RNA–Protein interactions for RNA: YBR178W

YBR178W, Transcript of Dubious open reading frame, yeastyeast

Gene YBR178W, Length 375 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR178WYBR178W ALG6Q12001 544 aaKnown RBP3.22□□□□□ -1.89
YBR178WYBR178W ROM1P53046 1155 aa3.21□□□□□ -1.9
YBR178WYBR178W URN1Q06525 465 aaKnown RBP3.21□□□□□ -1.9
YBR178WYBR178W VAN1P23642 535 aa3.2□□□□□ -1.9
YBR178WYBR178W SUV3P32580 737 aa3.2□□□□□ -1.9
YBR178WYBR178W FIR1P40020 876 aa3.2□□□□□ -1.9
YBR178WYBR178W GCN5Q03330 439 aa3.2□□□□□ -1.9
YBR178WYBR178W PEP12P32854 288 aa3.19□□□□□ -1.9
YBR178WYBR178W CUE2P36075 443 aaKnown RBP3.19□□□□□ -1.9
YBR178WYBR178W MEF2P39677 819 aa3.19□□□□□ -1.9
YBR178WYBR178W PHO23P50947 330 aa3.18□□□□□ -1.9
YBR178WYBR178W UBA2P52488 636 aa3.18□□□□□ -1.9
YBR178WYBR178W MCM6P53091 1017 aaKnown RBP3.18□□□□□ -1.9
YBR178WYBR178W SMY2P32909 740 aaKnown RBP3.17□□□□□ -1.9
YBR178WYBR178W YBR197CP38306 217 aa3.17□□□□□ -1.9
YBR178WYBR178W LAM1P38851 1228 aa3.17□□□□□ -1.9
YBR178WYBR178W KIN4Q01919 800 aa3.17□□□□□ -1.9
YBR178WYBR178W SGD1Q06132 899 aa3.16□□□□□ -1.9
YBR178WYBR178W YAP7Q08182 245 aa3.16□□□□□ -1.9
YBR178WYBR178W MNN10P50108 393 aaKnown RBP3.15□□□□□ -1.91
YBR178WYBR178W ELA1P53861 379 aaPredicted RBP3.15□□□□□ -1.91
YBR178WYBR178W OAR1P35731 278 aa3.14□□□□□ -1.91
YBR178WYBR178W MOH1P38191 138 aa3.14□□□□□ -1.91
YBR178WYBR178W TMA10Q06177 86 aa3.14□□□□□ -1.91
YBR178WYBR178W TRS33Q99394 268 aa3.14□□□□□ -1.91
YBR178WYBR178W AIM26P32858 118 aa3.13□□□□□ -1.91
YBR178WYBR178W PUS7Q08647 676 aaKnown RBP3.13□□□□□ -1.91
YBR178WYBR178W YIG1Q08956 461 aa3.13□□□□□ -1.91
YBR178WYBR178W AFT2Q08957 416 aa3.13□□□□□ -1.91
YBR178WYBR178W PUF4P25339 888 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
YBR178WYBR178W REI1P38344 393 aaPredicted RBP3.12□□□□□ -1.91
YBR178WYBR178W RGD2P43556 714 aa3.12□□□□□ -1.91
YBR178WYBR178W MEC3Q02574 474 aa3.12□□□□□ -1.91
YBR178WYBR178W ISC10P32645 267 aa3.11□□□□□ -1.91
YBR178WYBR178W LST4P34239 828 aa3.11□□□□□ -1.91
YBR178WYBR178W NNK1P36003 928 aa3.11□□□□□ -1.91
YBR178WYBR178W TPP1Q03796 238 aa3.11□□□□□ -1.91
YBR178WYBR178W PYC2P32327 1180 aaKnown RBP3.1□□□□□ -1.91
YBR178WYBR178W HXT8P40886 569 aa3.1□□□□□ -1.91
YBR178WYBR178W STE11P23561 717 aa3.09□□□□□ -1.91
YBR178WYBR178W YHL012WP38709 493 aa3.09□□□□□ -1.91
YBR178WYBR178W MSS4P38994 779 aa3.09□□□□□ -1.91
YBR178WYBR178W YGR045CP53229 120 aa3.09□□□□□ -1.91
YBR178WYBR178W ROT1Q03691 256 aa3.09□□□□□ -1.91
YBR178WYBR178W SAM35P14693 329 aa3.08□□□□□ -1.92
YBR178WYBR178W DOM34P33309 386 aa3.08□□□□□ -1.92
YBR178WYBR178W ICT1Q12385 394 aa3.08□□□□□ -1.92
YBR178WYBR178W HTS1P07263 546 aaKnown RBP3.06□□□□□ -1.92
YBR178WYBR178W YJL007CP47080 104 aa3.06□□□□□ -1.92
YBR178WYBR178W MDL2P33311 773 aa3.05□□□□□ -1.92
YBR178WYBR178W DEF1P35732 738 aaKnown RBP3.05□□□□□ -1.92
YBR178WYBR178W DUS4Q06063 367 aa3.05□□□□□ -1.92
YBR178WYBR178W AVO1Q08236 1176 aa3.05□□□□□ -1.92
YBR178WYBR178W GAL2P13181 574 aa3.04□□□□□ -1.92
YBR178WYBR178W RTG2P32608 588 aaKnown RBP3.04□□□□□ -1.92
YBR178WYBR178W NMD3P38861 518 aaKnown RBP3.04□□□□□ -1.92
YBR178WYBR178W YER158CP40095 573 aa3.04□□□□□ -1.92
YBR178WYBR178W CYC1P00044 109 aaPredicted RBP3.03□□□□□ -1.92
YBR178WYBR178W PMA1P05030 918 aaKnown RBP3.03□□□□□ -1.92
YBR178WYBR178W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
YBR178WYBR178W TIF6Q12522 245 aaKnown RBP3.03□□□□□ -1.92
YBR178WYBR178W CDC20P26309 610 aa3.02□□□□□ -1.93
YBR178WYBR178W NTA1P40354 457 aa3.02□□□□□ -1.93
YBR178WYBR178W UTP22P53254 1237 aaPredicted RBP3.02□□□□□ -1.93
YBR178WYBR178W SPS1P08458 490 aa3.01□□□□□ -1.93
YBR178WYBR178W SRS2P12954 1174 aa3.01□□□□□ -1.93
YBR178WYBR178W QRI1P43123 477 aaKnown RBP3.01□□□□□ -1.93
YBR178WYBR178W STU2P46675 888 aa3.01□□□□□ -1.93
YBR178WYBR178W ENV11P53246 860 aa3.01□□□□□ -1.93
YBR178WYBR178W PLB2Q03674 706 aa3.01□□□□□ -1.93
YBR178WYBR178W ACK1Q07622 623 aaPredicted RBP3□□□□□ -1.93
YBR178WYBR178W MDM10P18409 493 aa2.99□□□□□ -1.93
YBR178WYBR178W RAD55P38953 406 aa2.99□□□□□ -1.93
YBR178WYBR178W TMT1P32643 299 aa2.98□□□□□ -1.93
YBR178WYBR178W PEX2P32800 271 aa2.98□□□□□ -1.93
YBR178WYBR178W PSY2P40164 858 aa2.98□□□□□ -1.93
YBR178WYBR178W ALD4P46367 519 aaKnown RBP2.98□□□□□ -1.93
YBR178WYBR178W RXT3Q07458 294 aa2.98□□□□□ -1.93
YBR178WYBR178W NDJ1Q12366 352 aa2.98□□□□□ -1.93
YBR178WYBR178W IRS4P36115 615 aaKnown RBP2.97□□□□□ -1.93
YBR178WYBR178W HNT2P49775 206 aa2.97□□□□□ -1.93
YBR178WYBR178W SUT1P53032 299 aaKnown RBP2.97□□□□□ -1.93
YBR178WYBR178W TIF1P10081 395 aaKnown RBP2.96□□□□□ -1.94
YBR178WYBR178W NPR1P22211 790 aa2.96□□□□□ -1.94
YBR178WYBR178W SCS3P53012 380 aa2.96□□□□□ -1.94
YBR178WYBR178W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
YBR178WYBR178W HOF1Q05080 669 aa2.96□□□□□ -1.94
YBR178WYBR178W DCG1P32460 244 aa2.95□□□□□ -1.94
YBR178WYBR178W SRO9P25567 434 aaKnown RBP2.94□□□□□ -1.94
YBR178WYBR178W KTR2P33550 425 aa2.93□□□□□ -1.94
YBR178WYBR178W YLR257WQ06146 321 aaKnown RBP2.93□□□□□ -1.94
YBR178WYBR178W RSC58Q07979 502 aa2.93□□□□□ -1.94
YBR178WYBR178W GPB1Q08886 897 aa2.93□□□□□ -1.94
YBR178WYBR178W CMR1Q12510 522 aaKnown RBP2.93□□□□□ -1.94
YBR178WYBR178W DMA1P38823 416 aa2.92□□□□□ -1.94
YBR178WYBR178W TMN2Q04562 672 aa2.92□□□□□ -1.94
YBR178WYBR178W RET1P22276 1149 aaKnown RBP2.91□□□□□ -1.94
YBR178WYBR178W SEC5P89102 971 aa2.91□□□□□ -1.94
YBR178WYBR178W RIM11P38615 370 aa2.9□□□□□ -1.95
YBR178WYBR178W ATG32P40458 529 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms