q8NHH9 583 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 NAP1L5Q96NT1 182 aaPredicted RBP21.18■□□□□ 0.98
VSX1-206ENST00000444511 FCRL3Q96P31 734 aaPredicted RBP21.18■□□□□ 0.98
VSX1-206ENST00000444511 UBL7Q96S82 380 aaPredicted RBP21.18■□□□□ 0.98
VSX1-206ENST00000444511 EDEM3Q9BZQ6 932 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 ZWILCHQ9H900 591 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 CWC15Q9P013 229 aaKnown RBP21.18■□□□□ 0.98
VSX1-206ENST00000444511 PADI4Q9UM07 663 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 OR1A2Q9Y585 309 aa21.18■□□□□ 0.98
VSX1-206ENST00000444511 IGSF10Q6WRI0 2623 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 DXOO77932 396 aaKnown RBP21.17■□□□□ 0.98
VSX1-206ENST00000444511 SERPINC1P01008 464 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 CELA2BP08218 269 aaPredicted RBP21.17■□□□□ 0.98
VSX1-206ENST00000444511 MYBL1P10243 752 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 SKILP12757 684 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 POLR2LP62875 67 aaKnown RBP21.17■□□□□ 0.98
VSX1-206ENST00000444511 TLE3Q04726 772 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 NSUN2Q08J23 767 aaKnown RBP eCLIP21.17■□□□□ 0.98
VSX1-206ENST00000444511 MTM1Q13496 603 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 TCEA2Q15560 299 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 ALG11Q2TAA5 492 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 CAVIN1Q6NZI2 390 aaKnown RBP21.17■□□□□ 0.98
VSX1-206ENST00000444511 SPACA3Q8IXA5 215 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 LZTR1Q8N653 840 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 WDR48Q8TAF3 677 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 GRAMD1AQ96CP6 724 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 NAF1Q96HR8 494 aaKnown RBP21.17■□□□□ 0.98
VSX1-206ENST00000444511 GULP1Q9UBP9 304 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 KLQ9UEF7 1012 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 SEPT3Q9UH03 358 aa21.17■□□□□ 0.98
VSX1-206ENST00000444511 CFAP69A5D8W1 941 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 H3BRJ5 948 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 TCEA3O75764 348 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 PCK1P35558 622 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 ARL4AP40617 200 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 SCNN1BP51168 640 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 RENBPP51606 427 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 ERVPABLB-1P60509 514 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 SRP54P61011 504 aaKnown RBP21.16■□□□□ 0.98
VSX1-206ENST00000444511 AP1S1P61966 158 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 DPYSQ14117 519 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 LBRQ14739 615 aaKnown RBP21.16■□□□□ 0.98
VSX1-206ENST00000444511 C3orf38Q5JPI3 329 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 TMCO4Q5TGY1 634 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 LVRNQ6Q4G3 990 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms