RNA–Protein interactions for RNA: ENST00000640773.1

KCNMA1-288, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-288ENST00000640773 CLCN1P35523 988 aa11.49□□□□□ -0.57
KCNMA1-288ENST00000640773 PARP4Q9UKK3 1724 aaKnown RBP11.49□□□□□ -0.57
KCNMA1-288ENST00000640773 BCL9LQ86UU0 1499 aa11.48□□□□□ -0.57
KCNMA1-288ENST00000640773 HSPA5P11021 654 aaKnown RBP11.48□□□□□ -0.57
KCNMA1-288ENST00000640773 MS4A1P11836 297 aa11.48□□□□□ -0.57
KCNMA1-288ENST00000640773 DDX17Q92841 729 aaKnown RBP11.48□□□□□ -0.57
KCNMA1-288ENST00000640773 CABP2Q9NPB3 220 aa11.48□□□□□ -0.57
KCNMA1-288ENST00000640773 GLI3P10071 1580 aa11.48□□□□□ -0.57
KCNMA1-288ENST00000640773 LRRC59Q96AG4 307 aaKnown RBP11.48□□□□□ -0.57
KCNMA1-288ENST00000640773 PDCL3Q9H2J4 239 aa11.48□□□□□ -0.57
KCNMA1-288ENST00000640773 SMG6Q86US8 1419 aaKnown RBP11.48□□□□□ -0.57
KCNMA1-288ENST00000640773 RGPD2P0DJD1 1756 aa11.48□□□□□ -0.57
KCNMA1-288ENST00000640773 BRWD3Q6RI45 1802 aa11.47□□□□□ -0.57
KCNMA1-288ENST00000640773 PDE4AP27815 886 aa11.47□□□□□ -0.57
KCNMA1-288ENST00000640773 ESCO1Q5FWF5 840 aa11.47□□□□□ -0.57
KCNMA1-288ENST00000640773 TAF7LQ5H9L4 462 aa11.47□□□□□ -0.57
KCNMA1-288ENST00000640773 BACH2Q9BYV9 841 aa11.47□□□□□ -0.57
KCNMA1-288ENST00000640773 RGS17Q9UGC6 210 aaPredicted RBP11.47□□□□□ -0.57
KCNMA1-288ENST00000640773 SAFB2Q14151 953 aaKnown RBP eCLIP11.46□□□□□ -0.57
KCNMA1-288ENST00000640773 CDK12Q9NYV4 1490 aaPredicted RBP11.46□□□□□ -0.57
KCNMA1-288ENST00000640773 PIP4K2BP78356 416 aa11.46□□□□□ -0.58
KCNMA1-288ENST00000640773 ZNF692Q9BU19 519 aaPredicted RBP11.46□□□□□ -0.58
KCNMA1-288ENST00000640773 NCAPD2Q15021 1401 aa11.46□□□□□ -0.58
KCNMA1-288ENST00000640773 L1TD1Q5T7N2 865 aaKnown RBP11.45□□□□□ -0.58
KCNMA1-288ENST00000640773 CABP1Q9NZU7 370 aa11.45□□□□□ -0.58
KCNMA1-288ENST00000640773 TTC21AQ8NDW8 1320 aa11.45□□□□□ -0.58
KCNMA1-288ENST00000640773 CNGB1Q14028 1251 aaPredicted RBP11.45□□□□□ -0.58
KCNMA1-288ENST00000640773 KRT28Q7Z3Y7 464 aa11.45□□□□□ -0.58
KCNMA1-288ENST00000640773 ATRNO75882 1429 aa11.45□□□□□ -0.58
KCNMA1-288ENST00000640773 EIF4G2P78344 907 aaKnown RBP eCLIP11.45□□□□□ -0.58
KCNMA1-288ENST00000640773 NPC1L1Q9UHC9 1359 aa11.45□□□□□ -0.58
KCNMA1-288ENST00000640773 PER1O15534 1290 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-288ENST00000640773 CARD14Q9BXL6 1004 aa11.44□□□□□ -0.58
KCNMA1-288ENST00000640773 FOXO3O43524 673 aa11.44□□□□□ -0.58
KCNMA1-288ENST00000640773 FNBP4Q8N3X1 1017 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-288ENST00000640773 TMF1P82094 1093 aa11.43□□□□□ -0.58
KCNMA1-288ENST00000640773 KIF7Q2M1P5 1343 aa11.43□□□□□ -0.58
KCNMA1-288ENST00000640773 CCDC7Q96M83 1385 aa11.43□□□□□ -0.58
KCNMA1-288ENST00000640773 TTC21BQ7Z4L5 1316 aa11.43□□□□□ -0.58
KCNMA1-288ENST00000640773 C14orf37Q86TY3 774 aa11.42□□□□□ -0.58
KCNMA1-288ENST00000640773 PKD1L3Q7Z443 1732 aa11.42□□□□□ -0.58
KCNMA1-288ENST00000640773 SBF2Q86WG5 1849 aa11.42□□□□□ -0.58
KCNMA1-288ENST00000640773 PSME1Q06323 249 aa11.42□□□□□ -0.58
KCNMA1-288ENST00000640773 TPM2P07951 284 aa11.41□□□□□ -0.58
KCNMA1-288ENST00000640773 SLC12A5Q9H2X9 1139 aa11.41□□□□□ -0.58
KCNMA1-288ENST00000640773 LRRC37A3O60309 1634 aa11.41□□□□□ -0.58
KCNMA1-288ENST00000640773 KTN1Q86UP2 1357 aaKnown RBP11.41□□□□□ -0.58
KCNMA1-288ENST00000640773 PMFBP1Q8TBY8 1022 aa11.41□□□□□ -0.58
KCNMA1-288ENST00000640773 VIRMAQ69YN4 1812 aaKnown RBP11.4□□□□□ -0.58
KCNMA1-288ENST00000640773 RGS3P49796 1198 aa11.4□□□□□ -0.59
KCNMA1-288ENST00000640773 AATKQ6ZMQ8 1374 aa11.39□□□□□ -0.59
KCNMA1-288ENST00000640773 ADAMTS7Q9UKP4 1686 aa11.39□□□□□ -0.59
KCNMA1-288ENST00000640773 COL5A2P05997 1499 aaPredicted RBP11.39□□□□□ -0.59
KCNMA1-288ENST00000640773 CDCA8Q53HL2 280 aa11.39□□□□□ -0.59
KCNMA1-288ENST00000640773 RGPD3A6NKT7 1758 aaPredicted RBP11.39□□□□□ -0.59
KCNMA1-288ENST00000640773 RGPD4Q7Z3J3 1758 aa11.39□□□□□ -0.59
KCNMA1-288ENST00000640773 SRPK2P78362 688 aaKnown RBP11.39□□□□□ -0.59
KCNMA1-288ENST00000640773 KIF24Q5T7B8 1368 aa11.38□□□□□ -0.59
KCNMA1-288ENST00000640773 EP400Q96L91 3159 aa11.38□□□□□ -0.59
KCNMA1-288ENST00000640773 NSD2O96028 1365 aa11.38□□□□□ -0.59
KCNMA1-288ENST00000640773 FRAT2O75474 233 aaPredicted RBP11.38□□□□□ -0.59
KCNMA1-288ENST00000640773 COL3A1P02461 1466 aaPredicted RBP11.38□□□□□ -0.59
KCNMA1-288ENST00000640773 NUTM2FA1L443 756 aa11.37□□□□□ -0.59
KCNMA1-288ENST00000640773 INSRP06213 1382 aa11.37□□□□□ -0.59
KCNMA1-288ENST00000640773 ONECUT3O60422 494 aaPredicted RBP11.37□□□□□ -0.59
KCNMA1-288ENST00000640773 TNS1Q9HBL0 1735 aaKnown RBP11.37□□□□□ -0.59
KCNMA1-288ENST00000640773 NUDCQ9Y266 331 aa11.36□□□□□ -0.59
KCNMA1-288ENST00000640773 FYB1O15117 783 aa11.36□□□□□ -0.59
KCNMA1-288ENST00000640773 DISP2A7MBM2 1401 aa11.36□□□□□ -0.59
KCNMA1-288ENST00000640773 AMER1Q5JTC6 1135 aaPredicted RBP11.35□□□□□ -0.59
KCNMA1-288ENST00000640773 NSD3Q9BZ95 1437 aa11.35□□□□□ -0.59
KCNMA1-288ENST00000640773 PLEKHG2Q9H7P9 1386 aa11.35□□□□□ -0.59
KCNMA1-288ENST00000640773 RTL1A6NKG5 1358 aa11.35□□□□□ -0.59
KCNMA1-288ENST00000640773 BLMP54132 1417 aaPredicted RBP11.35□□□□□ -0.59
KCNMA1-288ENST00000640773 BBXQ8WY36 941 aaPredicted RBP11.34□□□□□ -0.59
KCNMA1-288ENST00000640773 NAP1L2Q9ULW6 460 aaPredicted RBP11.34□□□□□ -0.59
KCNMA1-288ENST00000640773 FAM83GA6ND36 823 aa11.34□□□□□ -0.59
KCNMA1-288ENST00000640773 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
KCNMA1-288ENST00000640773 ARHGEF25Q86VW2 580 aa11.34□□□□□ -0.59
KCNMA1-288ENST00000640773 TERF2IPQ9NYB0 399 aa11.33□□□□□ -0.6
KCNMA1-288ENST00000640773 NCLP19338 710 aaKnown RBP11.33□□□□□ -0.6
KCNMA1-288ENST00000640773 NGDNQ8NEJ9 315 aaKnown RBP11.33□□□□□ -0.6
KCNMA1-288ENST00000640773 SMAP1Q8IYB5 467 aaPredicted RBP11.32□□□□□ -0.6
KCNMA1-288ENST00000640773 MAP7D2Q96T17 732 aa11.32□□□□□ -0.6
KCNMA1-288ENST00000640773 BCL9O00512 1426 aa11.32□□□□□ -0.6
KCNMA1-288ENST00000640773 GCP02774 474 aa11.32□□□□□ -0.6
KCNMA1-288ENST00000640773 KIAA0232Q92628 1395 aa11.31□□□□□ -0.6
KCNMA1-288ENST00000640773 GTF2E1P29083 439 aaPredicted RBP11.31□□□□□ -0.6
KCNMA1-288ENST00000640773 FAM9BQ8IZU0 186 aa11.31□□□□□ -0.6
KCNMA1-288ENST00000640773 CICQ96RK0 1608 aaPredicted RBP11.31□□□□□ -0.6
KCNMA1-288ENST00000640773 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
KCNMA1-288ENST00000640773 ZRANB1Q9UGI0 708 aa11.3□□□□□ -0.6
KCNMA1-288ENST00000640773 CCDC184Q52MB2 194 aa11.3□□□□□ -0.6
KCNMA1-288ENST00000640773 NME9Q86XW9 330 aa11.3□□□□□ -0.6
KCNMA1-288ENST00000640773 IPO4Q8TEX9 1081 aaKnown RBP11.3□□□□□ -0.6
KCNMA1-288ENST00000640773 TOGARAM1Q9Y4F4 1720 aa11.3□□□□□ -0.6
KCNMA1-288ENST00000640773 ZNF831Q5JPB2 1677 aa11.3□□□□□ -0.6
KCNMA1-288ENST00000640773 RGS12O14924 1447 aa11.3□□□□□ -0.6
KCNMA1-288ENST00000640773 RREB1Q92766 1687 aa11.3□□□□□ -0.6
KCNMA1-288ENST00000640773 CANXP27824 592 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms