RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 SEMA3CQ99985 751 aa11.15□□□□□ -0.62
KNOP1-201ENST00000219837 DCUN1D5Q9BTE7 237 aa11.15□□□□□ -0.62
KNOP1-201ENST00000219837 SLC25A23Q9BV35 468 aa11.15□□□□□ -0.62
KNOP1-201ENST00000219837 GDF3Q9NR23 364 aa11.15□□□□□ -0.62
KNOP1-201ENST00000219837 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
KNOP1-201ENST00000219837 MAPRE3Q9UPY8 281 aa11.15□□□□□ -0.62
KNOP1-201ENST00000219837 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.15□□□□□ -0.62
KNOP1-201ENST00000219837 QSOX1O00391 747 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 KPNA4O00629 521 aaPredicted RBP11.15□□□□□ -0.63
KNOP1-201ENST00000219837 CYP3A4P08684 503 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 TFPIP10646 304 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 CACNA2D1P54289 1103 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 IFI35P80217 286 aaPredicted RBP11.15□□□□□ -0.63
KNOP1-201ENST00000219837 TBC1D25Q3MII6 688 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 PPP1R26Q5T8A7 1209 aaPredicted RBP11.15□□□□□ -0.63
KNOP1-201ENST00000219837 MOB2Q70IA6 237 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 ITCHQ96J02 903 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 HIPK3Q9H422 1215 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 NRDE2Q9H7Z3 1164 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 CD84Q9UIB8 345 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 MRTO4Q9UKD2 239 aaKnown RBP11.15□□□□□ -0.63
KNOP1-201ENST00000219837 ZMYND8Q9ULU4 1186 aaPredicted RBP11.15□□□□□ -0.63
KNOP1-201ENST00000219837 ASF1AQ9Y294 204 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 KIAA1210Q9ULL0 1709 aa11.15□□□□□ -0.63
KNOP1-201ENST00000219837 ERAL1O75616 437 aaKnown RBP11.14□□□□□ -0.63
KNOP1-201ENST00000219837 CYP2C18P33260 490 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 WASP42768 502 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 GPRIN3Q6ZVF9 776 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 DHRSXQ8N5I4 330 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ALLCQ8N6M5 410 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ATP6V1C2Q8NEY4 427 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 BPIFB6Q8NFQ5 453 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 KCTD4Q8WVF5 259 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 CLCC1Q96S66 551 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 GRIP2Q9C0E4 1043 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ZNF222Q9UK12 451 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 PTPRJQ12913 1337 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 FAM25EA8MYX2 175 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 PDE2AO00408 941 aaPredicted RBP11.14□□□□□ -0.63
KNOP1-201ENST00000219837 TIPRLO75663 272 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ITGA2P17301 1181 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 MYL9P24844 172 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ITPKBP27987 946 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 RPL3P39023 403 aaKnown RBP11.14□□□□□ -0.63
KNOP1-201ENST00000219837 SPIRE1Q08AE8 756 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 EPS8Q12929 822 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 CHADLQ6NUI6 762 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 NEK5Q6P3R8 708 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 TSHZ1Q6ZSZ6 1077 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 UBE2R2Q712K3 238 aaPredicted RBP11.14□□□□□ -0.63
KNOP1-201ENST00000219837 CHST9Q7L1S5 443 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 OR4L1Q8NH43 312 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ATXN2LQ8WWM7 1075 aaKnown RBP11.14□□□□□ -0.63
KNOP1-201ENST00000219837 KAT5Q92993 513 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 TRAPPC9Q96Q05 1148 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ADAM28Q9UKQ2 775 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 CNTNAP1P78357 1384 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 E7ENQ6 273 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 DDX3XO00571 662 aaKnown RBP eCLIP11.14□□□□□ -0.639e-7■□□□□ 10
KNOP1-201ENST00000219837 TNFAIP8O95379 198 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 MMP3P08254 477 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 SCRN3Q0VDG4 424 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 CDKAL1Q5VV42 579 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 TRPV3Q8NET8 790 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 Q96MT0 163 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ANKZF1Q9H8Y5 726 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 CAB39LQ9H9S4 337 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 EQTNQ9NQ60 294 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 NDUFA13Q9P0J0 144 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 PCDHGC5Q9Y5F6 944 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 MROH2AA6NES4 1674 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 PROCP04070 461 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 GIMD1P0DJR0 217 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 EIF2B2P49770 351 aaKnown RBP11.14□□□□□ -0.63
KNOP1-201ENST00000219837 UNC5AQ6ZN44 842 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 HPS6Q86YV9 775 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 DNAJB14Q8TBM8 379 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 PYDC1Q8WXC3 89 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 AARSD1Q9BTE6 412 aaKnown RBP11.14□□□□□ -0.63
KNOP1-201ENST00000219837 BRINP2Q9C0B6 783 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 EPB41L1Q9H4G0 881 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 LIASO43766 372 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ZMPSTE24O75844 475 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 TCEA1P23193 301 aaKnown RBP11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ST3GAL1Q11201 340 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 UBAP2LQ14157 1087 aaKnown RBP11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ANXA8L1Q5VT79 327 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 TXNDC11Q6PKC3 985 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 EXOC3L1Q86VI1 746 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 MCEMP1Q8IX19 187 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ULK2Q8IYT8 1036 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 NETO2Q8NC67 525 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 TRPM4Q8TD43 1214 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 MTMR8Q96EF0 704 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ZFRQ96KR1 1074 aaKnown RBP11.14□□□□□ -0.63
KNOP1-201ENST00000219837 PPP3R2Q96LZ3 170 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 C1orf50Q9BV19 199 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 GMPPBQ9Y5P6 360 aa11.14□□□□□ -0.63
KNOP1-201ENST00000219837 ATXN2Q99700 1313 aaKnown RBP11.14□□□□□ -0.63
KNOP1-201ENST00000219837 TRBV23OR9-2A0A075B6M9 112 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms