RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 ZNF526Q8TF50 670 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-221ENST00000636012 FIBPO43427 364 aa18.91■□□□□ 0.62
CACNA1A-221ENST00000636012 TRIM22Q8IYM9 498 aa18.91■□□□□ 0.62
CACNA1A-221ENST00000636012 PRAM1Q96QH2 718 aa18.91■□□□□ 0.62
CACNA1A-221ENST00000636012 LETM1O95202 739 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-221ENST00000636012 PRKAR2BP31323 418 aa18.91■□□□□ 0.62
CACNA1A-221ENST00000636012 CCDC39Q9UFE4 941 aa18.91■□□□□ 0.62
CACNA1A-221ENST00000636012 NOB1Q9ULX3 412 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-221ENST00000636012 HDGFL1Q5TGJ6 251 aa18.9■□□□□ 0.62
CACNA1A-221ENST00000636012 GOLGA6L10A0A0M3HER8 536 aa18.9■□□□□ 0.62
CACNA1A-221ENST00000636012 GOLGA6L10A6NI86 522 aa18.9■□□□□ 0.62
CACNA1A-221ENST00000636012 SLC4A2P04920 1241 aa18.9■□□□□ 0.62
CACNA1A-221ENST00000636012 TDO2P48775 406 aa18.9■□□□□ 0.62
CACNA1A-221ENST00000636012 FAM177A1Q8N128 213 aaPredicted RBP18.9■□□□□ 0.62
CACNA1A-221ENST00000636012 FAM193AP78312 1265 aa18.89■□□□□ 0.61
CACNA1A-221ENST00000636012 CCDC181Q5TID7 509 aa18.89■□□□□ 0.61
CACNA1A-221ENST00000636012 PAXIP1Q6ZW49 1069 aaPredicted RBP18.89■□□□□ 0.61
CACNA1A-221ENST00000636012 PDCP20941 246 aa18.89■□□□□ 0.61
CACNA1A-221ENST00000636012 SSR1P43307 286 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-221ENST00000636012 PRPF40AO75400 957 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-221ENST00000636012 ME1P48163 572 aa18.88■□□□□ 0.61
CACNA1A-221ENST00000636012 CCDC85AQ96PX6 553 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-221ENST00000636012 SPG7Q9UQ90 795 aa18.88■□□□□ 0.61
CACNA1A-221ENST00000636012 ZNF644Q9H582 1327 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-221ENST00000636012 XPCQ01831 940 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-221ENST00000636012 TWISTNBQ3B726 338 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-221ENST00000636012 SULT6B1Q6IMI4 303 aa18.88■□□□□ 0.61
CACNA1A-221ENST00000636012 PPFIBP1Q86W92 1011 aa18.88■□□□□ 0.61
CACNA1A-221ENST00000636012 TSPY26PQ9H489 355 aa18.88■□□□□ 0.61
CACNA1A-221ENST00000636012 CT47B1P0C2W7 299 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-221ENST00000636012 ANKRD18AQ8IVF6 992 aa18.87■□□□□ 0.61
CACNA1A-221ENST00000636012 BTBD11A6QL63 1104 aa18.86■□□□□ 0.61
CACNA1A-221ENST00000636012 LRP2BPQ9P2M1 347 aa18.86■□□□□ 0.61
CACNA1A-221ENST00000636012 SERPINA10Q9UK55 444 aa18.86■□□□□ 0.61
CACNA1A-221ENST00000636012 GAPVD1Q14C86 1478 aa18.86■□□□□ 0.61
CACNA1A-221ENST00000636012 CDK19Q9BWU1 502 aa18.86■□□□□ 0.61
CACNA1A-221ENST00000636012 RRBP1Q9P2E9 1410 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-221ENST00000636012 CUX1P39880 1505 aa18.85■□□□□ 0.61
CACNA1A-221ENST00000636012 ADAMTS8Q9UP79 889 aa18.85■□□□□ 0.61
CACNA1A-221ENST00000636012 LUC7LQ9NQ29 371 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-221ENST00000636012 GBP2P32456 591 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-221ENST00000636012 KIF7Q2M1P5 1343 aa18.85■□□□□ 0.61
CACNA1A-221ENST00000636012 RAI14Q9P0K7 980 aa18.85■□□□□ 0.61
CACNA1A-221ENST00000636012 CYP46A1Q9Y6A2 500 aa18.85■□□□□ 0.61
CACNA1A-221ENST00000636012 DESP17661 470 aa18.85■□□□□ 0.61
CACNA1A-221ENST00000636012 JMYQ8N9B5 988 aa18.84■□□□□ 0.61
CACNA1A-221ENST00000636012 LRRCC1Q9C099 1032 aa18.84■□□□□ 0.61
CACNA1A-221ENST00000636012 MYOM3Q5VTT5 1437 aa18.84■□□□□ 0.61
CACNA1A-221ENST00000636012 ZNF530Q6P9A1 599 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-221ENST00000636012 TTLL12Q14166 644 aaPredicted RBP18.83■□□□□ 0.61
CACNA1A-221ENST00000636012 WDR78Q5VTH9 848 aa18.83■□□□□ 0.61
CACNA1A-221ENST00000636012 PIP4K2AP48426 406 aaPredicted RBP18.83■□□□□ 0.61
CACNA1A-221ENST00000636012 ZSCAN25Q6NSZ9 544 aa18.83■□□□□ 0.61
CACNA1A-221ENST00000636012 CWC15Q9P013 229 aaKnown RBP18.83■□□□□ 0.6
CACNA1A-221ENST00000636012 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 CCP110O43303 1012 aa18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 TRIM21P19474 475 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 EXOSC9Q06265 439 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 TCP11L2Q8N4U5 519 aa18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 UBAC1Q9BSL1 405 aa18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 AACSQ86V21 672 aa18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 TSR2Q969E8 191 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 TNMDQ9H2S6 317 aa18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 FYCO1Q9BQS8 1478 aa18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 TAF3Q5VWG9 929 aa18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 ABCF2Q9UG63 623 aa18.82■□□□□ 0.6
CACNA1A-221ENST00000636012 SCLT1Q96NL6 688 aa18.81■□□□□ 0.6
CACNA1A-221ENST00000636012 ANKRD1Q15327 319 aa18.81■□□□□ 0.6
CACNA1A-221ENST00000636012 NOL7Q9UMY1 257 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-221ENST00000636012 TMEM87AQ8NBN3 555 aa18.81■□□□□ 0.6
CACNA1A-221ENST00000636012 BMP2KQ9NSY1 1161 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-221ENST00000636012 DACH1Q9UI36 760 aa18.81■□□□□ 0.6
CACNA1A-221ENST00000636012 TRAK2O60296 914 aa18.81■□□□□ 0.6
CACNA1A-221ENST00000636012 PRDM11Q9NQV5 511 aa18.81■□□□□ 0.6
CACNA1A-221ENST00000636012 MCM2P49736 904 aa18.8■□□□□ 0.6
CACNA1A-221ENST00000636012 CBX1P83916 185 aa18.8■□□□□ 0.6
CACNA1A-221ENST00000636012 NFKBIBQ15653 356 aa18.8■□□□□ 0.6
CACNA1A-221ENST00000636012 TICAM2Q86XR7 235 aa18.8■□□□□ 0.6
CACNA1A-221ENST00000636012 CEP63Q96MT8 703 aa18.8■□□□□ 0.6
CACNA1A-221ENST00000636012 DDX23Q9BUQ8 820 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-221ENST00000636012 LRRFIP2Q9Y608 721 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-221ENST00000636012 CFAP70Q5T0N1 1121 aa18.79■□□□□ 0.6
CACNA1A-221ENST00000636012 CWC27Q6UX04 472 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-221ENST00000636012 LEKR1Q6ZMV7 388 aa18.79■□□□□ 0.6
CACNA1A-221ENST00000636012 IGHMBP2P38935 993 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-221ENST00000636012 ANKIB1Q9P2G1 1089 aa18.79■□□□□ 0.6
CACNA1A-221ENST00000636012 MPNDQ8N594 471 aa18.79■□□□□ 0.6
CACNA1A-221ENST00000636012 BCAR3O75815 825 aa18.79■□□□□ 0.6
CACNA1A-221ENST00000636012 ZPR1O75312 459 aa18.79■□□□□ 0.6
CACNA1A-221ENST00000636012 TMOD2Q9NZR1 351 aa18.79■□□□□ 0.6
CACNA1A-221ENST00000636012 THEMISQ8N1K5 641 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-221ENST00000636012 IDH1O75874 414 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-221ENST00000636012 CCT4P50991 539 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-221ENST00000636012 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
CACNA1A-221ENST00000636012 EZRP15311 586 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-221ENST00000636012 CEP57L1Q8IYX8 460 aa18.78■□□□□ 0.6
CACNA1A-221ENST00000636012 RRS1Q15050 365 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-221ENST00000636012 LARP1BQ659C4 914 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-221ENST00000636012 CABP1Q9NZU7 370 aa18.77■□□□□ 0.59
CACNA1A-221ENST00000636012 CRACR2BQ8N4Y2 399 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms