RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 TRUB2O95900 331 aaKnown RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 AK1P00568 194 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 SRPRAP08240 638 aaKnown RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 KRT5P13647 590 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 ACHEP22303 614 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 FMO4P31512 558 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 SFNP31947 248 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 CTNNB1P35222 781 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 SLC16A2P36021 539 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 GCLCP48506 637 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 GATMP50440 423 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 ST8SIA6P61647 398 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 CYP4F8P98187 520 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 IL24Q13007 206 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 BYSLQ13895 437 aaKnown RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 CBFBQ13951 182 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 SLC39A14Q15043 492 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 SLC18A3Q16572 532 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 AARDQ4LEZ3 155 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 NOMO2Q5JPE7 1267 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 SLC9A4Q6AI14 798 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 HMBOX1Q6NT76 420 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 RBM43Q6ZSC3 357 aaKnown RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 AMIGO3Q86WK7 504 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 ELOA2Q8IYF1 753 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 KDM8Q8N371 416 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 RASGEF1CQ8N431 466 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 PDCL2Q8N4E4 241 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 ANKRD53Q8N9V6 530 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 HJURPQ8NCD3 748 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 PSD4Q8NDX1 1056 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 NSUN7Q8NE18 718 aaKnown RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 MNS1Q8NEH6 495 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 PSMA8Q8TAA3 256 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 TBC1D15Q8TC07 691 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 LPGAT1Q92604 370 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 THRSPQ92748 146 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 PABPC5Q96DU9 382 aaKnown RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 TRMT61AQ96FX7 289 aaKnown RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 TMEM176AQ96HP8 235 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 HS6ST2Q96MM7 605 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 SEMA3CQ99985 751 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 SYT3Q9BQG1 590 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 CARD6Q9BX69 1037 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 SLC7A5P2Q9GIP4 190 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 SIK2Q9H0K1 926 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 PDZD7Q9H5P4 517 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 WDR26Q9H7D7 661 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 CNOT10Q9H9A5 744 aaKnown RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 TUFT1Q9NNX1 390 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 PRMT8Q9NR22 394 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 DLL4Q9NR61 685 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 SLC6A13Q9NSD5 602 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 CENPMQ9NSP4 180 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 FAM212BQ9NTI7 297 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 DNAJC17Q9NVM6 304 aaKnown RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 TMOD3Q9NYL9 352 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 VSX1Q9NZR4 365 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 CWC15Q9P013 229 aaKnown RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 TLK1Q9UKI8 766 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 VAV3Q9UKW4 847 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 PLA2G2DQ9UNK4 145 aa5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 UBE2J1Q9Y385 318 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P10-201ENST00000434734 TMEM94Q12767 1356 aa5.4□□□□□ -1.55
HMGB3P10-201ENST00000434734 FITM1A5D6W6 292 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 LRRC53A6NM62 1247 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 O00370 1275 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 POLRMTO00411 1230 aaKnown RBP5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 BIN1O00499 593 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 RASGRF2O14827 1237 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 SRGAP3O43295 1099 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 MT-ATP6P00846 226 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 CYBBP04839 570 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 CSF1RP07333 972 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 IL7RP16871 459 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 JUNBP17275 347 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 CTPS1P17812 591 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 ITIH1P19827 911 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 TCEA1P23193 301 aaKnown RBP5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 LRPAP1P30533 357 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 KIR2DL3P43628 341 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 PXNP49023 591 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 CLCN3P51790 818 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 UCP2P55851 309 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 LOXL3P58215 753 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 UBE2HP62256 183 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 TIAL1Q01085 375 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 PRKCQQ04759 706 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 GABPB1Q06547 395 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 KLF10Q13118 480 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 GPM6BQ13491 265 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 IL13RA2Q14627 380 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 RRP1BQ14684 758 aaKnown RBP5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 RTP5Q14D33 572 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 CCDC142Q17RM4 750 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 COL28A1Q2UY09 1125 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 DNTTIP2Q5QJE6 756 aaKnown RBP5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 FAM91A1Q658Y4 838 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 ANKS6Q68DC2 871 aa5.39□□□□□ -1.55
HMGB3P10-201ENST00000434734 PLA2G4FQ68DD2 849 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms