RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 FYB1O15117 783 aa25.77■■□□□ 1.72
PBX1-222ENST00000627490 ATF3P18847 181 aa25.76■■□□□ 1.71
PBX1-222ENST00000627490 PHF8Q9UPP1 1060 aa25.76■■□□□ 1.71
PBX1-222ENST00000627490 NEUROD2Q15784 382 aa25.75■■□□□ 1.71
PBX1-222ENST00000627490 RRP7AQ9Y3A4 280 aaKnown RBP25.75■■□□□ 1.71
PBX1-222ENST00000627490 LTBP4Q8N2S1 1624 aa25.75■■□□□ 1.71
PBX1-222ENST00000627490 IL16Q14005 1332 aa25.74■■□□□ 1.71
PBX1-222ENST00000627490 TTC21AQ8NDW8 1320 aa25.74■■□□□ 1.71
PBX1-222ENST00000627490 U2AF1L5P0DN76 240 aaPredicted RBP25.74■■□□□ 1.71
PBX1-222ENST00000627490 U2AF1Q01081 240 aaKnown RBP eCLIP25.74■■□□□ 1.71
PBX1-222ENST00000627490 NGDNQ8NEJ9 315 aaKnown RBP25.74■■□□□ 1.71
PBX1-222ENST00000627490 FRAT1Q92837 279 aaPredicted RBP25.74■■□□□ 1.71
PBX1-222ENST00000627490 RWDD1Q9H446 243 aaPredicted RBP25.74■■□□□ 1.71
PBX1-222ENST00000627490 COL3A1P02461 1466 aaPredicted RBP25.73■■□□□ 1.71
PBX1-222ENST00000627490 TTC21BQ7Z4L5 1316 aa25.73■■□□□ 1.71
PBX1-222ENST00000627490 USP54Q70EL1 1684 aa25.73■■□□□ 1.71
PBX1-222ENST00000627490 PNNQ9H307 717 aaKnown RBP25.72■■□□□ 1.71
PBX1-222ENST00000627490 NFKBIBQ15653 356 aa25.71■■□□□ 1.71
PBX1-222ENST00000627490 ESCO1Q5FWF5 840 aa25.69■■□□□ 1.7
PBX1-222ENST00000627490 ZKSCAN2Q63HK3 967 aa25.69■■□□□ 1.7
PBX1-222ENST00000627490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.69■■□□□ 1.7
PBX1-222ENST00000627490 GGNBP2Q9H3C7 697 aa25.69■■□□□ 1.7
PBX1-222ENST00000627490 PLEKHF1Q96S99 279 aa25.67■■□□□ 1.7
PBX1-222ENST00000627490 OVOS2A0A0J9YW53 1432 aa25.67■■□□□ 1.7
PBX1-222ENST00000627490 OVOS2Q6IE36 1432 aa25.67■■□□□ 1.7
PBX1-222ENST00000627490 PIK3C2AO00443 1686 aa25.67■■□□□ 1.7
PBX1-222ENST00000627490 BECN1Q14457 450 aa25.67■■□□□ 1.7
PBX1-222ENST00000627490 MVPQ14764 893 aaKnown RBP25.67■■□□□ 1.7
PBX1-222ENST00000627490 USP19O94966 1318 aa25.66■■□□□ 1.7
PBX1-222ENST00000627490 USP31Q70CQ4 1352 aa25.66■■□□□ 1.7
PBX1-222ENST00000627490 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
PBX1-222ENST00000627490 RLBP1P12271 317 aa25.65■■□□□ 1.7
PBX1-222ENST00000627490 ORAI2Q96SN7 254 aa25.65■■□□□ 1.7
PBX1-222ENST00000627490 PCDHB15Q9Y5E8 787 aa25.65■■□□□ 1.7
PBX1-222ENST00000627490 TMPOP42166 694 aaKnown RBP25.64■■□□□ 1.7
PBX1-222ENST00000627490 NME9Q86XW9 330 aa25.64■■□□□ 1.7
PBX1-222ENST00000627490 TRPM3Q9HCF6 1732 aaPredicted RBP25.64■■□□□ 1.69
PBX1-222ENST00000627490 PNPLA6Q8IY17 1366 aa25.64■■□□□ 1.69
PBX1-222ENST00000627490 DZIP1LQ8IYY4 767 aaKnown RBP25.64■■□□□ 1.69
PBX1-222ENST00000627490 AATKQ6ZMQ8 1374 aa25.63■■□□□ 1.69
PBX1-222ENST00000627490 SLC4A3P48751 1232 aa25.62■■□□□ 1.69
PBX1-222ENST00000627490 COG3Q96JB2 828 aa25.62■■□□□ 1.69
PBX1-222ENST00000627490 UPF2Q9HAU5 1272 aaKnown RBP25.62■■□□□ 1.69
PBX1-222ENST00000627490 GSE1Q14687 1217 aa25.61■■□□□ 1.69
PBX1-222ENST00000627490 MARF1Q9Y4F3 1742 aaKnown RBP25.61■■□□□ 1.69
PBX1-222ENST00000627490 PDZRN3Q9UPQ7 1066 aa25.61■■□□□ 1.69
PBX1-222ENST00000627490 FTSJ3Q8IY81 847 aaKnown RBP25.59■■□□□ 1.69
PBX1-222ENST00000627490 TRIM35Q9UPQ4 493 aa25.59■■□□□ 1.69
PBX1-222ENST00000627490 PSME1Q06323 249 aa25.58■■□□□ 1.69
PBX1-222ENST00000627490 HDAC1Q13547 482 aaPredicted RBP25.58■■□□□ 1.69
PBX1-222ENST00000627490 MAP2P11137 1827 aaKnown RBP25.57■■□□□ 1.68
PBX1-222ENST00000627490 DDX19BQ9UMR2 479 aa25.57■■□□□ 1.68
PBX1-222ENST00000627490 U2SURPO15042 1029 aaKnown RBP25.56■■□□□ 1.68
PBX1-222ENST00000627490 DIAPH1O60610 1272 aaKnown RBP25.56■■□□□ 1.68
PBX1-222ENST00000627490 ZNF428Q96B54 188 aa25.56■■□□□ 1.68
PBX1-222ENST00000627490 SLAIN2Q9P270 581 aa25.56■■□□□ 1.68
PBX1-222ENST00000627490 NPHP3Q7Z494 1330 aa25.55■■□□□ 1.68
PBX1-222ENST00000627490 ALS2Q96Q42 1657 aa25.55■■□□□ 1.68
PBX1-222ENST00000627490 FOXO3O43524 673 aa25.55■■□□□ 1.68
PBX1-222ENST00000627490 BCL2L13Q9BXK5 485 aa25.55■■□□□ 1.68
PBX1-222ENST00000627490 SMC4Q9NTJ3 1288 aa25.55■■□□□ 1.68
PBX1-222ENST00000627490 ZRANB1Q9UGI0 708 aa25.55■■□□□ 1.68
PBX1-222ENST00000627490 IPO8O15397 1037 aaKnown RBP25.54■■□□□ 1.68
PBX1-222ENST00000627490 EXOSC9Q06265 439 aaKnown RBP25.54■■□□□ 1.68
PBX1-222ENST00000627490 TNNQ9UQP3 1299 aa25.54■■□□□ 1.68
PBX1-222ENST00000627490 KIF16BQ96L93 1317 aa25.54■■□□□ 1.68
PBX1-222ENST00000627490 FCHSD2O94868 740 aa25.54■■□□□ 1.68
PBX1-222ENST00000627490 SBNO1A3KN83 1393 aa25.53■■□□□ 1.68
PBX1-222ENST00000627490 ALDH1L2Q3SY69 923 aa25.53■■□□□ 1.68
PBX1-222ENST00000627490 ATF7IPQ6VMQ6 1270 aa25.53■■□□□ 1.68
PBX1-222ENST00000627490 TBC1D32Q96NH3 1257 aa25.53■■□□□ 1.68
PBX1-222ENST00000627490 PXDNQ92626 1479 aa25.53■■□□□ 1.68
PBX1-222ENST00000627490 BRINP3Q76B58 766 aa25.52■■□□□ 1.68
PBX1-222ENST00000627490 SEC24BO95487 1268 aa25.51■■□□□ 1.67
PBX1-222ENST00000627490 KRT28Q7Z3Y7 464 aa25.51■■□□□ 1.67
PBX1-222ENST00000627490 NHSL1Q5SYE7 1610 aa25.51■■□□□ 1.67
PBX1-222ENST00000627490 CDK12Q9NYV4 1490 aaPredicted RBP25.51■■□□□ 1.67
PBX1-222ENST00000627490 BRPF1P55201 1214 aaPredicted RBP25.51■■□□□ 1.67
PBX1-222ENST00000627490 RIPK4P57078 832 aa25.5■■□□□ 1.67
PBX1-222ENST00000627490 ABTB2Q8N961 1025 aa25.5■■□□□ 1.67
PBX1-222ENST00000627490 SSH1Q8WYL5 1049 aa25.5■■□□□ 1.67
PBX1-222ENST00000627490 TSR2Q969E8 191 aaKnown RBP25.5■■□□□ 1.67
PBX1-222ENST00000627490 TRIM27P14373 513 aa25.49■■□□□ 1.67
PBX1-222ENST00000627490 POLKQ9UBT6 870 aa25.49■■□□□ 1.67
PBX1-222ENST00000627490 NLRP6P59044 892 aa25.48■■□□□ 1.67
PBX1-222ENST00000627490 CALD1Q05682 793 aaKnown RBP25.48■■□□□ 1.67
PBX1-222ENST00000627490 SLIT3O75094 1523 aa25.48■■□□□ 1.67
PBX1-222ENST00000627490 CHMP4BQ9H444 224 aaKnown RBP25.47■■□□□ 1.67
PBX1-222ENST00000627490 SMC5Q8IY18 1101 aa25.46■■□□□ 1.67
PBX1-222ENST00000627490 TNS3Q68CZ2 1445 aa25.45■■□□□ 1.66
PBX1-222ENST00000627490 KIF24Q5T7B8 1368 aa25.45■■□□□ 1.66
PBX1-222ENST00000627490 NFAT5O94916 1531 aa25.44■■□□□ 1.66
PBX1-222ENST00000627490 SOS2Q07890 1332 aaPredicted RBP25.44■■□□□ 1.66
PBX1-222ENST00000627490 FRAT2O75474 233 aaPredicted RBP25.44■■□□□ 1.66
PBX1-222ENST00000627490 NOB1Q9ULX3 412 aaKnown RBP25.44■■□□□ 1.66
PBX1-222ENST00000627490 PHRF1Q9P1Y6 1649 aaKnown RBP25.44■■□□□ 1.66
PBX1-222ENST00000627490 MED1Q15648 1581 aaPredicted RBP25.43■■□□□ 1.66
PBX1-222ENST00000627490 ITPRIPQ8IWB1 547 aa25.42■■□□□ 1.66
PBX1-222ENST00000627490 ZBTB40Q9NUA8 1239 aa25.42■■□□□ 1.66
PBX1-222ENST00000627490 PEAK1Q9H792 1746 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms