RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 KIF3CO14782 793 aa15.41■□□□□ 0.06
UBE3A-228ENST00000638155 MNAT1P51948 309 aa15.4■□□□□ 0.06
UBE3A-228ENST00000638155 TAOK3Q9H2K8 898 aa15.4■□□□□ 0.06
UBE3A-228ENST00000638155 NOL3O60936 208 aaKnown RBP15.4■□□□□ 0.06
UBE3A-228ENST00000638155 EXOC6Q8TAG9 804 aa15.4■□□□□ 0.06
UBE3A-228ENST00000638155 GTF2A1P52655 376 aaPredicted RBP15.4■□□□□ 0.06
UBE3A-228ENST00000638155 SPA17Q15506 151 aa15.4■□□□□ 0.06
UBE3A-228ENST00000638155 DDX46Q7L014 1031 aaKnown RBP15.4■□□□□ 0.06
UBE3A-228ENST00000638155 TRIM22Q8IYM9 498 aa15.4■□□□□ 0.06
UBE3A-228ENST00000638155 FKBP5Q13451 457 aaPredicted RBP15.4■□□□□ 0.06
UBE3A-228ENST00000638155 COG3Q96JB2 828 aa15.39■□□□□ 0.05
UBE3A-228ENST00000638155 EIF5P55010 431 aaKnown RBP15.39■□□□□ 0.05
UBE3A-228ENST00000638155 ZNF526Q8TF50 670 aaPredicted RBP15.39■□□□□ 0.05
UBE3A-228ENST00000638155 SREK1Q8WXA9 508 aaKnown RBP15.39■□□□□ 0.05
UBE3A-228ENST00000638155 FSD1Q9BTV5 496 aa15.39■□□□□ 0.05
UBE3A-228ENST00000638155 BMP2KQ9NSY1 1161 aaPredicted RBP15.39■□□□□ 0.05
UBE3A-228ENST00000638155 VPS36Q86VN1 386 aa15.38■□□□□ 0.05
UBE3A-228ENST00000638155 PABPN1LA6NDY0 278 aaKnown RBP15.38■□□□□ 0.05
UBE3A-228ENST00000638155 KIF5CO60282 957 aa15.38■□□□□ 0.05
UBE3A-228ENST00000638155 AAMPQ13685 434 aa15.38■□□□□ 0.05
UBE3A-228ENST00000638155 CCDC178Q5BJE1 867 aa15.38■□□□□ 0.05
UBE3A-228ENST00000638155 SERPINA10Q9UK55 444 aa15.38■□□□□ 0.05
UBE3A-228ENST00000638155 CEP57L1Q8IYX8 460 aa15.38■□□□□ 0.05
UBE3A-228ENST00000638155 SMTNL1A8MU46 457 aa15.37■□□□□ 0.05
UBE3A-228ENST00000638155 ANKRD1Q15327 319 aa15.37■□□□□ 0.05
UBE3A-228ENST00000638155 NECTIN2Q92692 538 aa15.37■□□□□ 0.05
UBE3A-228ENST00000638155 PRDM10Q9NQV6 1147 aa15.37■□□□□ 0.05
UBE3A-228ENST00000638155 CTR9Q6PD62 1173 aa15.37■□□□□ 0.05
UBE3A-228ENST00000638155 DNAAF4Q8WXU2 420 aa15.37■□□□□ 0.05
UBE3A-228ENST00000638155 ZSCAN12O43309 604 aa15.37■□□□□ 0.05
UBE3A-228ENST00000638155 TSNARE1Q96NA8 513 aa15.37■□□□□ 0.05
UBE3A-228ENST00000638155 SETSIPP0DME0 302 aa15.36■□□□□ 0.05
UBE3A-228ENST00000638155 RAB3IL1Q8TBN0 382 aa15.36■□□□□ 0.05
UBE3A-228ENST00000638155 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
UBE3A-228ENST00000638155 BBXQ8WY36 941 aaPredicted RBP15.36■□□□□ 0.05
UBE3A-228ENST00000638155 GRPEL1Q9HAV7 217 aa15.36■□□□□ 0.05
UBE3A-228ENST00000638155 PRKCSHP14314 528 aaPredicted RBP15.35■□□□□ 0.05
UBE3A-228ENST00000638155 HSPA4P34932 840 aa15.35■□□□□ 0.05
UBE3A-228ENST00000638155 GTPBP4Q9BZE4 634 aaKnown RBP15.35■□□□□ 0.05
UBE3A-228ENST00000638155 FSD2A1L4K1 749 aa15.35■□□□□ 0.05
UBE3A-228ENST00000638155 CTNNBL1Q8WYA6 563 aaPredicted RBP15.35■□□□□ 0.05
UBE3A-228ENST00000638155 CARMIL2Q6F5E8 1435 aa15.35■□□□□ 0.05
UBE3A-228ENST00000638155 KIF18AQ8NI77 898 aa15.35■□□□□ 0.05
UBE3A-228ENST00000638155 UPF3BQ9BZI7 483 aaKnown RBP15.35■□□□□ 0.05
UBE3A-228ENST00000638155 KRT85P78386 507 aa15.35■□□□□ 0.05
UBE3A-228ENST00000638155 CBX1P83916 185 aa15.35■□□□□ 0.05
UBE3A-228ENST00000638155 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
UBE3A-228ENST00000638155 NOL7Q9UMY1 257 aaKnown RBP15.35■□□□□ 0.05
UBE3A-228ENST00000638155 POTEB2H3BUK9 544 aa15.35■□□□□ 0.05
UBE3A-228ENST00000638155 FBF1Q8TES7 1133 aa15.34■□□□□ 0.05
UBE3A-228ENST00000638155 CCDC57Q2TAC2 916 aa15.34■□□□□ 0.05
UBE3A-228ENST00000638155 LARP1Q6PKG0 1096 aaKnown RBP15.34■□□□□ 0.05
UBE3A-228ENST00000638155 FILIP1Q7Z7B0 1213 aa15.34■□□□□ 0.05
UBE3A-228ENST00000638155 UACAQ9BZF9 1416 aa15.34■□□□□ 0.05
UBE3A-228ENST00000638155 CPSF2Q9P2I0 782 aaKnown RBP15.34■□□□□ 0.05
UBE3A-228ENST00000638155 WDR33Q9C0J8 1336 aaKnown RBP15.34■□□□□ 0.05
UBE3A-228ENST00000638155 WDHD1O75717 1129 aaPredicted RBP15.34■□□□□ 0.05
UBE3A-228ENST00000638155 SWAP70Q9UH65 585 aa15.34■□□□□ 0.05
UBE3A-228ENST00000638155 CDKL5O76039 1030 aa15.33■□□□□ 0.05
UBE3A-228ENST00000638155 TMEM87AQ8NBN3 555 aa15.33■□□□□ 0.05
UBE3A-228ENST00000638155 NUP155O75694 1391 aa15.33■□□□□ 0.05
UBE3A-228ENST00000638155 CCDC150Q8NCX0 1101 aa15.33■□□□□ 0.05
UBE3A-228ENST00000638155 PPP1R14CQ8TAE6 165 aa15.33■□□□□ 0.05
UBE3A-228ENST00000638155 TNIKQ9UKE5 1360 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 ATP2B2Q01814 1243 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 PTPN14Q15678 1187 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 CCDC6Q16204 474 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 SPECC1Q5M775 1068 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 CEP112Q8N8E3 955 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 CCDC69A6NI79 296 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 IRX3P78415 501 aaPredicted RBP15.33■□□□□ 0.04
UBE3A-228ENST00000638155 SSX2IPQ9Y2D8 614 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 CEP83Q9Y592 693 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 NEK4P51957 841 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 MSL1Q68DK7 614 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 IKBKGQ9Y6K9 419 aa15.33■□□□□ 0.04
UBE3A-228ENST00000638155 ANKS4BQ8N8V4 417 aa15.32■□□□□ 0.04
UBE3A-228ENST00000638155 PSMD1Q99460 953 aa15.32■□□□□ 0.04
UBE3A-228ENST00000638155 RAI14Q9P0K7 980 aa15.32■□□□□ 0.04
UBE3A-228ENST00000638155 ANAPC4Q9UJX5 808 aa15.32■□□□□ 0.04
UBE3A-228ENST00000638155 UBTFL1P0CB47 393 aaPredicted RBP15.32■□□□□ 0.04
UBE3A-228ENST00000638155 CTNNA2P26232 953 aa15.32■□□□□ 0.04
UBE3A-228ENST00000638155 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.32■□□□□ 0.04
UBE3A-228ENST00000638155 SFPQP23246 707 aaKnown RBP eCLIP15.32■□□□□ 0.04
UBE3A-228ENST00000638155 MPHOSPH10O00566 681 aaKnown RBP15.32■□□□□ 0.04
UBE3A-228ENST00000638155 SMARCC1Q92922 1105 aaPredicted RBP15.32■□□□□ 0.04
UBE3A-228ENST00000638155 NAA15Q9BXJ9 866 aaKnown RBP15.32■□□□□ 0.04
UBE3A-228ENST00000638155 CFAP100Q494V2 611 aa15.31■□□□□ 0.04
UBE3A-228ENST00000638155 MACROD2A1Z1Q3 448 aa15.31■□□□□ 0.04
UBE3A-228ENST00000638155 RIC3Q7Z5B4 369 aa15.31■□□□□ 0.04
UBE3A-228ENST00000638155 GTF2F1P35269 517 aaKnown RBP eCLIP15.3■□□□□ 0.046e-11■■■■■ 42.3
UBE3A-228ENST00000638155 PSME1Q06323 249 aa15.3■□□□□ 0.04
UBE3A-228ENST00000638155 NSRP1Q9H0G5 558 aaKnown RBP15.3■□□□□ 0.04
UBE3A-228ENST00000638155 CFAP58Q5T655 872 aa15.3■□□□□ 0.04
UBE3A-228ENST00000638155 DDX12PQ92771 950 aa15.3■□□□□ 0.04
UBE3A-228ENST00000638155 SSBP05455 408 aaKnown RBP eCLIP15.3■□□□□ 0.04
UBE3A-228ENST00000638155 MXRA7P84157 204 aa15.3■□□□□ 0.04
UBE3A-228ENST00000638155 APBB1IPQ7Z5R6 666 aaPredicted RBP15.3■□□□□ 0.04
UBE3A-228ENST00000638155 SPATA32Q96LK8 384 aa15.3■□□□□ 0.04
UBE3A-228ENST00000638155 GNL3LQ9NVN8 582 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms