RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	GUT2	P32191	649 aa		3.05	□□□□□ -1.92
VTC3	YPL019C	SUV3	P32580	737 aa		3.05	□□□□□ -1.92
VTC3	YPL019C	MOT2	P34909	587 aa	Known RBP	3.05	□□□□□ -1.92
VTC3	YPL019C	STV1	P37296	890 aa		3.05	□□□□□ -1.92
VTC3	YPL019C	APE3	P37302	537 aa	Known RBP	3.05	□□□□□ -1.92
VTC3	YPL019C	BOL3	P39724	118 aa		3.05	□□□□□ -1.92
VTC3	YPL019C	MAM1	P40065	302 aa		3.05	□□□□□ -1.92
VTC3	YPL019C	MDJ2	P42834	146 aa		3.05	□□□□□ -1.92
VTC3	YPL019C	ELP4	Q02884	456 aa	Known RBP	3.05	□□□□□ -1.92
VTC3	YPL019C	YEL077C	Q3E7X8	1277 aa		3.05	□□□□□ -1.92
VTC3	YPL019C	PHO87	P25360	923 aa		3.05	□□□□□ -1.92
VTC3	YPL019C	PTC2	P39966	464 aa	Known RBP	3.05	□□□□□ -1.92
VTC3	YPL019C	POL5	P39985	1022 aa	Known RBP	3.05	□□□□□ -1.92
VTC3	YPL019C	GAS5	Q08193	484 aa		3.05	□□□□□ -1.92
VTC3	YPL019C	YBL113C	Q7M4S9	792 aa		3.05	□□□□□ -1.92
VTC3	YPL019C	CBP1	P07252	654 aa		3.04	□□□□□ -1.92
VTC3	YPL019C	PRE3	P38624	215 aa		3.04	□□□□□ -1.92
VTC3	YPL019C	PNT1	P38969	423 aa		3.04	□□□□□ -1.92
VTC3	YPL019C	ICP55	P40051	511 aa		3.04	□□□□□ -1.92
VTC3	YPL019C	ZDS2	P54786	942 aa		3.04	□□□□□ -1.92
VTC3	YPL019C	RBA50	Q04418	439 aa		3.04	□□□□□ -1.92
VTC3	YPL019C	RRP15	Q06511	250 aa	Predicted RBP	3.04	□□□□□ -1.92
VTC3	YPL019C	BMS1	Q08965	1183 aa	Known RBP	3.04	□□□□□ -1.92
VTC3	YPL019C	PAM1	P37304	830 aa	Known RBP	3.04	□□□□□ -1.92
VTC3	YPL019C	RRP46	P53256	223 aa	Predicted RBP	3.04	□□□□□ -1.92
VTC3	YPL019C	DNM1	P54861	757 aa		3.04	□□□□□ -1.92
VTC3	YPL019C	PRP42	Q03776	544 aa	Known RBP	3.04	□□□□□ -1.92
VTC3	YPL019C	UTP13	Q05946	817 aa	Known RBP	3.04	□□□□□ -1.92
VTC3	YPL019C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
VTC3	YPL019C	COQ4	O13525	335 aa		3.03	□□□□□ -1.92
VTC3	YPL019C	RTR1	P40084	226 aa	Predicted RBP	3.03	□□□□□ -1.92
VTC3	YPL019C	GSM1	P42950	618 aa		3.03	□□□□□ -1.92
VTC3	YPL019C	YOL057W	Q08225	711 aa		3.03	□□□□□ -1.92
VTC3	YPL019C	WHI5	Q12416	295 aa		3.03	□□□□□ -1.92
VTC3	YPL019C	VPS13	Q07878	3144 aa		3.03	□□□□□ -1.92
VTC3	YPL019C	PRD1	P25375	712 aa		3.03	□□□□□ -1.92
VTC3	YPL019C	VRP1	P37370	817 aa		3.03	□□□□□ -1.92
VTC3	YPL019C	KXD1	P53158	218 aa		3.03	□□□□□ -1.92
VTC3	YPL019C	RPT4	P53549	437 aa	Known RBP	3.03	□□□□□ -1.92
VTC3	YPL019C	PUF6	Q04373	656 aa	Known RBP	3.03	□□□□□ -1.92
VTC3	YPL019C	ATE1	P16639	503 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	BOI1	P38041	980 aa	Known RBP	3.02	□□□□□ -1.93
VTC3	YPL019C	MAL31	P38156	614 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	NIT1	P40447	199 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	FCP1	Q03254	732 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	ISR1	Q06098	443 aa	Known RBP	3.02	□□□□□ -1.93
VTC3	YPL019C	ACK1	Q07622	623 aa	Predicted RBP	3.02	□□□□□ -1.93
VTC3	YPL019C	TSC13	Q99190	310 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	RRN6	P32786	894 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	YBR287W	P38355	427 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	SPL2	P38839	148 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	CST6	P40535	587 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	SGD1	Q06132	899 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	HDA3	Q06623	655 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	PSF3	Q12146	194 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	SAC3	P46674	1301 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	FLO11	P08640	1367 aa		3.02	□□□□□ -1.93
VTC3	YPL019C	HAP4	P14064	554 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	HEM3	P28789	327 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	MGM1	P32266	881 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	SPR3	P41901	512 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	YJR008W	P47085	338 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	GYP7	P48365	746 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	IOC4	Q04213	475 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	PNP1	Q05788	311 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	YLR225C	Q05948	407 aa	Known RBP	3.01	□□□□□ -1.93
VTC3	YPL019C	THI3	Q07471	609 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	MSC6	Q08818	692 aa	Known RBP	3.01	□□□□□ -1.93
VTC3	YPL019C	FRT1	Q99332	602 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	TAO3	P40468	2376 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	SUP35	P05453	685 aa	Known RBP	3.01	□□□□□ -1.93
VTC3	YPL019C	ARG82	P07250	355 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	NGR1	P32831	672 aa	Known RBP	3.01	□□□□□ -1.93
VTC3	YPL019C	KTR2	P33550	425 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	ASH1	P34233	588 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	SLD2	P34252	453 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	YHL050C	P38721	697 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	YHR219W	P38900	624 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	UTP7	P40055	554 aa	Known RBP	3.01	□□□□□ -1.93
VTC3	YPL019C	MTC3	P53077	123 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	SWI1	P09547	1314 aa		3.01	□□□□□ -1.93
VTC3	YPL019C	MIP1	P15801	1254 aa		3	□□□□□ -1.93
VTC3	YPL019C	RPS7A	P26786	190 aa	Known RBP	3	□□□□□ -1.93
VTC3	YPL019C	NUP133	P36161	1157 aa		3	□□□□□ -1.93
VTC3	YPL019C	JJJ2	P46997	583 aa		3	□□□□□ -1.93
VTC3	YPL019C	ITC1	P53125	1264 aa		3	□□□□□ -1.93
VTC3	YPL019C	KAR5	Q04746	504 aa		3	□□□□□ -1.93
VTC3	YPL019C	FBP1	P09201	348 aa		3	□□□□□ -1.93
VTC3	YPL019C	SPT16	P32558	1035 aa	Known RBP	3	□□□□□ -1.93
VTC3	YPL019C	PAH1	P32567	862 aa		3	□□□□□ -1.93
VTC3	YPL019C	NUG1	P40010	520 aa	Known RBP	3	□□□□□ -1.93
VTC3	YPL019C	AIM9	P40053	627 aa	Known RBP	3	□□□□□ -1.93
VTC3	YPL019C	EMW1	P42842	904 aa	Known RBP	3	□□□□□ -1.93
VTC3	YPL019C	BDP1	P46678	594 aa		3	□□□□□ -1.93
VTC3	YPL019C	IRC4	Q03036	179 aa		3	□□□□□ -1.93
VTC3	YPL019C	MTC5	Q03897	1148 aa		3	□□□□□ -1.93
VTC3	YPL019C	WRS1	Q12109	432 aa	Known RBP	3	□□□□□ -1.93
VTC3	YPL019C	PSH1	Q12161	406 aa		3	□□□□□ -1.93
VTC3	YPL019C	GIN4	Q12263	1142 aa		3	□□□□□ -1.93
VTC3	YPL019C	LCB1	P25045	558 aa	Known RBP	2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms