RNA–Protein interactions for RNA: ENST00000636476.1

OBSCN-213, Transcript of obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, humanhuman

TSL 1 (best)

Gene OBSCN, Length 7,835 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OBSCN-213ENST00000636476 TTLL12Q14166 644 aaPredicted RBP15.92■□□□□ 0.14
OBSCN-213ENST00000636476 FKBP4Q02790 459 aaKnown RBP eCLIP15.92■□□□□ 0.14
OBSCN-213ENST00000636476 SMARCE1Q969G3 411 aa15.92■□□□□ 0.14
OBSCN-213ENST00000636476 TSR2Q969E8 191 aaKnown RBP15.92■□□□□ 0.14
OBSCN-213ENST00000636476 ZNF396Q96N95 335 aaPredicted RBP15.92■□□□□ 0.14
OBSCN-213ENST00000636476 STK3Q13188 491 aa15.92■□□□□ 0.14
OBSCN-213ENST00000636476 SLC12A5Q9H2X9 1139 aa15.92■□□□□ 0.14
OBSCN-213ENST00000636476 TTC16Q8NEE8 873 aa15.91■□□□□ 0.14
OBSCN-213ENST00000636476 C9orf84Q5VXU9 1444 aa15.91■□□□□ 0.14
OBSCN-213ENST00000636476 SCAPERQ9BY12 1400 aa15.91■□□□□ 0.14
OBSCN-213ENST00000636476 LRRCC1Q9C099 1032 aa15.91■□□□□ 0.14
OBSCN-213ENST00000636476 SPG7Q9UQ90 795 aa15.91■□□□□ 0.14
OBSCN-213ENST00000636476 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
OBSCN-213ENST00000636476 DHX37Q8IY37 1157 aaKnown RBP15.91■□□□□ 0.14
OBSCN-213ENST00000636476 ZHX3Q9H4I2 956 aa15.9■□□□□ 0.14
OBSCN-213ENST00000636476 CCDC69A6NI79 296 aa15.9■□□□□ 0.14
OBSCN-213ENST00000636476 CCT4P50991 539 aaKnown RBP15.9■□□□□ 0.14
OBSCN-213ENST00000636476 ZNF219Q9P2Y4 722 aaPredicted RBP15.9■□□□□ 0.14
OBSCN-213ENST00000636476 FIBPO43427 364 aa15.9■□□□□ 0.14
OBSCN-213ENST00000636476 NACAP1Q9BZK3 213 aa15.9■□□□□ 0.14
OBSCN-213ENST00000636476 CCDC39Q9UFE4 941 aa15.9■□□□□ 0.14
OBSCN-213ENST00000636476 BTBD11A6QL63 1104 aa15.9■□□□□ 0.14
OBSCN-213ENST00000636476 NFKBIBQ15653 356 aa15.89■□□□□ 0.14
OBSCN-213ENST00000636476 ZNF530Q6P9A1 599 aaPredicted RBP15.89■□□□□ 0.14
OBSCN-213ENST00000636476 ZNF692Q9BU19 519 aaPredicted RBP15.89■□□□□ 0.14
OBSCN-213ENST00000636476 PRG4Q92954 1404 aaPredicted RBP15.89■□□□□ 0.13
OBSCN-213ENST00000636476 EHBP1L1Q8N3D4 1523 aa15.89■□□□□ 0.13
OBSCN-213ENST00000636476 STK38Q15208 465 aa15.89■□□□□ 0.13
OBSCN-213ENST00000636476 GCC1Q96CN9 775 aa15.89■□□□□ 0.13
OBSCN-213ENST00000636476 TRIM22Q8IYM9 498 aa15.89■□□□□ 0.13
OBSCN-213ENST00000636476 WWC3Q9ULE0 1092 aa15.89■□□□□ 0.13
OBSCN-213ENST00000636476 PRPF40AO75400 957 aaKnown RBP15.88■□□□□ 0.13
OBSCN-213ENST00000636476 MATR3P43243 847 aaKnown RBP eCLIP15.88■□□□□ 0.13
OBSCN-213ENST00000636476 TRAK2O60296 914 aa15.88■□□□□ 0.13
OBSCN-213ENST00000636476 CYP46A1Q9Y6A2 500 aa15.88■□□□□ 0.13
OBSCN-213ENST00000636476 ANKRD1Q15327 319 aa15.88■□□□□ 0.13
OBSCN-213ENST00000636476 NUP133Q8WUM0 1156 aa15.88■□□□□ 0.13
OBSCN-213ENST00000636476 BICDL1Q6ZP65 573 aa15.87■□□□□ 0.13
OBSCN-213ENST00000636476 PDZRN3Q9UPQ7 1066 aa15.87■□□□□ 0.13
OBSCN-213ENST00000636476 NBPF1Q3BBV0 1214 aa15.87■□□□□ 0.13
OBSCN-213ENST00000636476 SPC24Q8NBT2 197 aa15.87■□□□□ 0.13
OBSCN-213ENST00000636476 WDR78Q5VTH9 848 aa15.87■□□□□ 0.13
OBSCN-213ENST00000636476 MPHOSPH10O00566 681 aaKnown RBP15.87■□□□□ 0.13
OBSCN-213ENST00000636476 ZSCAN29Q8IWY8 852 aaPredicted RBP15.87■□□□□ 0.13
OBSCN-213ENST00000636476 JMYQ8N9B5 988 aa15.87■□□□□ 0.13
OBSCN-213ENST00000636476 TSPY26PQ9H489 355 aa15.87■□□□□ 0.13
OBSCN-213ENST00000636476 PODXL2Q9NZ53 605 aa15.87■□□□□ 0.13
OBSCN-213ENST00000636476 RTEL1-TNFRSF6BF6WH68 1400 aa15.86■□□□□ 0.13
OBSCN-213ENST00000636476 RABEP1Q15276 862 aa15.86■□□□□ 0.13
OBSCN-213ENST00000636476 RRS1Q15050 365 aaKnown RBP15.86■□□□□ 0.13
OBSCN-213ENST00000636476 ME1P48163 572 aa15.86■□□□□ 0.13
OBSCN-213ENST00000636476 STIM1Q13586 685 aa15.86■□□□□ 0.13
OBSCN-213ENST00000636476 MBD3O95983 291 aa15.86■□□□□ 0.13
OBSCN-213ENST00000636476 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
OBSCN-213ENST00000636476 ZNHIT6Q9NWK9 470 aaKnown RBP15.86■□□□□ 0.13
OBSCN-213ENST00000636476 BCAR3O75815 825 aa15.85■□□□□ 0.13
OBSCN-213ENST00000636476 PNISRQ8TF01 805 aaKnown RBP15.85■□□□□ 0.13
OBSCN-213ENST00000636476 PRDM11Q9NQV5 511 aa15.85■□□□□ 0.13
OBSCN-213ENST00000636476 MAP7D2Q96T17 732 aa15.85■□□□□ 0.13
OBSCN-213ENST00000636476 SERPINC1P01008 464 aa15.85■□□□□ 0.13
OBSCN-213ENST00000636476 SLC26A8Q96RN1 970 aa15.85■□□□□ 0.13
OBSCN-213ENST00000636476 TDO2P48775 406 aa15.84■□□□□ 0.13
OBSCN-213ENST00000636476 XPCQ01831 940 aaPredicted RBP15.84■□□□□ 0.13
OBSCN-213ENST00000636476 ZSCAN25Q6NSZ9 544 aa15.84■□□□□ 0.13
OBSCN-213ENST00000636476 ERBINQ96RT1 1412 aa15.84■□□□□ 0.13
OBSCN-213ENST00000636476 AACSQ86V21 672 aa15.84■□□□□ 0.13
OBSCN-213ENST00000636476 ANKLE2Q86XL3 938 aa15.84■□□□□ 0.13
OBSCN-213ENST00000636476 MRE11P49959 708 aa15.84■□□□□ 0.13
OBSCN-213ENST00000636476 NOM1Q5C9Z4 860 aaKnown RBP15.84■□□□□ 0.13
OBSCN-213ENST00000636476 PSMD1Q99460 953 aa15.84■□□□□ 0.13
OBSCN-213ENST00000636476 PDCL3Q9H2J4 239 aa15.83■□□□□ 0.13
OBSCN-213ENST00000636476 SYNJ1O43426 1573 aa15.83■□□□□ 0.13
OBSCN-213ENST00000636476 NEFHP12036 1026 aa15.83■□□□□ 0.13
OBSCN-213ENST00000636476 PLEKHH2Q8IVE3 1493 aa15.83■□□□□ 0.13
OBSCN-213ENST00000636476 DCTN1Q14203 1278 aa15.83■□□□□ 0.12
OBSCN-213ENST00000636476 SOGA3Q5TF21 947 aa15.83■□□□□ 0.12
OBSCN-213ENST00000636476 ERCC4Q92889 916 aaPredicted RBP15.83■□□□□ 0.12
OBSCN-213ENST00000636476 DEF6Q9H4E7 631 aa15.83■□□□□ 0.12
OBSCN-213ENST00000636476 SRGAP3O43295 1099 aa15.82■□□□□ 0.12
OBSCN-213ENST00000636476 PDE3AQ14432 1141 aa15.82■□□□□ 0.12
OBSCN-213ENST00000636476 TANGO6Q9C0B7 1094 aa15.82■□□□□ 0.12
OBSCN-213ENST00000636476 SRCIN1Q9C0H9 1055 aa15.82■□□□□ 0.12
OBSCN-213ENST00000636476 CC2D2AQ9P2K1 1620 aa15.82■□□□□ 0.12
OBSCN-213ENST00000636476 EFCAB5A4FU69 1503 aa15.82■□□□□ 0.12
OBSCN-213ENST00000636476 LRP2BPQ9P2M1 347 aa15.82■□□□□ 0.12
OBSCN-213ENST00000636476 HFM1A2PYH4 1435 aa15.82■□□□□ 0.12
OBSCN-213ENST00000636476 CWC27Q6UX04 472 aaKnown RBP15.82■□□□□ 0.12
OBSCN-213ENST00000636476 AKNAQ7Z591 1439 aa15.82■□□□□ 0.12
OBSCN-213ENST00000636476 CCP110O43303 1012 aa15.81■□□□□ 0.12
OBSCN-213ENST00000636476 PIP4K2AP48426 406 aaPredicted RBP15.81■□□□□ 0.12
OBSCN-213ENST00000636476 TNMDQ9H2S6 317 aa15.81■□□□□ 0.12
OBSCN-213ENST00000636476 KIAA1107Q9UPP5 1409 aa15.81■□□□□ 0.12
OBSCN-213ENST00000636476 ANKRD62A6NC57 917 aa15.81■□□□□ 0.12
OBSCN-213ENST00000636476 SLC52A1Q9NWF4 448 aa15.81■□□□□ 0.12
OBSCN-213ENST00000636476 ATF7IPQ6VMQ6 1270 aa15.81■□□□□ 0.12
OBSCN-213ENST00000636476 PIBF1Q8WXW3 757 aa15.81■□□□□ 0.12
OBSCN-213ENST00000636476 AEBP1Q8IUX7 1158 aa15.81■□□□□ 0.12
OBSCN-213ENST00000636476 CCDC85AQ96PX6 553 aaPredicted RBP15.81■□□□□ 0.12
OBSCN-213ENST00000636476 PPFIBP1Q86W92 1011 aa15.8■□□□□ 0.12
OBSCN-213ENST00000636476 LUC7LQ9NQ29 371 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms