RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 COL5A2P05997 1499 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-215ENST00000628867 SOX12O15370 315 aa11.08□□□□□ -0.64
SPTAN1-215ENST00000628867 WDR17Q8IZU2 1322 aa11.08□□□□□ -0.64
SPTAN1-215ENST00000628867 AATKQ6ZMQ8 1374 aa11.07□□□□□ -0.64
SPTAN1-215ENST00000628867 KCNH5Q8NCM2 988 aa11.07□□□□□ -0.64
SPTAN1-215ENST00000628867 ACSBG1Q96GR2 724 aa11.07□□□□□ -0.64
SPTAN1-215ENST00000628867 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
SPTAN1-215ENST00000628867 GRIN3BO60391 1043 aa11.06□□□□□ -0.64
SPTAN1-215ENST00000628867 CARD10Q9BWT7 1032 aa11.06□□□□□ -0.64
SPTAN1-215ENST00000628867 CABP1Q9NZU7 370 aa11.06□□□□□ -0.64
SPTAN1-215ENST00000628867 PHRF1Q9P1Y6 1649 aaKnown RBP11.06□□□□□ -0.64
SPTAN1-215ENST00000628867 ADGRB1O14514 1584 aa11.05□□□□□ -0.64
SPTAN1-215ENST00000628867 MSH5O43196 834 aa11.05□□□□□ -0.64
SPTAN1-215ENST00000628867 ITSN1Q15811 1721 aa11.05□□□□□ -0.64
SPTAN1-215ENST00000628867 PPIP5K1Q6PFW1 1433 aa11.05□□□□□ -0.64
SPTAN1-215ENST00000628867 SLC16A10Q8TF71 515 aa11.05□□□□□ -0.64
SPTAN1-215ENST00000628867 AXIN2Q9Y2T1 843 aa11.05□□□□□ -0.64
SPTAN1-215ENST00000628867 CRYBG1Q9Y4K1 1723 aa11.05□□□□□ -0.64
SPTAN1-215ENST00000628867 BRD4O60885 1362 aaPredicted RBP11.04□□□□□ -0.64
SPTAN1-215ENST00000628867 SGIP1Q9BQI5 828 aa11.04□□□□□ -0.64
SPTAN1-215ENST00000628867 TFCP2L1Q9NZI6 479 aa11.04□□□□□ -0.64
SPTAN1-215ENST00000628867 MYOM1P52179 1685 aa11.04□□□□□ -0.64
SPTAN1-215ENST00000628867 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
SPTAN1-215ENST00000628867 PARP4Q9UKK3 1724 aaKnown RBP11.03□□□□□ -0.64
SPTAN1-215ENST00000628867 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.65
SPTAN1-215ENST00000628867 GPBP1L1Q9HC44 474 aaPredicted RBP11.02□□□□□ -0.65
SPTAN1-215ENST00000628867 CHD4Q14839 1912 aa11.01□□□□□ -0.65
SPTAN1-215ENST00000628867 BCL9O00512 1426 aa11.01□□□□□ -0.65
SPTAN1-215ENST00000628867 ARHGEF25Q86VW2 580 aa11.01□□□□□ -0.65
SPTAN1-215ENST00000628867 CENPJQ9HC77 1338 aaPredicted RBP11.01□□□□□ -0.65
SPTAN1-215ENST00000628867 CCDC7Q96M83 1385 aa11.01□□□□□ -0.65
SPTAN1-215ENST00000628867 MAP3K5Q99683 1374 aa11.01□□□□□ -0.65
SPTAN1-215ENST00000628867 CASZ1Q86V15 1759 aa11□□□□□ -0.65
SPTAN1-215ENST00000628867 SYTL4Q96C24 671 aaPredicted RBP11□□□□□ -0.65
SPTAN1-215ENST00000628867 LMO7Q8WWI1 1683 aa11□□□□□ -0.65
SPTAN1-215ENST00000628867 RGPD3A6NKT7 1758 aaPredicted RBP11□□□□□ -0.65
SPTAN1-215ENST00000628867 RGPD4Q7Z3J3 1758 aa11□□□□□ -0.65
SPTAN1-215ENST00000628867 IL2RBP14784 551 aa10.99□□□□□ -0.65
SPTAN1-215ENST00000628867 SLC27A3Q5K4L6 730 aa10.99□□□□□ -0.65
SPTAN1-215ENST00000628867 USP6P35125 1406 aa10.99□□□□□ -0.65
SPTAN1-215ENST00000628867 ZNF827Q17R98 1081 aa10.98□□□□□ -0.65
SPTAN1-215ENST00000628867 NBPF1Q3BBV0 1214 aa10.98□□□□□ -0.65
SPTAN1-215ENST00000628867 DDX54Q8TDD1 881 aaKnown RBP10.98□□□□□ -0.65
SPTAN1-215ENST00000628867 ZNF526Q8TF50 670 aaPredicted RBP10.98□□□□□ -0.65
SPTAN1-215ENST00000628867 EVC2Q86UK5 1308 aa10.98□□□□□ -0.65
SPTAN1-215ENST00000628867 PEAK1Q9H792 1746 aa10.98□□□□□ -0.65
SPTAN1-215ENST00000628867 HSPA6P17066 643 aa10.97□□□□□ -0.65
SPTAN1-215ENST00000628867 HMGB2P26583 209 aaKnown RBP10.97□□□□□ -0.65
SPTAN1-215ENST00000628867 NLGN2Q8NFZ4 835 aa10.97□□□□□ -0.65
SPTAN1-215ENST00000628867 TTC21BQ7Z4L5 1316 aa10.97□□□□□ -0.65
SPTAN1-215ENST00000628867 LRRC37A3O60309 1634 aa10.97□□□□□ -0.65
SPTAN1-215ENST00000628867 SBF2Q86WG5 1849 aa10.97□□□□□ -0.65
SPTAN1-215ENST00000628867 CPSF1Q10570 1443 aaKnown RBP10.96□□□□□ -0.65
SPTAN1-215ENST00000628867 RAB3GAP2Q9H2M9 1393 aa10.96□□□□□ -0.65
SPTAN1-215ENST00000628867 LRRC4BQ9NT99 713 aa10.96□□□□□ -0.65
SPTAN1-215ENST00000628867 TTC21AQ8NDW8 1320 aa10.95□□□□□ -0.66
SPTAN1-215ENST00000628867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.95□□□□□ -0.66
SPTAN1-215ENST00000628867 AKT1S1Q96B36 256 aa10.95□□□□□ -0.66
SPTAN1-215ENST00000628867 KAT6BQ8WYB5 2073 aa10.94□□□□□ -0.66
SPTAN1-215ENST00000628867 YBX3P16989 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
SPTAN1-215ENST00000628867 ARHGEF28Q8N1W1 1705 aaKnown RBP10.94□□□□□ -0.66
SPTAN1-215ENST00000628867 TNS2Q63HR2 1409 aa10.93□□□□□ -0.66
SPTAN1-215ENST00000628867 AKAP12Q02952 1782 aa10.93□□□□□ -0.66
SPTAN1-215ENST00000628867 PNPLA7Q6ZV29 1317 aa10.93□□□□□ -0.66
SPTAN1-215ENST00000628867 PRIM1P49642 420 aaKnown RBP10.93□□□□□ -0.66
SPTAN1-215ENST00000628867 KCNQ4P56696 695 aa10.93□□□□□ -0.66
SPTAN1-215ENST00000628867 ANKRD24Q8TF21 1146 aa10.93□□□□□ -0.66
SPTAN1-215ENST00000628867 CCNL1Q9UK58 526 aaPredicted RBP10.93□□□□□ -0.66
SPTAN1-215ENST00000628867 ATP10DQ9P241 1426 aa10.92□□□□□ -0.66
SPTAN1-215ENST00000628867 LTV1Q96GA3 475 aaPredicted RBP10.92□□□□□ -0.66
SPTAN1-215ENST00000628867 SLIT3O75094 1523 aa10.92□□□□□ -0.66
SPTAN1-215ENST00000628867 TOPAZ1Q8N9V7 1692 aa10.92□□□□□ -0.66
SPTAN1-215ENST00000628867 KTN1Q86UP2 1357 aaKnown RBP10.91□□□□□ -0.66
SPTAN1-215ENST00000628867 MSL1Q68DK7 614 aa10.91□□□□□ -0.66
SPTAN1-215ENST00000628867 ERBB3P21860 1342 aa10.9□□□□□ -0.66
SPTAN1-215ENST00000628867 FLAD1Q8NFF5 587 aa10.9□□□□□ -0.66
SPTAN1-215ENST00000628867 TMC1Q8TDI8 760 aa10.9□□□□□ -0.66
SPTAN1-215ENST00000628867 CD2APQ9Y5K6 639 aa10.9□□□□□ -0.66
SPTAN1-215ENST00000628867 APLP1P51693 650 aa10.89□□□□□ -0.67
SPTAN1-215ENST00000628867 HDGFL2Q7Z4V5 671 aaPredicted RBP10.89□□□□□ -0.67
SPTAN1-215ENST00000628867 COL23A1Q86Y22 540 aaPredicted RBP10.89□□□□□ -0.67
SPTAN1-215ENST00000628867 WWC3Q9ULE0 1092 aa10.88□□□□□ -0.67
SPTAN1-215ENST00000628867 UTRNP46939 3433 aa10.88□□□□□ -0.67
SPTAN1-215ENST00000628867 USP47Q96K76 1375 aa10.88□□□□□ -0.67
SPTAN1-215ENST00000628867 ZCRB1Q8TBF4 217 aaKnown RBP10.87□□□□□ -0.67
SPTAN1-215ENST00000628867 COL18A1P39060 1754 aa10.87□□□□□ -0.67
SPTAN1-215ENST00000628867 NHSQ6T4R5 1651 aa10.86□□□□□ -0.67
SPTAN1-215ENST00000628867 NME9Q86XW9 330 aa10.86□□□□□ -0.67
SPTAN1-215ENST00000628867 C16orf71Q8IYS4 520 aaPredicted RBP10.86□□□□□ -0.67
SPTAN1-215ENST00000628867 ABCC6O95255 1503 aa10.85□□□□□ -0.67
SPTAN1-215ENST00000628867 CAPN15O75808 1086 aa10.85□□□□□ -0.67
SPTAN1-215ENST00000628867 AMPHP49418 695 aa10.85□□□□□ -0.67
SPTAN1-215ENST00000628867 SHANK3Q9BYB0 1731 aa10.84□□□□□ -0.67
SPTAN1-215ENST00000628867 IP6K1Q92551 441 aa10.84□□□□□ -0.67
SPTAN1-215ENST00000628867 AK7Q96M32 723 aa10.84□□□□□ -0.67
SPTAN1-215ENST00000628867 TERF2IPQ9NYB0 399 aa10.84□□□□□ -0.67
SPTAN1-215ENST00000628867 ANKRD36BQ8N2N9 1353 aa10.84□□□□□ -0.67
SPTAN1-215ENST00000628867 PIK3C2AO00443 1686 aa10.84□□□□□ -0.67
SPTAN1-215ENST00000628867 RGPD5Q99666 1765 aa10.84□□□□□ -0.67
SPTAN1-215ENST00000628867 BTAF1O14981 1849 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms