RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 USP54Q70EL1 1684 aa28.67■■■□□ 2.18
CIRBP-246ENST00000628979 KRT27Q7Z3Y8 459 aa28.65■■■□□ 2.18
CIRBP-246ENST00000628979 RGPD5Q99666 1765 aa28.65■■■□□ 2.18
CIRBP-246ENST00000628979 OVOS2A0A0J9YW53 1432 aa28.64■■■□□ 2.18
CIRBP-246ENST00000628979 OVOS2Q6IE36 1432 aa28.64■■■□□ 2.18
CIRBP-246ENST00000628979 TOM1L2Q6ZVM7 507 aa28.63■■■□□ 2.17
CIRBP-246ENST00000628979 GGNBP2Q9H3C7 697 aa28.63■■■□□ 2.17
CIRBP-246ENST00000628979 CSB-PGBD3P0DP91 1061 aa28.62■■■□□ 2.17
CIRBP-246ENST00000628979 FYB1O15117 783 aa28.61■■■□□ 2.17
CIRBP-246ENST00000628979 TCP11L2Q8N4U5 519 aa28.61■■■□□ 2.17
CIRBP-246ENST00000628979 CARD14Q9BXL6 1004 aa28.61■■■□□ 2.17
CIRBP-246ENST00000628979 LTN1O94822 1766 aa28.6■■■□□ 2.17
CIRBP-246ENST00000628979 CRB1P82279 1406 aa28.6■■■□□ 2.17
CIRBP-246ENST00000628979 C11orf95C9JLR9 678 aaPredicted RBP28.59■■■□□ 2.17
CIRBP-246ENST00000628979 NSD3Q9BZ95 1437 aa28.59■■■□□ 2.17
CIRBP-246ENST00000628979 FBLN1P23142 703 aa28.58■■■□□ 2.17
CIRBP-246ENST00000628979 BARGINQ6ZT62 677 aa28.57■■■□□ 2.16
CIRBP-246ENST00000628979 WDR17Q8IZU2 1322 aa28.57■■■□□ 2.16
CIRBP-246ENST00000628979 THSD7AQ9UPZ6 1657 aa28.57■■■□□ 2.16
CIRBP-246ENST00000628979 FAM182BQ5T319 152 aa28.56■■■□□ 2.16
CIRBP-246ENST00000628979 KIF20BQ96Q89 1820 aa28.56■■■□□ 2.16
CIRBP-246ENST00000628979 THRAP3Q9Y2W1 955 aaKnown RBP28.56■■■□□ 2.16
CIRBP-246ENST00000628979 PANK3Q9H999 370 aa28.52■■■□□ 2.16
CIRBP-246ENST00000628979 AMPHP49418 695 aa28.51■■■□□ 2.15
CIRBP-246ENST00000628979 ABCC6O95255 1503 aa28.51■■■□□ 2.15
CIRBP-246ENST00000628979 MAP3K19Q56UN5 1328 aa28.5■■■□□ 2.15
CIRBP-246ENST00000628979 PDE3BQ13370 1112 aa28.5■■■□□ 2.15
CIRBP-246ENST00000628979 ANKRD24Q8TF21 1146 aa28.5■■■□□ 2.15
CIRBP-246ENST00000628979 IP6K1Q92551 441 aa28.5■■■□□ 2.15
CIRBP-246ENST00000628979 LTV1Q96GA3 475 aaPredicted RBP28.5■■■□□ 2.15
CIRBP-246ENST00000628979 RRS1Q15050 365 aaKnown RBP28.49■■■□□ 2.15
CIRBP-246ENST00000628979 CARD10Q9BWT7 1032 aa28.49■■■□□ 2.15
CIRBP-246ENST00000628979 NLRP2Q9NX02 1062 aa28.49■■■□□ 2.15
CIRBP-246ENST00000628979 CCDC125Q86Z20 511 aa28.48■■■□□ 2.15
CIRBP-246ENST00000628979 CGNL1Q0VF96 1302 aa28.47■■■□□ 2.15
CIRBP-246ENST00000628979 ERBB3P21860 1342 aa28.46■■■□□ 2.15
CIRBP-246ENST00000628979 KIF7Q2M1P5 1343 aa28.46■■■□□ 2.15
CIRBP-246ENST00000628979 EP400Q96L91 3159 aa28.46■■■□□ 2.15
CIRBP-246ENST00000628979 SF3B2Q13435 895 aaKnown RBP28.46■■■□□ 2.15
CIRBP-246ENST00000628979 HOXC9P31274 260 aa28.45■■■□□ 2.14
CIRBP-246ENST00000628979 BLMP54132 1417 aaPredicted RBP28.44■■■□□ 2.14
CIRBP-246ENST00000628979 DDB1Q16531 1140 aa28.42■■■□□ 2.14
CIRBP-246ENST00000628979 PARP4Q9UKK3 1724 aaKnown RBP28.42■■■□□ 2.14
CIRBP-246ENST00000628979 CCDC7Q96M83 1385 aa28.41■■■□□ 2.14
CIRBP-246ENST00000628979 FAM196AQ6ZSG2 479 aa28.4■■■□□ 2.14
CIRBP-246ENST00000628979 CDCA7Q9BWT1 371 aaPredicted RBP28.4■■■□□ 2.14
CIRBP-246ENST00000628979 WNK3Q9BYP7 1800 aa28.4■■■□□ 2.14
CIRBP-246ENST00000628979 TNNT2P45379 298 aaPredicted RBP28.38■■■□□ 2.13
CIRBP-246ENST00000628979 DEFB132Q7Z7B7 95 aa28.38■■■□□ 2.13
CIRBP-246ENST00000628979 PPM1GO15355 546 aaPredicted RBP28.37■■■□□ 2.13
CIRBP-246ENST00000628979 RTL1A6NKG5 1358 aa28.37■■■□□ 2.13
CIRBP-246ENST00000628979 LRRC37A3O60309 1634 aa28.36■■■□□ 2.13
CIRBP-246ENST00000628979 KNSTRNQ9Y448 316 aa28.36■■■□□ 2.13
CIRBP-246ENST00000628979 EMILIN1Q9Y6C2 1016 aa28.36■■■□□ 2.13
CIRBP-246ENST00000628979 EXOC5O00471 708 aa28.35■■■□□ 2.13
CIRBP-246ENST00000628979 TRIM37O94972 964 aa28.35■■■□□ 2.13
CIRBP-246ENST00000628979 HSP90AB2PQ58FF8 381 aa28.34■■■□□ 2.13
CIRBP-246ENST00000628979 DISP2A7MBM2 1401 aa28.34■■■□□ 2.13
CIRBP-246ENST00000628979 IL2RBP14784 551 aa28.33■■■□□ 2.13
CIRBP-246ENST00000628979 PEAK1Q9H792 1746 aa28.32■■■□□ 2.12
CIRBP-246ENST00000628979 ANKRD26Q9UPS8 1709 aa28.32■■■□□ 2.12
CIRBP-246ENST00000628979 RGPD2P0DJD1 1756 aa28.32■■■□□ 2.12
CIRBP-246ENST00000628979 RGPD1P0DJD0 1748 aa28.32■■■□□ 2.12
CIRBP-246ENST00000628979 BAG6P46379 1132 aa28.31■■■□□ 2.12
CIRBP-246ENST00000628979 FLT4P35916 1363 aa28.31■■■□□ 2.12
CIRBP-246ENST00000628979 FAM208AQ9UK61 1670 aaKnown RBP28.31■■■□□ 2.12
CIRBP-246ENST00000628979 MAP2P11137 1827 aaKnown RBP28.31■■■□□ 2.12
CIRBP-246ENST00000628979 WASHC2AQ641Q2 1341 aa28.3■■■□□ 2.12
CIRBP-246ENST00000628979 MARCH10Q8NA82 808 aaPredicted RBP28.3■■■□□ 2.12
CIRBP-246ENST00000628979 SMG6Q86US8 1419 aaKnown RBP28.29■■■□□ 2.12
CIRBP-246ENST00000628979 MORC1Q86VD1 984 aa28.29■■■□□ 2.12
CIRBP-246ENST00000628979 OVOS2A0A0G2JMS6 1433 aa28.28■■■□□ 2.12
CIRBP-246ENST00000628979 INSRP06213 1382 aa28.28■■■□□ 2.12
CIRBP-246ENST00000628979 USHBP1Q8N6Y0 703 aa28.28■■■□□ 2.12
CIRBP-246ENST00000628979 EN1Q05925 392 aaPredicted RBP28.27■■■□□ 2.12
CIRBP-246ENST00000628979 NBPF6Q5VWK0 638 aa28.27■■■□□ 2.12
CIRBP-246ENST00000628979 NBPF4Q96M43 638 aa28.27■■■□□ 2.12
CIRBP-246ENST00000628979 POLKQ9UBT6 870 aa28.27■■■□□ 2.12
CIRBP-246ENST00000628979 NSD2O96028 1365 aa28.26■■■□□ 2.12
CIRBP-246ENST00000628979 KIF24Q5T7B8 1368 aa28.26■■■□□ 2.12
CIRBP-246ENST00000628979 APBA3O96018 575 aa28.26■■■□□ 2.11
CIRBP-246ENST00000628979 TNS1Q9HBL0 1735 aaKnown RBP28.25■■■□□ 2.11
CIRBP-246ENST00000628979 TNS2Q63HR2 1409 aa28.24■■■□□ 2.11
CIRBP-246ENST00000628979 CNGB1Q14028 1251 aaPredicted RBP28.22■■■□□ 2.11
CIRBP-246ENST00000628979 AMER1Q5JTC6 1135 aaPredicted RBP28.21■■■□□ 2.11
CIRBP-246ENST00000628979 DDX54Q8TDD1 881 aaKnown RBP28.2■■■□□ 2.1
CIRBP-246ENST00000628979 PER1O15534 1290 aaPredicted RBP28.19■■■□□ 2.1
CIRBP-246ENST00000628979 EZH2Q15910 746 aaKnown RBP28.19■■■□□ 2.1
CIRBP-246ENST00000628979 CC2D1BQ5T0F9 858 aaKnown RBP28.19■■■□□ 2.1
CIRBP-246ENST00000628979 SBF2Q86WG5 1849 aa28.19■■■□□ 2.1
CIRBP-246ENST00000628979 RAPGEF4Q8WZA2 1011 aa28.17■■■□□ 2.1
CIRBP-246ENST00000628979 PTF1AQ7RTS3 328 aa28.16■■■□□ 2.1
CIRBP-246ENST00000628979 ACSBG1Q96GR2 724 aa28.16■■■□□ 2.1
CIRBP-246ENST00000628979 MEGF6O75095 1541 aa28.15■■■□□ 2.1
CIRBP-246ENST00000628979 TATP17735 454 aaPredicted RBP28.15■■■□□ 2.1
CIRBP-246ENST00000628979 ZCRB1Q8TBF4 217 aaKnown RBP28.14■■■□□ 2.1
CIRBP-246ENST00000628979 CAMKK2Q96RR4 588 aa28.14■■■□□ 2.1
CIRBP-246ENST00000628979 BCL11BQ9C0K0 894 aaPredicted RBP28.14■■■□□ 2.1
CIRBP-246ENST00000628979 EIF4A2Q14240 407 aaKnown RBP28.13■■■□□ 2.09
CIRBP-246ENST00000628979 KAT6BQ8WYB5 2073 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms