RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 RGPD1P0DJD0 1748 aa26.59■■□□□ 1.85
CLN6-213ENST00000636212 TMF1P82094 1093 aa26.59■■□□□ 1.85
CLN6-213ENST00000636212 USP31Q70CQ4 1352 aa26.58■■□□□ 1.85
CLN6-213ENST00000636212 USP47Q96K76 1375 aa26.58■■□□□ 1.85
CLN6-213ENST00000636212 CSB-PGBD3P0DP91 1061 aa26.58■■□□□ 1.85
CLN6-213ENST00000636212 NME9Q86XW9 330 aa26.58■■□□□ 1.85
CLN6-213ENST00000636212 A0A1W2PP64 1363 aa26.58■■□□□ 1.84
CLN6-213ENST00000636212 WDR17Q8IZU2 1322 aa26.57■■□□□ 1.84
CLN6-213ENST00000636212 COL18A1P39060 1754 aa26.56■■□□□ 1.84
CLN6-213ENST00000636212 CDCA8Q53HL2 280 aa26.55■■□□□ 1.84
CLN6-213ENST00000636212 AXIN2Q9Y2T1 843 aa26.55■■□□□ 1.84
CLN6-213ENST00000636212 NFAT5O94916 1531 aa26.55■■□□□ 1.84
CLN6-213ENST00000636212 C11orf95C9JLR9 678 aaPredicted RBP26.54■■□□□ 1.84
CLN6-213ENST00000636212 ABCC6O95255 1503 aa26.53■■□□□ 1.84
CLN6-213ENST00000636212 USP54Q70EL1 1684 aa26.53■■□□□ 1.84
CLN6-213ENST00000636212 TRIM37O94972 964 aa26.52■■□□□ 1.84
CLN6-213ENST00000636212 CDCA7Q9BWT1 371 aaPredicted RBP26.52■■□□□ 1.84
CLN6-213ENST00000636212 PARP4Q9UKK3 1724 aaKnown RBP26.52■■□□□ 1.84
CLN6-213ENST00000636212 EN1Q05925 392 aaPredicted RBP26.51■■□□□ 1.83
CLN6-213ENST00000636212 DDB1Q16531 1140 aa26.5■■□□□ 1.83
CLN6-213ENST00000636212 CCER1Q8TC90 406 aaPredicted RBP26.49■■□□□ 1.83
CLN6-213ENST00000636212 CARD10Q9BWT7 1032 aa26.49■■□□□ 1.83
CLN6-213ENST00000636212 DISP2A7MBM2 1401 aa26.48■■□□□ 1.83
CLN6-213ENST00000636212 APBA3O96018 575 aa26.47■■□□□ 1.83
CLN6-213ENST00000636212 COG3Q96JB2 828 aa26.47■■□□□ 1.83
CLN6-213ENST00000636212 RGPD5Q99666 1765 aa26.47■■□□□ 1.83
CLN6-213ENST00000636212 TNS1Q9HBL0 1735 aaKnown RBP26.47■■□□□ 1.83
CLN6-213ENST00000636212 ANKRD36BQ8N2N9 1353 aa26.46■■□□□ 1.83
CLN6-213ENST00000636212 CCDC7Q96M83 1385 aa26.46■■□□□ 1.83
CLN6-213ENST00000636212 OVOS2A0A0G2JMS6 1433 aa26.45■■□□□ 1.82
CLN6-213ENST00000636212 OVOS2A0A0J9YW53 1432 aa26.45■■□□□ 1.82
CLN6-213ENST00000636212 OVOS2Q6IE36 1432 aa26.45■■□□□ 1.82
CLN6-213ENST00000636212 LTN1O94822 1766 aa26.43■■□□□ 1.82
CLN6-213ENST00000636212 LRRC37A3O60309 1634 aa26.43■■□□□ 1.82
CLN6-213ENST00000636212 PARD3Q8TEW0 1356 aa26.42■■□□□ 1.82
CLN6-213ENST00000636212 WNK3Q9BYP7 1800 aa26.42■■□□□ 1.82
CLN6-213ENST00000636212 EZH2Q15910 746 aaKnown RBP26.41■■□□□ 1.82
CLN6-213ENST00000636212 NLRP2Q9NX02 1062 aa26.41■■□□□ 1.82
CLN6-213ENST00000636212 ERBB3P21860 1342 aa26.4■■□□□ 1.82
CLN6-213ENST00000636212 EXOC5O00471 708 aa26.4■■□□□ 1.82
CLN6-213ENST00000636212 ANKRD24Q8TF21 1146 aa26.39■■□□□ 1.82
CLN6-213ENST00000636212 CAMKK2Q96RR4 588 aa26.38■■□□□ 1.81
CLN6-213ENST00000636212 PSDA5PKW4 1024 aaPredicted RBP26.36■■□□□ 1.81
CLN6-213ENST00000636212 IP6K1Q92551 441 aa26.36■■□□□ 1.81
CLN6-213ENST00000636212 AMPHP49418 695 aa26.35■■□□□ 1.81
CLN6-213ENST00000636212 IL2RBP14784 551 aa26.33■■□□□ 1.81
CLN6-213ENST00000636212 MARCH10Q8NA82 808 aaPredicted RBP26.33■■□□□ 1.81
CLN6-213ENST00000636212 PEAK1Q9H792 1746 aa26.33■■□□□ 1.81
CLN6-213ENST00000636212 NBPF14Q5TI25 921 aa26.32■■□□□ 1.8
CLN6-213ENST00000636212 GGNBP2Q9H3C7 697 aa26.32■■□□□ 1.8
CLN6-213ENST00000636212 FYB1O15117 783 aa26.31■■□□□ 1.8
CLN6-213ENST00000636212 R3HDM1Q15032 1099 aaKnown RBP26.31■■□□□ 1.8
CLN6-213ENST00000636212 LTV1Q96GA3 475 aaPredicted RBP26.31■■□□□ 1.8
CLN6-213ENST00000636212 BCL11BQ9C0K0 894 aaPredicted RBP26.31■■□□□ 1.8
CLN6-213ENST00000636212 MAP3K19Q56UN5 1328 aa26.31■■□□□ 1.8
CLN6-213ENST00000636212 TNS2Q63HR2 1409 aa26.31■■□□□ 1.8
CLN6-213ENST00000636212 EIF4G2P78344 907 aaKnown RBP eCLIP26.3■■□□□ 1.8
CLN6-213ENST00000636212 BCL9O00512 1426 aa26.3■■□□□ 1.8
CLN6-213ENST00000636212 FAM208AQ9UK61 1670 aaKnown RBP26.28■■□□□ 1.8
CLN6-213ENST00000636212 HOXC9P31274 260 aa26.28■■□□□ 1.8
CLN6-213ENST00000636212 POLR3GLQ9BT43 218 aa26.28■■□□□ 1.8
CLN6-213ENST00000636212 RTL1A6NKG5 1358 aa26.27■■□□□ 1.8
CLN6-213ENST00000636212 SBF2Q86WG5 1849 aa26.26■■□□□ 1.79
CLN6-213ENST00000636212 KIF20BQ96Q89 1820 aa26.26■■□□□ 1.79
CLN6-213ENST00000636212 RREB1Q92766 1687 aa26.26■■□□□ 1.79
CLN6-213ENST00000636212 PLSCR1O15162 318 aa26.26■■□□□ 1.79
CLN6-213ENST00000636212 NSD3Q9BZ95 1437 aa26.24■■□□□ 1.79
CLN6-213ENST00000636212 FBLN1P23142 703 aa26.24■■□□□ 1.79
CLN6-213ENST00000636212 MYOM1P52179 1685 aa26.24■■□□□ 1.79
CLN6-213ENST00000636212 SMG6Q86US8 1419 aaKnown RBP26.23■■□□□ 1.79
CLN6-213ENST00000636212 RRS1Q15050 365 aaKnown RBP26.23■■□□□ 1.79
CLN6-213ENST00000636212 RGPD3A6NKT7 1758 aaPredicted RBP26.22■■□□□ 1.79
CLN6-213ENST00000636212 RGPD4Q7Z3J3 1758 aa26.22■■□□□ 1.79
CLN6-213ENST00000636212 NUP188Q5SRE5 1749 aa26.22■■□□□ 1.79
CLN6-213ENST00000636212 LRP5O75197 1615 aa26.21■■□□□ 1.79
CLN6-213ENST00000636212 HSPA5P11021 654 aaKnown RBP26.21■■□□□ 1.79
CLN6-213ENST00000636212 CARD14Q9BXL6 1004 aa26.21■■□□□ 1.79
CLN6-213ENST00000636212 CGNL1Q0VF96 1302 aa26.19■■□□□ 1.78
CLN6-213ENST00000636212 KIF24Q5T7B8 1368 aa26.18■■□□□ 1.78
CLN6-213ENST00000636212 PTF1AQ7RTS3 328 aa26.17■■□□□ 1.78
CLN6-213ENST00000636212 ACSBG1Q96GR2 724 aa26.17■■□□□ 1.78
CLN6-213ENST00000636212 FLT4P35916 1363 aa26.17■■□□□ 1.78
CLN6-213ENST00000636212 DDX54Q8TDD1 881 aaKnown RBP26.16■■□□□ 1.78
CLN6-213ENST00000636212 INSRP06213 1382 aa26.14■■□□□ 1.78
CLN6-213ENST00000636212 NHSQ6T4R5 1651 aa26.14■■□□□ 1.78
CLN6-213ENST00000636212 KCNQ2O43526 872 aa26.13■■□□□ 1.77
CLN6-213ENST00000636212 ZCRB1Q8TBF4 217 aaKnown RBP26.12■■□□□ 1.77
CLN6-213ENST00000636212 RAPGEF4Q8WZA2 1011 aa26.12■■□□□ 1.77
CLN6-213ENST00000636212 TXNRD1Q16881 649 aa26.11■■□□□ 1.77
CLN6-213ENST00000636212 HSP90AB2PQ58FF8 381 aa26.11■■□□□ 1.77
CLN6-213ENST00000636212 PPM1GO15355 546 aaPredicted RBP26.1■■□□□ 1.77
CLN6-213ENST00000636212 NBPF6Q5VWK0 638 aa26.1■■□□□ 1.77
CLN6-213ENST00000636212 NBPF4Q96M43 638 aa26.1■■□□□ 1.77
CLN6-213ENST00000636212 RGPD2P0DJD1 1756 aa26.09■■□□□ 1.77
CLN6-213ENST00000636212 TATP17735 454 aaPredicted RBP26.08■■□□□ 1.77
CLN6-213ENST00000636212 USHBP1Q8N6Y0 703 aa26.08■■□□□ 1.77
CLN6-213ENST00000636212 STK32BQ9NY57 414 aa26.08■■□□□ 1.77
CLN6-213ENST00000636212 EMILIN1Q9Y6C2 1016 aa26.08■■□□□ 1.77
CLN6-213ENST00000636212 SRCAPQ6ZRS2 3230 aa26.07■■□□□ 1.76
CLN6-213ENST00000636212 PROM2Q8N271 834 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms