RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W GTS1P40956 396 aa3.86□□□□□ -1.79
PFD1YJL179W PYC2P32327 1180 aaKnown RBP3.85□□□□□ -1.79
PFD1YJL179W TRM2P33753 639 aa3.85□□□□□ -1.79
PFD1YJL179W MPT5P39016 859 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
PFD1YJL179W FOL2P51601 243 aaKnown RBP3.85□□□□□ -1.79
PFD1YJL179W ECM23Q02710 187 aa3.85□□□□□ -1.79
PFD1YJL179W SMY2P32909 740 aaKnown RBP3.84□□□□□ -1.79
PFD1YJL179W TGL4P36165 910 aa3.84□□□□□ -1.79
PFD1YJL179W TAT2P38967 592 aa3.84□□□□□ -1.79
PFD1YJL179W MEC3Q02574 474 aa3.84□□□□□ -1.79
PFD1YJL179W TIF6Q12522 245 aaKnown RBP3.84□□□□□ -1.79
PFD1YJL179W IRS4P36115 615 aaKnown RBP3.83□□□□□ -1.8
PFD1YJL179W RAD55P38953 406 aa3.83□□□□□ -1.8
PFD1YJL179W PSY2P40164 858 aa3.83□□□□□ -1.8
PFD1YJL179W UBX7P38349 436 aa3.82□□□□□ -1.8
PFD1YJL179W MSE1P48525 536 aa3.82□□□□□ -1.8
PFD1YJL179W HTS1P07263 546 aaKnown RBP3.81□□□□□ -1.8
PFD1YJL179W NNK1P36003 928 aa3.81□□□□□ -1.8
PFD1YJL179W REI1P38344 393 aaPredicted RBP3.81□□□□□ -1.8
PFD1YJL179W HGH1P48362 394 aaKnown RBP3.81□□□□□ -1.8
PFD1YJL179W PUF6Q04373 656 aaKnown RBP3.81□□□□□ -1.8
PFD1YJL179W PUN1Q06991 263 aa3.81□□□□□ -1.8
PFD1YJL179W ALG6Q12001 544 aaKnown RBP3.81□□□□□ -1.8
PFD1YJL179W SUT1P53032 299 aaKnown RBP3.8□□□□□ -1.8
PFD1YJL179W SLI1P53304 468 aa3.8□□□□□ -1.8
PFD1YJL179W SMC1P32908 1225 aa3.79□□□□□ -1.8
PFD1YJL179W URN1Q06525 465 aaKnown RBP3.79□□□□□ -1.8
PFD1YJL179W SRS2P12954 1174 aa3.78□□□□□ -1.8
PFD1YJL179W KTR2P33550 425 aa3.78□□□□□ -1.8
PFD1YJL179W UTP22P53254 1237 aaPredicted RBP3.78□□□□□ -1.8
PFD1YJL179W YDR132CQ03900 495 aa3.78□□□□□ -1.8
PFD1YJL179W APC11Q12157 165 aa3.78□□□□□ -1.8
PFD1YJL179W YGR045CP53229 120 aa3.77□□□□□ -1.81
PFD1YJL179W ELA1P53861 379 aaPredicted RBP3.77□□□□□ -1.81
PFD1YJL179W CTF4Q01454 927 aa3.77□□□□□ -1.81
PFD1YJL179W PUS7Q08647 676 aaKnown RBP3.77□□□□□ -1.81
PFD1YJL179W RAD53P22216 821 aa3.76□□□□□ -1.81
PFD1YJL179W SPT20P50875 604 aa3.76□□□□□ -1.81
PFD1YJL179W YOR352WQ08816 343 aa3.76□□□□□ -1.81
PFD1YJL179W NPR1P22211 790 aa3.75□□□□□ -1.81
PFD1YJL179W SNM1P40993 198 aa3.75□□□□□ -1.81
PFD1YJL179W ENV11P53246 860 aa3.75□□□□□ -1.81
PFD1YJL179W AVO1Q08236 1176 aa3.75□□□□□ -1.81
PFD1YJL179W PRP5P21372 849 aaPredicted RBP3.74□□□□□ -1.81
PFD1YJL179W RRN6P32786 894 aa3.74□□□□□ -1.81
PFD1YJL179W MDL2P33311 773 aa3.74□□□□□ -1.81
PFD1YJL179W ARL1P38116 183 aaKnown RBP3.74□□□□□ -1.81
PFD1YJL179W TPP1Q03796 238 aa3.74□□□□□ -1.81
PFD1YJL179W RIM11P38615 370 aa3.73□□□□□ -1.81
PFD1YJL179W YHL012WP38709 493 aa3.73□□□□□ -1.81
PFD1YJL179W CMR1Q12510 522 aaKnown RBP3.73□□□□□ -1.81
PFD1YJL179W SAM35P14693 329 aa3.72□□□□□ -1.81
PFD1YJL179W SUN4P53616 420 aa3.72□□□□□ -1.81
PFD1YJL179W CTR9P89105 1077 aa3.72□□□□□ -1.81
PFD1YJL179W GCN5Q03330 439 aa3.72□□□□□ -1.81
PFD1YJL179W SGD1Q06132 899 aa3.72□□□□□ -1.81
PFD1YJL179W HCM1P25364 564 aa3.71□□□□□ -1.82
PFD1YJL179W MEF2P39677 819 aa3.71□□□□□ -1.82
PFD1YJL179W PMI40P29952 429 aaKnown RBP3.7□□□□□ -1.82
PFD1YJL179W ECM2P38241 364 aaKnown RBP3.7□□□□□ -1.82
PFD1YJL179W LAM1P38851 1228 aa3.7□□□□□ -1.82
PFD1YJL179W RQC2Q12532 1038 aaKnown RBP3.7□□□□□ -1.82
PFD1YJL179W RPB10P22139 70 aa3.69□□□□□ -1.82
PFD1YJL179W AIM26P32858 118 aa3.69□□□□□ -1.82
PFD1YJL179W DOM34P33309 386 aa3.69□□□□□ -1.82
PFD1YJL179W TTI1P36097 1038 aa3.69□□□□□ -1.82
PFD1YJL179W AIM21P40563 679 aa3.69□□□□□ -1.82
PFD1YJL179W PUF4P25339 888 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
PFD1YJL179W SRO9P25567 434 aaKnown RBP3.68□□□□□ -1.82
PFD1YJL179W COBP00163 385 aa3.67□□□□□ -1.82
PFD1YJL179W STE11P23561 717 aa3.67□□□□□ -1.82
PFD1YJL179W CHS7P38843 316 aa3.67□□□□□ -1.82
PFD1YJL179W HNT2P49775 206 aa3.67□□□□□ -1.82
PFD1YJL179W NTO1Q12311 748 aa3.67□□□□□ -1.82
PFD1YJL179W MNN10P50108 393 aaKnown RBP3.66□□□□□ -1.82
PFD1YJL179W CWC15Q03772 175 aaKnown RBP3.66□□□□□ -1.82
PFD1YJL179W SPS1P08458 490 aa3.65□□□□□ -1.83
PFD1YJL179W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83 RIP-Chip
PFD1YJL179W LSO1Q3E827 93 aa3.65□□□□□ -1.83
PFD1YJL179W RET1P22276 1149 aaKnown RBP3.64□□□□□ -1.83
PFD1YJL179W PNP1Q05788 311 aa3.64□□□□□ -1.83
PFD1YJL179W YLR257WQ06146 321 aaKnown RBP3.64□□□□□ -1.83
PFD1YJL179W HRK1Q08732 759 aaKnown RBP3.64□□□□□ -1.83
PFD1YJL179W DUR3P33413 735 aa3.63□□□□□ -1.83
PFD1YJL179W MCM6P53091 1017 aaKnown RBP3.63□□□□□ -1.83
PFD1YJL179W BDF2Q07442 638 aa3.63□□□□□ -1.83
PFD1YJL179W NBA1Q08229 501 aaKnown RBP3.63□□□□□ -1.83
PFD1YJL179W SAP155P43612 1002 aa3.62□□□□□ -1.83
PFD1YJL179W DUS4Q06063 367 aa3.62□□□□□ -1.83
PFD1YJL179W TY1A-LR4P0C2I8 440 aaKnown RBP3.61□□□□□ -1.83
PFD1YJL179W TY1A-DR6P0CX70 440 aa3.61□□□□□ -1.83
PFD1YJL179W TY1A-ER1P0CX71 440 aa3.61□□□□□ -1.83
PFD1YJL179W TY1A-LR2P0CX72 440 aa3.61□□□□□ -1.83
PFD1YJL179W TY1A-PLP0CX73 440 aa3.61□□□□□ -1.83
PFD1YJL179W TY1A-JR1P0CX74 440 aa3.61□□□□□ -1.83
PFD1YJL179W TY1A-LR3P0CX75 440 aa3.61□□□□□ -1.83
PFD1YJL179W TY1A-ML2P0CX76 440 aa3.61□□□□□ -1.83
PFD1YJL179W PUP1P25043 261 aa3.61□□□□□ -1.83
PFD1YJL179W HSE1P38753 452 aa3.61□□□□□ -1.83
PFD1YJL179W YAR028WP39548 234 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms