RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 TTC21AQ8NDW8 1320 aa23.68■■□□□ 1.38
TRIM29-221ENST00000627238 SBNO2Q9Y2G9 1366 aa23.67■■□□□ 1.38
TRIM29-221ENST00000627238 TTC21BQ7Z4L5 1316 aa23.67■■□□□ 1.38
TRIM29-221ENST00000627238 ARHGEF25Q86VW2 580 aa23.67■■□□□ 1.38
TRIM29-221ENST00000627238 KCNH5Q8NCM2 988 aa23.67■■□□□ 1.38
TRIM29-221ENST00000627238 NBPF14Q5TI25 921 aa23.66■■□□□ 1.38
TRIM29-221ENST00000627238 NFAT5O94916 1531 aa23.65■■□□□ 1.38
TRIM29-221ENST00000627238 USP54Q70EL1 1684 aa23.65■■□□□ 1.38
TRIM29-221ENST00000627238 PLSCR1O15162 318 aa23.65■■□□□ 1.38
TRIM29-221ENST00000627238 SIN3AQ96ST3 1273 aa23.65■■□□□ 1.38
TRIM29-221ENST00000627238 CDCA7Q9BWT1 371 aaPredicted RBP23.65■■□□□ 1.38
TRIM29-221ENST00000627238 AXIN2Q9Y2T1 843 aa23.65■■□□□ 1.38
TRIM29-221ENST00000627238 MON2Q7Z3U7 1717 aa23.64■■□□□ 1.38
TRIM29-221ENST00000627238 DDB1Q16531 1140 aa23.64■■□□□ 1.37
TRIM29-221ENST00000627238 TOM1L2Q6ZVM7 507 aa23.63■■□□□ 1.37
TRIM29-221ENST00000627238 RGPD5Q99666 1765 aa23.63■■□□□ 1.37
TRIM29-221ENST00000627238 CARD10Q9BWT7 1032 aa23.61■■□□□ 1.37
TRIM29-221ENST00000627238 BCL11BQ9C0K0 894 aaPredicted RBP23.6■■□□□ 1.37
TRIM29-221ENST00000627238 ZBTB7CA1YPR0 619 aa23.59■■□□□ 1.37
TRIM29-221ENST00000627238 USP31Q70CQ4 1352 aa23.59■■□□□ 1.37
TRIM29-221ENST00000627238 KTN1Q86UP2 1357 aaKnown RBP23.59■■□□□ 1.37
TRIM29-221ENST00000627238 CCDC7Q96M83 1385 aa23.57■■□□□ 1.36
TRIM29-221ENST00000627238 MARCH10Q8NA82 808 aaPredicted RBP23.57■■□□□ 1.36
TRIM29-221ENST00000627238 CD163L1Q9NR16 1453 aa23.56■■□□□ 1.36
TRIM29-221ENST00000627238 NEUROD1Q13562 356 aa23.55■■□□□ 1.36
TRIM29-221ENST00000627238 CASZ1Q86V15 1759 aa23.55■■□□□ 1.36
TRIM29-221ENST00000627238 SPON1Q9HCB6 807 aa23.54■■□□□ 1.36
TRIM29-221ENST00000627238 TNS2Q63HR2 1409 aa23.53■■□□□ 1.36
TRIM29-221ENST00000627238 KCNQ2O43526 872 aa23.52■■□□□ 1.36
TRIM29-221ENST00000627238 PTF1AQ7RTS3 328 aa23.51■■□□□ 1.35
TRIM29-221ENST00000627238 NINLQ9Y2I6 1382 aa23.51■■□□□ 1.35
TRIM29-221ENST00000627238 PROM2Q8N271 834 aa23.5■■□□□ 1.35
TRIM29-221ENST00000627238 PUS7Q96PZ0 661 aaKnown RBP23.5■■□□□ 1.35
TRIM29-221ENST00000627238 ANO8Q9HCE9 1232 aaPredicted RBP23.5■■□□□ 1.35
TRIM29-221ENST00000627238 EXOC5O00471 708 aa23.49■■□□□ 1.35
TRIM29-221ENST00000627238 CSB-PGBD3P0DP91 1061 aa23.49■■□□□ 1.35
TRIM29-221ENST00000627238 LTN1O94822 1766 aa23.49■■□□□ 1.35
TRIM29-221ENST00000627238 CARD11Q9BXL7 1154 aa23.48■■□□□ 1.35
TRIM29-221ENST00000627238 ERBB3P21860 1342 aa23.48■■□□□ 1.35
TRIM29-221ENST00000627238 EDC4Q6P2E9 1401 aaKnown RBP23.48■■□□□ 1.35
TRIM29-221ENST00000627238 NHSQ6T4R5 1651 aa23.48■■□□□ 1.35
TRIM29-221ENST00000627238 SOX12O15370 315 aa23.47■■□□□ 1.35
TRIM29-221ENST00000627238 NME9Q86XW9 330 aa23.44■■□□□ 1.34
TRIM29-221ENST00000627238 HDGFL2Q7Z4V5 671 aaPredicted RBP23.43■■□□□ 1.34
TRIM29-221ENST00000627238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.43■■□□□ 1.34
TRIM29-221ENST00000627238 PPP1R1BQ9UD71 204 aaPredicted RBP23.43■■□□□ 1.34
TRIM29-221ENST00000627238 TXNRD1Q16881 649 aa23.42■■□□□ 1.34
TRIM29-221ENST00000627238 A0A1W2PP64 1363 aa23.41■■□□□ 1.34
TRIM29-221ENST00000627238 SLC12A5Q9H2X9 1139 aa23.41■■□□□ 1.34
TRIM29-221ENST00000627238 TERF2IPQ9NYB0 399 aa23.4■■□□□ 1.34
TRIM29-221ENST00000627238 FAM208AQ9UK61 1670 aaKnown RBP23.4■■□□□ 1.34
TRIM29-221ENST00000627238 PAPPAQ13219 1627 aa23.4■■□□□ 1.34
TRIM29-221ENST00000627238 IL2RBP14784 551 aa23.39■■□□□ 1.33
TRIM29-221ENST00000627238 SLC15A2Q16348 729 aa23.38■■□□□ 1.33
TRIM29-221ENST00000627238 TMC1Q8TDI8 760 aa23.38■■□□□ 1.33
TRIM29-221ENST00000627238 UTRNP46939 3433 aa23.38■■□□□ 1.33
TRIM29-221ENST00000627238 TONSLQ96HA7 1378 aa23.38■■□□□ 1.33
TRIM29-221ENST00000627238 PTGER2P43116 358 aa23.37■■□□□ 1.33
TRIM29-221ENST00000627238 ANKRD24Q8TF21 1146 aa23.37■■□□□ 1.33
TRIM29-221ENST00000627238 PDGFDQ9GZP0 370 aaPredicted RBP23.37■■□□□ 1.33
TRIM29-221ENST00000627238 NLRP2Q9NX02 1062 aa23.37■■□□□ 1.33
TRIM29-221ENST00000627238 STK32BQ9NY57 414 aa23.37■■□□□ 1.33
TRIM29-221ENST00000627238 MYOM1P52179 1685 aa23.36■■□□□ 1.33
TRIM29-221ENST00000627238 BTAF1O14981 1849 aa23.36■■□□□ 1.33
TRIM29-221ENST00000627238 SLC24A1O60721 1099 aa23.35■■□□□ 1.33
TRIM29-221ENST00000627238 TESK2Q96S53 571 aa23.35■■□□□ 1.33
TRIM29-221ENST00000627238 YY1P25490 414 aa23.34■■□□□ 1.33
TRIM29-221ENST00000627238 IP6K1Q92551 441 aa23.34■■□□□ 1.33
TRIM29-221ENST00000627238 DCAF8L1A6NGE4 600 aa23.32■■□□□ 1.32
TRIM29-221ENST00000627238 ZBTB7AO95365 584 aa23.31■■□□□ 1.32
TRIM29-221ENST00000627238 SGIP1Q9BQI5 828 aa23.31■■□□□ 1.32
TRIM29-221ENST00000627238 MTFR1LQ9H019 292 aa23.31■■□□□ 1.32
TRIM29-221ENST00000627238 ACSBG1Q96GR2 724 aa23.29■■□□□ 1.32
TRIM29-221ENST00000627238 QSER1Q2KHR3 1735 aa23.28■■□□□ 1.32
TRIM29-221ENST00000627238 ST20-MTHFSA0A0A6YYL1 179 aa23.27■■□□□ 1.32
TRIM29-221ENST00000627238 ANKRD36BQ8N2N9 1353 aa23.26■■□□□ 1.31
TRIM29-221ENST00000627238 MAP3K5Q99683 1374 aa23.26■■□□□ 1.31
TRIM29-221ENST00000627238 COG3Q96JB2 828 aa23.25■■□□□ 1.31
TRIM29-221ENST00000627238 ATF5Q9Y2D1 282 aaPredicted RBP23.25■■□□□ 1.31
TRIM29-221ENST00000627238 MAP3K19Q56UN5 1328 aa23.25■■□□□ 1.31
TRIM29-221ENST00000627238 RTL1A6NKG5 1358 aa23.25■■□□□ 1.31
TRIM29-221ENST00000627238 COL24A1Q17RW2 1714 aa23.25■■□□□ 1.31
TRIM29-221ENST00000627238 SHANK3Q9BYB0 1731 aa23.24■■□□□ 1.31
TRIM29-221ENST00000627238 HOXC9P31274 260 aa23.23■■□□□ 1.31
TRIM29-221ENST00000627238 SLC27A3Q5K4L6 730 aa23.23■■□□□ 1.31
TRIM29-221ENST00000627238 LRRC4BQ9NT99 713 aa23.23■■□□□ 1.31
TRIM29-221ENST00000627238 SYT17Q9BSW7 474 aa23.22■■□□□ 1.31
TRIM29-221ENST00000627238 KAT6BQ8WYB5 2073 aa23.21■■□□□ 1.31
TRIM29-221ENST00000627238 ZNF827Q17R98 1081 aa23.21■■□□□ 1.31
TRIM29-221ENST00000627238 AKT1S1Q96B36 256 aa23.21■■□□□ 1.31
TRIM29-221ENST00000627238 FHDC1Q9C0D6 1143 aaPredicted RBP23.21■■□□□ 1.31
TRIM29-221ENST00000627238 LY75O60449 1722 aa23.21■■□□□ 1.31
TRIM29-221ENST00000627238 RGPD2P0DJD1 1756 aa23.2■■□□□ 1.3
TRIM29-221ENST00000627238 DOT1LQ8TEK3 1739 aa23.2■■□□□ 1.3
TRIM29-221ENST00000627238 NSD2O96028 1365 aa23.18■■□□□ 1.3
TRIM29-221ENST00000627238 SLC16A10Q8TF71 515 aa23.18■■□□□ 1.3
TRIM29-221ENST00000627238 MEGF6O75095 1541 aa23.18■■□□□ 1.3
TRIM29-221ENST00000627238 AMPHP49418 695 aa23.17■■□□□ 1.3
TRIM29-221ENST00000627238 DDX54Q8TDD1 881 aaKnown RBP23.17■■□□□ 1.3
TRIM29-221ENST00000627238 LTV1Q96GA3 475 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms