RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 SLFNL1Q499Z3 407 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 DZIP3Q86Y13 1208 aaKnown RBP7.62□□□□□ -1.19
CDR1-202ENST00000625883 RNF135Q8IUD6 432 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 PLEKHM2Q8IWE5 1019 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 PRKD2Q9BZL6 878 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 ATG7O95352 703 aa7.61□□□□□ -1.19
CDR1-202ENST00000625883 SLC19A1P41440 591 aa7.61□□□□□ -1.19
CDR1-202ENST00000625883 RPIAP49247 311 aa7.61□□□□□ -1.19
CDR1-202ENST00000625883 SKOR1P84550 965 aa7.61□□□□□ -1.19
CDR1-202ENST00000625883 DEPDC4Q8N2C3 294 aa7.61□□□□□ -1.19
CDR1-202ENST00000625883 CD2BP2O95400 341 aaKnown RBP7.6□□□□□ -1.19
CDR1-202ENST00000625883 TSGA10IPQ3SY00 556 aa7.6□□□□□ -1.19
CDR1-202ENST00000625883 TRAF7Q6Q0C0 670 aa7.6□□□□□ -1.19
CDR1-202ENST00000625883 PLPP7Q8NBV4 271 aa7.6□□□□□ -1.19
CDR1-202ENST00000625883 GIGYF1O75420 1035 aaPredicted RBP7.59□□□□□ -1.19
CDR1-202ENST00000625883 NCOA4Q13772 614 aa7.59□□□□□ -1.19
CDR1-202ENST00000625883 TRMT44Q8IYL2 757 aaKnown RBP7.59□□□□□ -1.19
CDR1-202ENST00000625883 SLC10A4Q96EP9 437 aa7.59□□□□□ -1.19
CDR1-202ENST00000625883 VRTNQ9H8Y1 702 aa7.59□□□□□ -1.19
CDR1-202ENST00000625883 EMID1Q96A84 441 aaPredicted RBP7.58□□□□□ -1.2
CDR1-202ENST00000625883 CCDC85AQ96PX6 553 aaPredicted RBP7.58□□□□□ -1.2
CDR1-202ENST00000625883 USTQ9Y2C2 406 aa7.58□□□□□ -1.2
CDR1-202ENST00000625883 CARNS1A5YM72 827 aa7.57□□□□□ -1.2
CDR1-202ENST00000625883 WNT7BP56706 349 aa7.57□□□□□ -1.2
CDR1-202ENST00000625883 ESPNB1AK53 854 aa7.56□□□□□ -1.2
CDR1-202ENST00000625883 CSB-PGBD3P0DP91 1061 aa7.56□□□□□ -1.2
CDR1-202ENST00000625883 MAP7D1Q3KQU3 841 aa7.56□□□□□ -1.2
CDR1-202ENST00000625883 MKRN1Q9UHC7 482 aaKnown RBP7.56□□□□□ -1.2
CDR1-202ENST00000625883 ZMIZ1Q9ULJ6 1067 aa7.56□□□□□ -1.2
CDR1-202ENST00000625883 TMEM88BA6NKF7 163 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 ELOAQ14241 798 aaKnown RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 NBPF20Q3BBV1 942 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 ZNF598Q86UK7 904 aaKnown RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 VARSP26640 1264 aaKnown RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 LAPTM4AQ15012 233 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 CRTC2Q53ET0 693 aaPredicted RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 SPRYD7Q5W111 196 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 LIAT1Q6ZQX7 453 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 CDV3Q9UKY7 258 aaKnown RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 DOLKQ9UPQ8 538 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 FAM196BA6NMK8 535 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L15C9J2P7 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L10C9JJH3 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L13C9JLJ4 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L12C9JPN9 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L11C9JVI0 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L21D6R901 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L18D6R9N7 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L22D6RA61 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L17D6RBQ6 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L19D6RCP7 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L20D6RJB6 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L24Q0WX57 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 EML3Q32P44 896 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 STK32AQ8WU08 396 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 CDCA7Q9BWT1 371 aaPredicted RBP7.54□□□□□ -1.2
CDR1-202ENST00000625883 ATP5J2-PTCD1G3V325 749 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 PDE4CQ08493 712 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 PTK7Q13308 1070 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 ZNF697Q5TEC3 545 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 RNF20Q5VTR2 975 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 SEPT12Q8IYM1 358 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 KCTD15Q96SI1 283 aaPredicted RBP7.53□□□□□ -1.2
CDR1-202ENST00000625883 PODXL2Q9NZ53 605 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 NOVA2Q9UNW9 492 aaKnown RBP7.53□□□□□ -1.2
CDR1-202ENST00000625883 MAP4K5Q9Y4K4 846 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 RASA1P20936 1047 aa7.52□□□□□ -1.21
CDR1-202ENST00000625883 CLDN10P78369 228 aa7.52□□□□□ -1.21
CDR1-202ENST00000625883 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
CDR1-202ENST00000625883 RC3H1Q5TC82 1133 aaKnown RBP7.52□□□□□ -1.21
CDR1-202ENST00000625883 TMEM164Q5U3C3 297 aa7.52□□□□□ -1.21
CDR1-202ENST00000625883 KCTD17Q8N5Z5 321 aa7.52□□□□□ -1.21
CDR1-202ENST00000625883 IRX2Q9BZI1 471 aaPredicted RBP7.52□□□□□ -1.21
CDR1-202ENST00000625883 INTS6LQ5JSJ4 861 aaKnown RBP7.51□□□□□ -1.21
CDR1-202ENST00000625883 AEBP1Q8IUX7 1158 aa7.51□□□□□ -1.21
CDR1-202ENST00000625883 OGFOD1Q8N543 542 aa7.51□□□□□ -1.21
CDR1-202ENST00000625883 EHBP1Q8NDI1 1231 aa7.51□□□□□ -1.21
CDR1-202ENST00000625883 NOD1Q9Y239 953 aa7.51□□□□□ -1.21
CDR1-202ENST00000625883 PCDHB11Q9Y5F2 797 aa7.51□□□□□ -1.21
CDR1-202ENST00000625883 LARP1Q6PKG0 1096 aaKnown RBP7.5□□□□□ -1.21
CDR1-202ENST00000625883 VASH1Q7L8A9 365 aaPredicted RBP7.5□□□□□ -1.21
CDR1-202ENST00000625883 CDK15Q96Q40 435 aa7.5□□□□□ -1.21
CDR1-202ENST00000625883 KIAA1024Q9UPX6 916 aa7.5□□□□□ -1.21
CDR1-202ENST00000625883 TLL2Q9Y6L7 1015 aa7.5□□□□□ -1.21
CDR1-202ENST00000625883 ZBTB7CA1YPR0 619 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 ZBTB7BO15156 539 aaPredicted RBP7.49□□□□□ -1.21
CDR1-202ENST00000625883 SIAH2O43255 324 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 DKK1O94907 266 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 RAB15P59190 212 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 TRIM50Q86XT4 487 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 FAM69CQ0P6D2 419 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 CCDC125Q86Z20 511 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 ANKMY2Q8IV38 441 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 ZNF594Q96JF6 807 aaPredicted RBP7.49□□□□□ -1.21
CDR1-202ENST00000625883 DNAAF2Q9NVR5 837 aaKnown RBP7.49□□□□□ -1.21
CDR1-202ENST00000625883 PDZRN3Q9UPQ7 1066 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 PCDHGA11Q9Y5H2 935 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 ERVH48-1M5A8F1 160 aa7.48□□□□□ -1.21
CDR1-202ENST00000625883 BRD1O95696 1058 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms