RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 USP54Q70EL1 1684 aa11.71□□□□□ -0.54
HLA-B-258ENST00000640615 INSRP06213 1382 aa11.7□□□□□ -0.54
HLA-B-258ENST00000640615 MARF1Q9Y4F3 1742 aaKnown RBP11.7□□□□□ -0.54
HLA-B-258ENST00000640615 U2SURPO15042 1029 aaKnown RBP11.7□□□□□ -0.54
HLA-B-258ENST00000640615 HOXC9P31274 260 aa11.7□□□□□ -0.54
HLA-B-258ENST00000640615 IP6K1Q92551 441 aa11.7□□□□□ -0.54
HLA-B-258ENST00000640615 ADAMTS8Q9UP79 889 aa11.7□□□□□ -0.54
HLA-B-258ENST00000640615 NFAT5O94916 1531 aa11.7□□□□□ -0.54
HLA-B-258ENST00000640615 FLT4P35916 1363 aa11.69□□□□□ -0.54
HLA-B-258ENST00000640615 KIF24Q5T7B8 1368 aa11.69□□□□□ -0.54
HLA-B-258ENST00000640615 U2AF1L5P0DN76 240 aaPredicted RBP11.69□□□□□ -0.54
HLA-B-258ENST00000640615 U2AF1Q01081 240 aaKnown RBP eCLIP11.69□□□□□ -0.54
HLA-B-258ENST00000640615 LTV1Q96GA3 475 aaPredicted RBP11.69□□□□□ -0.54
HLA-B-258ENST00000640615 RGS12O14924 1447 aa11.69□□□□□ -0.54
HLA-B-258ENST00000640615 IL13P35225 146 aa11.68□□□□□ -0.54
HLA-B-258ENST00000640615 EIF4A2Q14240 407 aaKnown RBP11.68□□□□□ -0.54
HLA-B-258ENST00000640615 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
HLA-B-258ENST00000640615 KIAA0232Q92628 1395 aa11.67□□□□□ -0.54
HLA-B-258ENST00000640615 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
HLA-B-258ENST00000640615 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
HLA-B-258ENST00000640615 RBM6P78332 1123 aaKnown RBP11.67□□□□□ -0.54
HLA-B-258ENST00000640615 CHRNA2Q15822 529 aa11.67□□□□□ -0.54
HLA-B-258ENST00000640615 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
HLA-B-258ENST00000640615 PRDM11Q9NQV5 511 aa11.67□□□□□ -0.54
HLA-B-258ENST00000640615 COL3A1P02461 1466 aaPredicted RBP11.67□□□□□ -0.54
HLA-B-258ENST00000640615 MAP2P11137 1827 aaKnown RBP11.67□□□□□ -0.54
HLA-B-258ENST00000640615 QTRT2Q9H974 415 aaKnown RBP11.66□□□□□ -0.54
HLA-B-258ENST00000640615 PEAK1Q9H792 1746 aa11.66□□□□□ -0.54
HLA-B-258ENST00000640615 CPDO75976 1380 aa11.66□□□□□ -0.54
HLA-B-258ENST00000640615 ADAMTS2O95450 1211 aa11.65□□□□□ -0.54
HLA-B-258ENST00000640615 CCDC146Q8IYE0 955 aa11.65□□□□□ -0.54
HLA-B-258ENST00000640615 FNBP4Q8N3X1 1017 aaPredicted RBP11.65□□□□□ -0.54
HLA-B-258ENST00000640615 AXIN2Q9Y2T1 843 aa11.65□□□□□ -0.54
HLA-B-258ENST00000640615 PHRF1Q9P1Y6 1649 aaKnown RBP11.64□□□□□ -0.55
HLA-B-258ENST00000640615 HMOX1P09601 288 aa11.64□□□□□ -0.55
HLA-B-258ENST00000640615 HNRNPUQ00839 825 aaKnown RBP eCLIP11.64□□□□□ -0.55
HLA-B-258ENST00000640615 ANKRD24Q8TF21 1146 aa11.64□□□□□ -0.55
HLA-B-258ENST00000640615 C8orf37Q96NL8 207 aa11.64□□□□□ -0.55
HLA-B-258ENST00000640615 ATRNO75882 1429 aa11.63□□□□□ -0.55
HLA-B-258ENST00000640615 BLMP54132 1417 aaPredicted RBP11.63□□□□□ -0.55
HLA-B-258ENST00000640615 SENP3-EIF4A1A0A087X0R7 540 aa11.63□□□□□ -0.55
HLA-B-258ENST00000640615 FAM83GA6ND36 823 aa11.63□□□□□ -0.55
HLA-B-258ENST00000640615 CSB-PGBD3P0DP91 1061 aa11.63□□□□□ -0.55
HLA-B-258ENST00000640615 EYA1Q99502 592 aa11.63□□□□□ -0.55
HLA-B-258ENST00000640615 PNNQ9H307 717 aaKnown RBP11.63□□□□□ -0.55
HLA-B-258ENST00000640615 FCHSD2O94868 740 aa11.62□□□□□ -0.55
HLA-B-258ENST00000640615 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
HLA-B-258ENST00000640615 RUNDC1Q96C34 613 aa11.62□□□□□ -0.55
HLA-B-258ENST00000640615 CRYBG1Q9Y4K1 1723 aa11.62□□□□□ -0.55
HLA-B-258ENST00000640615 LTN1O94822 1766 aa11.62□□□□□ -0.55
HLA-B-258ENST00000640615 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.61□□□□□ -0.55
HLA-B-258ENST00000640615 EVA1CP58658 441 aa11.61□□□□□ -0.55
HLA-B-258ENST00000640615 NBPF6Q5VWK0 638 aa11.61□□□□□ -0.55
HLA-B-258ENST00000640615 AEBP1Q8IUX7 1158 aa11.61□□□□□ -0.55
HLA-B-258ENST00000640615 NGLY1Q96IV0 654 aa11.61□□□□□ -0.55
HLA-B-258ENST00000640615 NBPF4Q96M43 638 aa11.61□□□□□ -0.55
HLA-B-258ENST00000640615 RSPH6AQ9H0K4 717 aa11.61□□□□□ -0.55
HLA-B-258ENST00000640615 EP400Q96L91 3159 aa11.61□□□□□ -0.55
HLA-B-258ENST00000640615 BCL9LQ86UU0 1499 aa11.61□□□□□ -0.55
HLA-B-258ENST00000640615 APAF1O14727 1248 aa11.6□□□□□ -0.55
HLA-B-258ENST00000640615 NEFMP07197 916 aa11.6□□□□□ -0.55
HLA-B-258ENST00000640615 PRKAR2BP31323 418 aa11.6□□□□□ -0.55
HLA-B-258ENST00000640615 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
HLA-B-258ENST00000640615 NLRP2Q9NX02 1062 aa11.6□□□□□ -0.55
HLA-B-258ENST00000640615 BTG4Q9NY30 223 aa11.6□□□□□ -0.55
HLA-B-258ENST00000640615 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
HLA-B-258ENST00000640615 ERBB3P21860 1342 aa11.6□□□□□ -0.55
HLA-B-258ENST00000640615 IGSF1Q8N6C5 1336 aa11.6□□□□□ -0.55
HLA-B-258ENST00000640615 MAPK8IP3Q9UPT6 1336 aa11.6□□□□□ -0.55
HLA-B-258ENST00000640615 PLEKHF1Q96S99 279 aa11.59□□□□□ -0.55
HLA-B-258ENST00000640615 STRN4Q9NRL3 753 aa11.59□□□□□ -0.55
HLA-B-258ENST00000640615 USP21Q9UK80 565 aa11.59□□□□□ -0.55
HLA-B-258ENST00000640615 TRPC5Q9UL62 973 aaPredicted RBP11.59□□□□□ -0.55
HLA-B-258ENST00000640615 ABCA3Q99758 1704 aa11.59□□□□□ -0.55
HLA-B-258ENST00000640615 TCP11L2Q8N4U5 519 aa11.58□□□□□ -0.56
HLA-B-258ENST00000640615 ABCC6O95255 1503 aa11.58□□□□□ -0.56
HLA-B-258ENST00000640615 COL18A1P39060 1754 aa11.57□□□□□ -0.56
HLA-B-258ENST00000640615 CAMTA1Q9Y6Y1 1673 aa11.57□□□□□ -0.56
HLA-B-258ENST00000640615 NEUROD2Q15784 382 aa11.57□□□□□ -0.56
HLA-B-258ENST00000640615 TOM1L2Q6ZVM7 507 aa11.57□□□□□ -0.56
HLA-B-258ENST00000640615 PHACTR3Q96KR7 559 aa11.57□□□□□ -0.56
HLA-B-258ENST00000640615 RRP7AQ9Y3A4 280 aaKnown RBP11.57□□□□□ -0.56
HLA-B-258ENST00000640615 SRCAPQ6ZRS2 3230 aa11.57□□□□□ -0.56
HLA-B-258ENST00000640615 WDR17Q8IZU2 1322 aa11.57□□□□□ -0.56
HLA-B-258ENST00000640615 SLIT2O94813 1529 aa11.56□□□□□ -0.56
HLA-B-258ENST00000640615 LARP1Q6PKG0 1096 aaKnown RBP11.56□□□□□ -0.56
HLA-B-258ENST00000640615 COL5A2P05997 1499 aaPredicted RBP11.56□□□□□ -0.56
HLA-B-258ENST00000640615 KDRP35968 1356 aa11.55□□□□□ -0.56
HLA-B-258ENST00000640615 GLI3P10071 1580 aa11.54□□□□□ -0.56
HLA-B-258ENST00000640615 COL14A1Q05707 1796 aaKnown RBP11.54□□□□□ -0.56
HLA-B-258ENST00000640615 TMPOP42166 694 aaKnown RBP11.54□□□□□ -0.56
HLA-B-258ENST00000640615 CCDC125Q86Z20 511 aa11.54□□□□□ -0.56
HLA-B-258ENST00000640615 RAPGEF4Q8WZA2 1011 aa11.54□□□□□ -0.56
HLA-B-258ENST00000640615 CARD10Q9BWT7 1032 aa11.54□□□□□ -0.56
HLA-B-258ENST00000640615 LMO7Q8WWI1 1683 aa11.54□□□□□ -0.56
HLA-B-258ENST00000640615 RGPD1P0DJD0 1748 aa11.54□□□□□ -0.56
HLA-B-258ENST00000640615 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
HLA-B-258ENST00000640615 RIPK4P57078 832 aa11.53□□□□□ -0.56
HLA-B-258ENST00000640615 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
HLA-B-258ENST00000640615 NGEFQ8N5V2 710 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms