RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W TY1A-LR2P0CX72 440 aa2.09□□□□□ -2.08
SMC1YFL008W TY1A-PLP0CX73 440 aa2.09□□□□□ -2.08
SMC1YFL008W TY1A-JR1P0CX74 440 aa2.09□□□□□ -2.08
SMC1YFL008W TY1A-LR3P0CX75 440 aa2.09□□□□□ -2.08
SMC1YFL008W TY1A-ML2P0CX76 440 aa2.09□□□□□ -2.08
SMC1YFL008W TY1A-GR1Q12085 440 aa2.09□□□□□ -2.08
SMC1YFL008W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.09□□□□□ -2.08
SMC1YFL008W TY1A-OLQ92392 440 aaKnown RBP2.09□□□□□ -2.08
SMC1YFL008W TRS33Q99394 268 aa2.09□□□□□ -2.08
SMC1YFL008W TY4B-PA0A0B7P3V8 1104 aa2.08□□□□□ -2.08
SMC1YFL008W MCX1P38323 520 aaPredicted RBP2.08□□□□□ -2.08
SMC1YFL008W BUD9P53226 547 aa2.08□□□□□ -2.08
SMC1YFL008W TY4A-HQ6Q5P6 413 aa2.08□□□□□ -2.08
SMC1YFL008W CEM1P39525 442 aa2.08□□□□□ -2.08
SMC1YFL008W DLD3P39976 496 aaKnown RBP2.08□□□□□ -2.08
SMC1YFL008W NPR1P22211 790 aa2.07□□□□□ -2.08
SMC1YFL008W YHL050CP38721 697 aa2.07□□□□□ -2.08
SMC1YFL008W YHR219WP38900 624 aa2.07□□□□□ -2.08
SMC1YFL008W MTO1P53070 669 aa2.07□□□□□ -2.08
SMC1YFL008W TY1A-NL1Q12391 440 aaKnown RBP2.07□□□□□ -2.08
SMC1YFL008W PDR5P33302 1511 aaKnown RBP2.07□□□□□ -2.08
SMC1YFL008W IRS4P36115 615 aaKnown RBP2.07□□□□□ -2.08
SMC1YFL008W ISW1P38144 1129 aa2.07□□□□□ -2.08
SMC1YFL008W EXO5P38289 585 aa2.07□□□□□ -2.08
SMC1YFL008W DYS1P38791 387 aa2.07□□□□□ -2.08
SMC1YFL008W FAA3P39002 694 aa2.07□□□□□ -2.08
SMC1YFL008W YJR124CP47159 448 aa2.07□□□□□ -2.08
SMC1YFL008W YNR014WP53719 212 aa2.07□□□□□ -2.08
SMC1YFL008W YNL011CP53980 444 aa2.07□□□□□ -2.08
SMC1YFL008W FOX2Q02207 900 aaKnown RBP2.07□□□□□ -2.08
SMC1YFL008W HEH2Q03281 663 aa2.07□□□□□ -2.08
SMC1YFL008W CDC3P32457 520 aaKnown RBP2.07□□□□□ -2.08
SMC1YFL008W YMR187CQ03236 431 aa2.07□□□□□ -2.08
SMC1YFL008W YML020WQ03722 664 aa2.07□□□□□ -2.08
SMC1YFL008W TDA6Q06466 467 aa2.07□□□□□ -2.08
SMC1YFL008W HAT1Q12341 374 aa2.07□□□□□ -2.08
SMC1YFL008W FUS1P11710 512 aa2.06□□□□□ -2.08
SMC1YFL008W TBS1P38114 1094 aa2.06□□□□□ -2.08
SMC1YFL008W HGH1P48362 394 aaKnown RBP2.06□□□□□ -2.08
SMC1YFL008W NUT1P53114 1132 aa2.06□□□□□ -2.08
SMC1YFL008W AI3P03877 415 aa2.06□□□□□ -2.08
SMC1YFL008W PGM2P37012 569 aaKnown RBP2.06□□□□□ -2.08
SMC1YFL008W AHP1P38013 176 aaKnown RBP2.06□□□□□ -2.08
SMC1YFL008W HAS1Q03532 505 aaKnown RBP2.06□□□□□ -2.08
SMC1YFL008W GAS5Q08193 484 aa2.06□□□□□ -2.08
SMC1YFL008W MCA1Q08601 432 aa2.06□□□□□ -2.08
SMC1YFL008W ERS1P17261 260 aa2.05□□□□□ -2.08
SMC1YFL008W AFG2P32794 780 aa2.05□□□□□ -2.08
SMC1YFL008W MAC1P35192 417 aa2.05□□□□□ -2.08
SMC1YFL008W YMR265CQ03508 461 aaKnown RBP2.05□□□□□ -2.08
SMC1YFL008W YIG1Q08956 461 aa2.05□□□□□ -2.08
SMC1YFL008W REC8Q12188 680 aa2.05□□□□□ -2.08
SMC1YFL008W SNQ2P32568 1501 aaKnown RBP2.05□□□□□ -2.08
SMC1YFL008W HTS1P07263 546 aaKnown RBP2.05□□□□□ -2.08
SMC1YFL008W YOR1P53049 1477 aa2.05□□□□□ -2.08
SMC1YFL008W SPO71Q03868 1245 aa2.05□□□□□ -2.08
SMC1YFL008W KAR5Q04746 504 aa2.05□□□□□ -2.08
SMC1YFL008W GDB1Q06625 1536 aa2.04□□□□□ -2.08
SMC1YFL008W YOR093CQ12275 1648 aa2.04□□□□□ -2.08
SMC1YFL008W FPS1P23900 669 aa2.04□□□□□ -2.08
SMC1YFL008W GLO3P38682 493 aaKnown RBP2.04□□□□□ -2.08
SMC1YFL008W FYV10P40492 516 aa2.04□□□□□ -2.08
SMC1YFL008W CTH1P47976 325 aa2.04□□□□□ -2.08
SMC1YFL008W YPL109CQ02981 657 aa2.04□□□□□ -2.08
SMC1YFL008W RAD55P38953 406 aa2.04□□□□□ -2.08
SMC1YFL008W SUT1P53032 299 aaKnown RBP2.04□□□□□ -2.08
SMC1YFL008W PPT1P53043 513 aa2.04□□□□□ -2.08
SMC1YFL008W SNT2P53127 1403 aa2.04□□□□□ -2.08
SMC1YFL008W ALA1P40825 983 aaKnown RBP2.04□□□□□ -2.08
SMC1YFL008W LSB6P42951 607 aa2.04□□□□□ -2.08
SMC1YFL008W SLP1Q12232 587 aa2.04□□□□□ -2.08
SMC1YFL008W FUR4P05316 633 aaKnown RBP2.03□□□□□ -2.08
SMC1YFL008W TSA1P34760 196 aaKnown RBP2.03□□□□□ -2.08
SMC1YFL008W INP52P50942 1183 aa2.03□□□□□ -2.08
SMC1YFL008W YAF9P53930 226 aa2.03□□□□□ -2.08
SMC1YFL008W UFD2P54860 961 aa2.03□□□□□ -2.08
SMC1YFL008W VPS15P22219 1454 aa2.03□□□□□ -2.08
SMC1YFL008W CYC8P14922 966 aa2.03□□□□□ -2.08
SMC1YFL008W PAN5P38787 379 aa2.03□□□□□ -2.08
SMC1YFL008W EAR1Q03212 550 aa2.03□□□□□ -2.08
SMC1YFL008W BSC2Q05611 235 aa2.03□□□□□ -2.08
SMC1YFL008W MAG2Q06436 670 aaKnown RBP2.03□□□□□ -2.08
SMC1YFL008W DNF3Q12674 1656 aa2.03□□□□□ -2.08
SMC1YFL008W RPP2BP02400 110 aaKnown RBP2.03□□□□□ -2.09
SMC1YFL008W SEC23P15303 768 aaKnown RBP2.03□□□□□ -2.09
SMC1YFL008W ABZ1P37254 787 aaPredicted RBP2.03□□□□□ -2.09
SMC1YFL008W PAM1P37304 830 aaKnown RBP2.03□□□□□ -2.09
SMC1YFL008W NEM1P38757 446 aa2.03□□□□□ -2.09
SMC1YFL008W GIP2P40036 548 aa2.02□□□□□ -2.09
SMC1YFL008W PRY1P47032 299 aa2.02□□□□□ -2.09
SMC1YFL008W INP54Q08227 384 aaKnown RBP2.02□□□□□ -2.09
SMC1YFL008W NCL1P38205 684 aaKnown RBP2.02□□□□□ -2.09
SMC1YFL008W AIM46P38885 310 aa2.02□□□□□ -2.09
SMC1YFL008W YGL140CP53120 1219 aa2.02□□□□□ -2.09
SMC1YFL008W GUP1P53154 560 aa2.02□□□□□ -2.09
SMC1YFL008W RCL1Q08096 367 aaPredicted RBP2.02□□□□□ -2.09
SMC1YFL008W YPL066WQ12194 479 aa2.02□□□□□ -2.09
SMC1YFL008W MET5P47169 1442 aa2.02□□□□□ -2.09
SMC1YFL008W GRS1P38088 690 aaKnown RBP2.02□□□□□ -2.09
SMC1YFL008W ULP1Q02724 621 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms