RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W CDC45Q08032 650 aa5.69□□□□□ -1.5
NMD3YHR170W MRPL33P20084 86 aa5.68□□□□□ -1.5
NMD3YHR170W HSP104P31539 908 aaKnown RBP5.68□□□□□ -1.5
NMD3YHR170W MET22P32179 357 aa5.68□□□□□ -1.5
NMD3YHR170W RRN6P32786 894 aa5.68□□□□□ -1.5
NMD3YHR170W ATG1P53104 897 aa5.68□□□□□ -1.5
NMD3YHR170W SEN54Q02825 467 aaPredicted RBP5.68□□□□□ -1.5
NMD3YHR170W RSF2P46974 1380 aa5.68□□□□□ -1.5
NMD3YHR170W SCD5P34758 872 aa5.67□□□□□ -1.5
NMD3YHR170W HEF3P53978 1044 aaKnown RBP5.67□□□□□ -1.5
NMD3YHR170W PSH1Q12161 406 aa5.67□□□□□ -1.5
NMD3YHR170W CDC19P00549 500 aaKnown RBP5.67□□□□□ -1.5
NMD3YHR170W VMA3P25515 160 aa5.67□□□□□ -1.5
NMD3YHR170W PDC6P26263 563 aaKnown RBP5.67□□□□□ -1.5
NMD3YHR170W GLY1P37303 387 aaKnown RBP5.67□□□□□ -1.5
NMD3YHR170W GRS1P38088 690 aaKnown RBP5.67□□□□□ -1.5
NMD3YHR170W GLO3P38682 493 aaKnown RBP5.67□□□□□ -1.5
NMD3YHR170W QDR1P40475 563 aa5.67□□□□□ -1.5
NMD3YHR170W IMH1Q06704 911 aaKnown RBP5.67□□□□□ -1.5
NMD3YHR170W APC11Q12157 165 aa5.67□□□□□ -1.5
NMD3YHR170W AHP1P38013 176 aaKnown RBP5.66□□□□□ -1.5
NMD3YHR170W OSH7P38755 437 aa5.66□□□□□ -1.5
NMD3YHR170W ALD2P47771 506 aa5.66□□□□□ -1.5
NMD3YHR170W UBP2Q01476 1272 aa5.66□□□□□ -1.5
NMD3YHR170W UTP4Q06679 776 aaKnown RBP5.66□□□□□ -1.5
NMD3YHR170W TY1A-BLQ12266 440 aa5.66□□□□□ -1.5
NMD3YHR170W RIM15P43565 1770 aa5.66□□□□□ -1.5
NMD3YHR170W RPB10P22139 70 aa5.65□□□□□ -1.5
NMD3YHR170W PAM1P37304 830 aaKnown RBP5.65□□□□□ -1.5
NMD3YHR170W YBR287WP38355 427 aa5.65□□□□□ -1.5
NMD3YHR170W ACF4P47129 309 aa5.65□□□□□ -1.5
NMD3YHR170W NAM8Q00539 523 aaKnown RBP5.65□□□□□ -1.5
NMD3YHR170W YLR346CQ06139 101 aa5.65□□□□□ -1.5
NMD3YHR170W LCB5Q06147 687 aaKnown RBP5.65□□□□□ -1.5
NMD3YHR170W SIR4P11978 1358 aa5.64□□□□□ -1.51
NMD3YHR170W ADE16P54113 591 aaKnown RBP5.64□□□□□ -1.51
NMD3YHR170W YDR444WQ04093 687 aa5.64□□□□□ -1.51
NMD3YHR170W LEU1P07264 779 aaKnown RBP5.63□□□□□ -1.51
NMD3YHR170W NAB2P32505 525 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
NMD3YHR170W YKL133CP36066 463 aa5.63□□□□□ -1.51
NMD3YHR170W RRT14P40470 206 aa5.63□□□□□ -1.51
NMD3YHR170W YNL050CP53952 270 aa5.63□□□□□ -1.51
NMD3YHR170W INP54Q08227 384 aaKnown RBP5.63□□□□□ -1.51
NMD3YHR170W FRT1Q99332 602 aa5.63□□□□□ -1.51
NMD3YHR170W NUP145P49687 1317 aa5.63□□□□□ -1.51
NMD3YHR170W TOP1P04786 769 aa5.63□□□□□ -1.51
NMD3YHR170W DAL5P15365 543 aa5.63□□□□□ -1.51
NMD3YHR170W YHL050CP38721 697 aa5.63□□□□□ -1.51
NMD3YHR170W YHR219WP38900 624 aa5.63□□□□□ -1.51
NMD3YHR170W QDR2P40474 542 aa5.63□□□□□ -1.51
NMD3YHR170W UBP15P50101 1230 aa5.63□□□□□ -1.51
NMD3YHR170W SCW11P53189 542 aa5.63□□□□□ -1.51
NMD3YHR170W NUT2Q06213 157 aa5.63□□□□□ -1.51
NMD3YHR170W AOS1Q06624 347 aa5.63□□□□□ -1.51
NMD3YHR170W HEM3P28789 327 aa5.62□□□□□ -1.51
NMD3YHR170W KAP122P32767 1081 aa5.62□□□□□ -1.51
NMD3YHR170W BRN1P38170 754 aa5.62□□□□□ -1.51
NMD3YHR170W DOT5P40553 215 aa5.62□□□□□ -1.51
NMD3YHR170W SUT1P53032 299 aaKnown RBP5.62□□□□□ -1.51
NMD3YHR170W RPC31P17890 251 aa5.61□□□□□ -1.51
NMD3YHR170W STM1P39015 273 aaKnown RBP5.61□□□□□ -1.51
NMD3YHR170W NOP2P40991 618 aaKnown RBP5.61□□□□□ -1.51
NMD3YHR170W ZDS1P50111 915 aaKnown RBP5.61□□□□□ -1.51
NMD3YHR170W MTO1P53070 669 aa5.61□□□□□ -1.51
NMD3YHR170W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
NMD3YHR170W MSC6Q08818 692 aaKnown RBP5.61□□□□□ -1.51
NMD3YHR170W MNL2Q12205 849 aa5.61□□□□□ -1.51
NMD3YHR170W COQ4O13525 335 aa5.6□□□□□ -1.51
NMD3YHR170W COBP00163 385 aa5.6□□□□□ -1.51
NMD3YHR170W OSM1P21375 501 aaKnown RBP5.6□□□□□ -1.51
NMD3YHR170W RGA1P39083 1007 aa5.6□□□□□ -1.51
NMD3YHR170W YTA6P40328 754 aa5.6□□□□□ -1.51
NMD3YHR170W YIL092WP40497 633 aa5.6□□□□□ -1.51
NMD3YHR170W GYP7P48365 746 aa5.6□□□□□ -1.51
NMD3YHR170W GPI13Q07830 1017 aa5.6□□□□□ -1.51
NMD3YHR170W ALE1Q08548 619 aa5.6□□□□□ -1.51
NMD3YHR170W BMS1Q08965 1183 aaKnown RBP5.6□□□□□ -1.51
NMD3YHR170W KCC4P25389 1037 aa5.59□□□□□ -1.51
NMD3YHR170W LDH1P38139 375 aa5.59□□□□□ -1.51
NMD3YHR170W CTF4Q01454 927 aa5.59□□□□□ -1.51
NMD3YHR170W SRT1Q03175 343 aa5.59□□□□□ -1.51
NMD3YHR170W ROM2P51862 1356 aaKnown RBP5.59□□□□□ -1.51
NMD3YHR170W CCP1P00431 361 aa5.59□□□□□ -1.52
NMD3YHR170W RGP1P16664 663 aa5.59□□□□□ -1.52
NMD3YHR170W MSN1P22148 382 aa5.59□□□□□ -1.52
NMD3YHR170W ACO2P39533 789 aa5.59□□□□□ -1.52
NMD3YHR170W MAM1P40065 302 aa5.59□□□□□ -1.52
NMD3YHR170W HXT8P40886 569 aa5.59□□□□□ -1.52
NMD3YHR170W YRB30P53107 440 aaPredicted RBP5.59□□□□□ -1.52
NMD3YHR170W MEC3Q02574 474 aa5.59□□□□□ -1.52
NMD3YHR170W ATG13Q06628 738 aa5.59□□□□□ -1.52
NMD3YHR170W WHI5Q12416 295 aa5.59□□□□□ -1.52
NMD3YHR170W MRPL16P38064 232 aa5.58□□□□□ -1.52
NMD3YHR170W BSD2P38356 321 aa5.58□□□□□ -1.52
NMD3YHR170W DYS1P38791 387 aa5.58□□□□□ -1.52
NMD3YHR170W ROG3P43602 733 aa5.58□□□□□ -1.52
NMD3YHR170W YGR122WP53272 402 aa5.58□□□□□ -1.52
NMD3YHR170W ZDS2P54786 942 aa5.58□□□□□ -1.52
NMD3YHR170W TRS120Q04183 1289 aa5.58□□□□□ -1.52
NMD3YHR170W TY1A-MR1Q04215 440 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms