RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 INTS3Q68E01 1043 aaKnown RBP10.44□□□□□ -0.74
CHD2-226ENST00000636881 GGNBP2Q9H3C7 697 aa10.44□□□□□ -0.74
CHD2-226ENST00000636881 ANKRD36BQ8N2N9 1353 aa10.44□□□□□ -0.74
CHD2-226ENST00000636881 ZGPATQ8N5A5 531 aaKnown RBP10.44□□□□□ -0.74
CHD2-226ENST00000636881 TMEM63CQ9P1W3 806 aa10.44□□□□□ -0.74
CHD2-226ENST00000636881 NEURL4Q96JN8 1562 aa10.44□□□□□ -0.74
CHD2-226ENST00000636881 GSPT1P15170 499 aaKnown RBP10.44□□□□□ -0.74
CHD2-226ENST00000636881 MBD3O95983 291 aa10.43□□□□□ -0.74
CHD2-226ENST00000636881 ZNF428Q96B54 188 aa10.43□□□□□ -0.74
CHD2-226ENST00000636881 CCDC94Q9BW85 323 aaPredicted RBP10.43□□□□□ -0.74
CHD2-226ENST00000636881 USP26Q9BXU7 913 aa10.43□□□□□ -0.74
CHD2-226ENST00000636881 ZHX1Q9UKY1 873 aaPredicted RBP10.43□□□□□ -0.74
CHD2-226ENST00000636881 DIAPH1O60610 1272 aaKnown RBP10.42□□□□□ -0.74
CHD2-226ENST00000636881 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
CHD2-226ENST00000636881 MED14O60244 1454 aa10.42□□□□□ -0.74
CHD2-226ENST00000636881 DEPDC5O75140 1603 aa10.42□□□□□ -0.74
CHD2-226ENST00000636881 TTC22Q5TAA0 569 aa10.42□□□□□ -0.74
CHD2-226ENST00000636881 PLEKHM2Q8IWE5 1019 aa10.42□□□□□ -0.74
CHD2-226ENST00000636881 TSPY26PQ9H489 355 aa10.42□□□□□ -0.74
CHD2-226ENST00000636881 ZC3H13Q5T200 1668 aaKnown RBP10.42□□□□□ -0.74
CHD2-226ENST00000636881 REREQ9P2R6 1566 aa10.42□□□□□ -0.74
CHD2-226ENST00000636881 SETBP1Q9Y6X0 1596 aa10.42□□□□□ -0.74
CHD2-226ENST00000636881 ELL2O00472 640 aaPredicted RBP10.42□□□□□ -0.74
CHD2-226ENST00000636881 SIRT2Q8IXJ6 389 aa10.42□□□□□ -0.74
CHD2-226ENST00000636881 MRPL50Q8N5N7 158 aaKnown RBP10.42□□□□□ -0.74
CHD2-226ENST00000636881 IFT172Q9UG01 1749 aa10.42□□□□□ -0.74
CHD2-226ENST00000636881 ZFYVE16Q7Z3T8 1539 aa10.41□□□□□ -0.74
CHD2-226ENST00000636881 SYAP1Q96A49 352 aaPredicted RBP10.41□□□□□ -0.74
CHD2-226ENST00000636881 CHAMP1Q96JM3 812 aa10.41□□□□□ -0.74
CHD2-226ENST00000636881 C14orf93Q9H972 538 aaKnown RBP10.41□□□□□ -0.74
CHD2-226ENST00000636881 MROH2AA6NES4 1674 aa10.41□□□□□ -0.74
CHD2-226ENST00000636881 SAFB2Q14151 953 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHD2-226ENST00000636881 PPRC1Q5VV67 1664 aaKnown RBP10.41□□□□□ -0.74
CHD2-226ENST00000636881 A0A0U1RQG5 324 aaPredicted RBP10.41□□□□□ -0.74
CHD2-226ENST00000636881 ARHGAP45Q92619 1136 aa10.41□□□□□ -0.74
CHD2-226ENST00000636881 NSFL1CQ9UNZ2 370 aaKnown RBP10.41□□□□□ -0.74
CHD2-226ENST00000636881 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHD2-226ENST00000636881 ZDHHC9Q9Y397 364 aa10.4□□□□□ -0.74
CHD2-226ENST00000636881 NRXN1Q9ULB1 1477 aa10.4□□□□□ -0.74
CHD2-226ENST00000636881 MYRIPQ8NFW9 859 aa10.4□□□□□ -0.74
CHD2-226ENST00000636881 INO80Q9ULG1 1556 aaPredicted RBP10.4□□□□□ -0.74
CHD2-226ENST00000636881 REC8O95072 547 aa10.4□□□□□ -0.75
CHD2-226ENST00000636881 BRPF1P55201 1214 aaPredicted RBP10.4□□□□□ -0.75
CHD2-226ENST00000636881 SRPK2P78362 688 aaKnown RBP10.4□□□□□ -0.75
CHD2-226ENST00000636881 APBB1O00213 710 aa10.39□□□□□ -0.75
CHD2-226ENST00000636881 VAMP4O75379 141 aa10.39□□□□□ -0.75
CHD2-226ENST00000636881 MPNDQ8N594 471 aa10.39□□□□□ -0.75
CHD2-226ENST00000636881 API5Q9BZZ5 524 aaKnown RBP10.39□□□□□ -0.75
CHD2-226ENST00000636881 HMGN5P82970 282 aaKnown RBP10.39□□□□□ -0.75
CHD2-226ENST00000636881 C16orf71Q8IYS4 520 aaPredicted RBP10.39□□□□□ -0.75
CHD2-226ENST00000636881 PTCH1Q13635 1447 aa10.39□□□□□ -0.75
CHD2-226ENST00000636881 PRKAR2BP31323 418 aa10.38□□□□□ -0.75
CHD2-226ENST00000636881 PUS7Q96PZ0 661 aaKnown RBP10.38□□□□□ -0.75
CHD2-226ENST00000636881 PHF14O94880 888 aa10.38□□□□□ -0.75
CHD2-226ENST00000636881 DMTNQ08495 405 aa10.38□□□□□ -0.75
CHD2-226ENST00000636881 PRIMPOLQ96LW4 560 aa10.38□□□□□ -0.75
CHD2-226ENST00000636881 VWDEQ8N2E2 1590 aa10.38□□□□□ -0.75
CHD2-226ENST00000636881 TSPYL6Q8N831 410 aa10.38□□□□□ -0.75
CHD2-226ENST00000636881 THUMPD2Q9BTF0 503 aaKnown RBP10.38□□□□□ -0.75
CHD2-226ENST00000636881 PIK3R4Q99570 1358 aa10.38□□□□□ -0.75
CHD2-226ENST00000636881 ABCC4O15439 1325 aa10.38□□□□□ -0.75
CHD2-226ENST00000636881 A0A1W2PP64 1363 aa10.37□□□□□ -0.75
CHD2-226ENST00000636881 SDSP20132 328 aa10.37□□□□□ -0.75
CHD2-226ENST00000636881 GNAI1P63096 354 aa10.37□□□□□ -0.75
CHD2-226ENST00000636881 UTP14CQ5TAP6 766 aaKnown RBP10.37□□□□□ -0.75
CHD2-226ENST00000636881 DCTPP1Q9H773 170 aa10.37□□□□□ -0.75
CHD2-226ENST00000636881 ATP7AQ04656 1500 aa10.37□□□□□ -0.75
CHD2-226ENST00000636881 COL3A1P02461 1466 aaPredicted RBP10.37□□□□□ -0.75
CHD2-226ENST00000636881 FCHSD2O94868 740 aa10.37□□□□□ -0.75
CHD2-226ENST00000636881 CBX1P83916 185 aa10.37□□□□□ -0.75
CHD2-226ENST00000636881 NEK4P51957 841 aa10.37□□□□□ -0.75
CHD2-226ENST00000636881 FOXD4L6Q3SYB3 417 aaPredicted RBP10.37□□□□□ -0.75
CHD2-226ENST00000636881 FOXD4L3Q6VB84 417 aaPredicted RBP10.37□□□□□ -0.75
CHD2-226ENST00000636881 TSC1Q92574 1164 aa10.37□□□□□ -0.75
CHD2-226ENST00000636881 CFAP65Q6ZU64 1925 aaKnown RBP10.36□□□□□ -0.75
CHD2-226ENST00000636881 ERC2O15083 957 aa10.36□□□□□ -0.75
CHD2-226ENST00000636881 TWISTNBQ3B726 338 aaPredicted RBP10.36□□□□□ -0.75
CHD2-226ENST00000636881 NUTM2DQ5VT03 806 aaPredicted RBP10.36□□□□□ -0.75
CHD2-226ENST00000636881 ZNF830Q96NB3 372 aaPredicted RBP10.36□□□□□ -0.75
CHD2-226ENST00000636881 TERF2IPQ9NYB0 399 aa10.36□□□□□ -0.75
CHD2-226ENST00000636881 NOLC1Q14978 699 aaKnown RBP eCLIP10.36□□□□□ -0.75
CHD2-226ENST00000636881 NOL8Q76FK4 1167 aaKnown RBP10.36□□□□□ -0.75
CHD2-226ENST00000636881 OTUD7AQ8TE49 926 aaPredicted RBP10.36□□□□□ -0.75
CHD2-226ENST00000636881 JARID2Q92833 1246 aaPredicted RBP10.36□□□□□ -0.75
CHD2-226ENST00000636881 TULP4Q9NRJ4 1543 aa10.36□□□□□ -0.75
CHD2-226ENST00000636881 EFCAB6Q5THR3 1501 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 ATAD2Q6PL18 1390 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 SMARCA5O60264 1052 aaPredicted RBP10.35□□□□□ -0.75
CHD2-226ENST00000636881 PLEKHG5O94827 1062 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 NFE2L2Q16236 605 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 PIBF1Q8WXW3 757 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 TMX3Q96JJ7 454 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 ADGRB1O14514 1584 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 ADGRB3O60242 1522 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 FYB1O15117 783 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 TPRNQ4KMQ1 711 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 USP25Q9UHP3 1055 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 KIF3AQ9Y496 699 aa10.35□□□□□ -0.75
CHD2-226ENST00000636881 HMOX1P09601 288 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 MCM2P49736 904 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms