RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	MRF1	P30775	413 aa	Predicted RBP	5.12	□□□□□ -1.59
PAN1	YIR006C	RPC17	P47076	161 aa		5.12	□□□□□ -1.59
PAN1	YIR006C	ENV11	P53246	860 aa		5.12	□□□□□ -1.59
PAN1	YIR006C	TOF1	P53840	1238 aa		5.12	□□□□□ -1.59
PAN1	YIR006C	GIS4	Q04233	774 aa		5.12	□□□□□ -1.59
PAN1	YIR006C	YOR296W	Q08748	1289 aa		5.12	□□□□□ -1.59
PAN1	YIR006C	CEX1	Q12453	761 aa		5.12	□□□□□ -1.59
PAN1	YIR006C	IML1	P47170	1584 aa		5.12	□□□□□ -1.59
PAN1	YIR006C	MAD1	P40957	749 aa		5.12	□□□□□ -1.59
PAN1	YIR006C	NUP192	P47054	1683 aa		5.12	□□□□□ -1.59
PAN1	YIR006C	SWH1	P35845	1188 aa		5.11	□□□□□ -1.59
PAN1	YIR006C	MAL33	P38157	468 aa		5.11	□□□□□ -1.59
PAN1	YIR006C	SPP382	Q06411	708 aa	Predicted RBP	5.11	□□□□□ -1.59
PAN1	YIR006C	SLK19	Q08581	821 aa	Known RBP	5.11	□□□□□ -1.59
PAN1	YIR006C	POL3	P15436	1097 aa		5.11	□□□□□ -1.59
PAN1	YIR006C	RPO26	P20435	155 aa		5.11	□□□□□ -1.59
PAN1	YIR006C	GSM1	P42950	618 aa		5.11	□□□□□ -1.59
PAN1	YIR006C	SPO19	Q03029	223 aa		5.11	□□□□□ -1.59
PAN1	YIR006C	KAR3	P17119	729 aa		5.11	□□□□□ -1.59
PAN1	YIR006C	GCD7	P32502	381 aa	Predicted RBP	5.11	□□□□□ -1.59
PAN1	YIR006C	BOI1	P38041	980 aa	Known RBP	5.11	□□□□□ -1.59
PAN1	YIR006C	RPL8A	P17076	256 aa	Known RBP	5.11	□□□□□ -1.59
PAN1	YIR006C	APL1	P27351	700 aa		5.11	□□□□□ -1.59
PAN1	YIR006C	RPL8B	P29453	256 aa	Known RBP	5.11	□□□□□ -1.59
PAN1	YIR006C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
PAN1	YIR006C	AAP1	P37898	856 aa	Known RBP	5.11	□□□□□ -1.59
PAN1	YIR006C	AKR1	P39010	764 aa		5.11	□□□□□ -1.59
PAN1	YIR006C	HYR1	P40581	163 aa	Known RBP	5.11	□□□□□ -1.59
PAN1	YIR006C	SPO21	Q12411	609 aa		5.11	□□□□□ -1.59
PAN1	YIR006C	PSO2	P30620	661 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	CTM1	P38818	585 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	SAK1	P38990	1142 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	ILV3	P39522	585 aa	Known RBP	5.1	□□□□□ -1.59
PAN1	YIR006C	ZPR1	P53303	486 aa	Known RBP	5.1	□□□□□ -1.59
PAN1	YIR006C	VAC14	Q06708	880 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	TAH18	Q12181	623 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	GYP5	Q12344	894 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	UBC1	P21734	215 aa	Known RBP	5.1	□□□□□ -1.59
PAN1	YIR006C	EFT1	P32324	842 aa	Known RBP	5.1	□□□□□ -1.59
PAN1	YIR006C	ZUO1	P32527	433 aa	Known RBP	5.1	□□□□□ -1.59
PAN1	YIR006C	LYS2	P07702	1392 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	MPH3	P0CE00	602 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	THR4	P16120	514 aa	Known RBP	5.1	□□□□□ -1.59
PAN1	YIR006C	YEL043W	P32618	956 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	BMH2	P34730	273 aa	Known RBP	5.1	□□□□□ -1.59
PAN1	YIR006C	ATG19	P35193	415 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	PSY2	P40164	858 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	MRPS35	P53292	345 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	WAR1	Q03631	944 aa		5.1	□□□□□ -1.59
PAN1	YIR006C	YIR042C	P40586	236 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	YGL140C	P53120	1219 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	ADE16	P54113	591 aa	Known RBP	5.09	□□□□□ -1.59
PAN1	YIR006C	YPR078C	Q06813	372 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	AIM7	Q12156	149 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	BUG1	Q12191	341 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	OPI1	P21957	404 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	GSY2	P27472	705 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	RAM2	P29703	316 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	FBP26	P32604	452 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	CNS1	P33313	385 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	VPS45	P38932	577 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	ALO1	P54783	526 aa	Known RBP	5.09	□□□□□ -1.59
PAN1	YIR006C	RIX7	Q07844	837 aa	Known RBP	5.09	□□□□□ -1.59
PAN1	YIR006C	YPL216W	Q08964	1102 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	HAT1	Q12341	374 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	SEY1	Q99287	776 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	RPC19	P28000	142 aa	Known RBP	5.09	□□□□□ -1.59
PAN1	YIR006C	YKL023W	P36103	277 aa	Known RBP	5.09	□□□□□ -1.59
PAN1	YIR006C	RPN3	P40016	523 aa	Known RBP	5.09	□□□□□ -1.59
PAN1	YIR006C	VID27	P40157	782 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	ILM1	P47155	203 aa		5.09	□□□□□ -1.59
PAN1	YIR006C	LCB5	Q06147	687 aa	Known RBP	5.09	□□□□□ -1.59
PAN1	YIR006C	DIB1	Q06819	143 aa	Predicted RBP	5.09	□□□□□ -1.59
PAN1	YIR006C	PET111	P08468	800 aa		5.09	□□□□□ -1.6
PAN1	YIR006C	RIT1	P23796	513 aa		5.09	□□□□□ -1.6
PAN1	YIR006C	VPS30	Q02948	557 aa		5.09	□□□□□ -1.6
PAN1	YIR006C	INM2	Q05533	292 aa		5.09	□□□□□ -1.6
PAN1	YIR006C	YPR097W	Q06839	1073 aa		5.09	□□□□□ -1.6
PAN1	YIR006C	DDP1	Q99321	188 aa	Known RBP	5.09	□□□□□ -1.6
PAN1	YIR006C	SSA4	P22202	642 aa	Known RBP	5.08	□□□□□ -1.6
PAN1	YIR006C	LOS1	P33418	1100 aa	Predicted RBP	5.08	□□□□□ -1.6
PAN1	YIR006C	RER2	P35196	286 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	SPP381	P38282	291 aa	Predicted RBP	5.08	□□□□□ -1.6
PAN1	YIR006C	EFM2	P38347	419 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	UTP9	P38882	575 aa	Known RBP	5.08	□□□□□ -1.6
PAN1	YIR006C	YFL034W	P43564	1073 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	MRS2	Q01926	470 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	VMR1	P38735	1592 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	MRPL25	P23369	157 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	SEC26	P41810	973 aa	Known RBP	5.08	□□□□□ -1.6
PAN1	YIR006C	YPT11	P48559	417 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	BRO1	P48582	844 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	DSE4	P53753	1117 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	SDH5	Q08230	162 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	DPH6	Q12429	685 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	RPT3	P33298	428 aa	Known RBP	5.08	□□□□□ -1.6
PAN1	YIR006C	CCL1	P37366	393 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	ORC6	P38826	435 aa		5.08	□□□□□ -1.6
PAN1	YIR006C	TIF4631	P39935	952 aa	Known RBP	5.08	□□□□□ -1.6
PAN1	YIR006C	RAT1	Q02792	1006 aa	Known RBP	5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms