RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 SLFNL1Q499Z3 407 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 DZIP3Q86Y13 1208 aaKnown RBP7.62□□□□□ -1.19
CDR1-202ENST00000625883 RNF135Q8IUD6 432 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 PLEKHM2Q8IWE5 1019 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 PRKD2Q9BZL6 878 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 ATG7O95352 703 aa7.61□□□□□ -1.19
CDR1-202ENST00000625883 SLC19A1P41440 591 aa7.61□□□□□ -1.19
CDR1-202ENST00000625883 RPIAP49247 311 aa7.61□□□□□ -1.19
CDR1-202ENST00000625883 SKOR1P84550 965 aa7.61□□□□□ -1.19
CDR1-202ENST00000625883 DEPDC4Q8N2C3 294 aa7.61□□□□□ -1.19
CDR1-202ENST00000625883 CD2BP2O95400 341 aaKnown RBP7.6□□□□□ -1.19
CDR1-202ENST00000625883 TSGA10IPQ3SY00 556 aa7.6□□□□□ -1.19
CDR1-202ENST00000625883 TRAF7Q6Q0C0 670 aa7.6□□□□□ -1.19
CDR1-202ENST00000625883 PLPP7Q8NBV4 271 aa7.6□□□□□ -1.19
CDR1-202ENST00000625883 GIGYF1O75420 1035 aaPredicted RBP7.59□□□□□ -1.19
CDR1-202ENST00000625883 NCOA4Q13772 614 aa7.59□□□□□ -1.19
CDR1-202ENST00000625883 TRMT44Q8IYL2 757 aaKnown RBP7.59□□□□□ -1.19
CDR1-202ENST00000625883 SLC10A4Q96EP9 437 aa7.59□□□□□ -1.19
CDR1-202ENST00000625883 VRTNQ9H8Y1 702 aa7.59□□□□□ -1.19
CDR1-202ENST00000625883 EMID1Q96A84 441 aaPredicted RBP7.58□□□□□ -1.2
CDR1-202ENST00000625883 CCDC85AQ96PX6 553 aaPredicted RBP7.58□□□□□ -1.2
CDR1-202ENST00000625883 USTQ9Y2C2 406 aa7.58□□□□□ -1.2
CDR1-202ENST00000625883 CARNS1A5YM72 827 aa7.57□□□□□ -1.2
CDR1-202ENST00000625883 WNT7BP56706 349 aa7.57□□□□□ -1.2
CDR1-202ENST00000625883 ESPNB1AK53 854 aa7.56□□□□□ -1.2
CDR1-202ENST00000625883 CSB-PGBD3P0DP91 1061 aa7.56□□□□□ -1.2
CDR1-202ENST00000625883 MAP7D1Q3KQU3 841 aa7.56□□□□□ -1.2
CDR1-202ENST00000625883 MKRN1Q9UHC7 482 aaKnown RBP7.56□□□□□ -1.2
CDR1-202ENST00000625883 ZMIZ1Q9ULJ6 1067 aa7.56□□□□□ -1.2
CDR1-202ENST00000625883 TMEM88BA6NKF7 163 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 ELOAQ14241 798 aaKnown RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 NBPF20Q3BBV1 942 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 ZNF598Q86UK7 904 aaKnown RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 VARSP26640 1264 aaKnown RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 LAPTM4AQ15012 233 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 CRTC2Q53ET0 693 aaPredicted RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 SPRYD7Q5W111 196 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 LIAT1Q6ZQX7 453 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 CDV3Q9UKY7 258 aaKnown RBP7.55□□□□□ -1.2
CDR1-202ENST00000625883 DOLKQ9UPQ8 538 aa7.55□□□□□ -1.2
CDR1-202ENST00000625883 FAM196BA6NMK8 535 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L15C9J2P7 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L10C9JJH3 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L13C9JLJ4 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L12C9JPN9 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L11C9JVI0 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L21D6R901 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L18D6R9N7 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L22D6RA61 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L17D6RBQ6 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L19D6RCP7 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L20D6RJB6 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 USP17L24Q0WX57 530 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 EML3Q32P44 896 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 STK32AQ8WU08 396 aa7.54□□□□□ -1.2
CDR1-202ENST00000625883 CDCA7Q9BWT1 371 aaPredicted RBP7.54□□□□□ -1.2
CDR1-202ENST00000625883 ATP5J2-PTCD1G3V325 749 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 PDE4CQ08493 712 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 PTK7Q13308 1070 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 ZNF697Q5TEC3 545 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 RNF20Q5VTR2 975 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 SEPT12Q8IYM1 358 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 KCTD15Q96SI1 283 aaPredicted RBP7.53□□□□□ -1.2
CDR1-202ENST00000625883 PODXL2Q9NZ53 605 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 NOVA2Q9UNW9 492 aaKnown RBP7.53□□□□□ -1.2
CDR1-202ENST00000625883 MAP4K5Q9Y4K4 846 aa7.53□□□□□ -1.2
CDR1-202ENST00000625883 RASA1P20936 1047 aa7.52□□□□□ -1.21
CDR1-202ENST00000625883 CLDN10P78369 228 aa7.52□□□□□ -1.21
CDR1-202ENST00000625883 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
CDR1-202ENST00000625883 RC3H1Q5TC82 1133 aaKnown RBP7.52□□□□□ -1.21
CDR1-202ENST00000625883 TMEM164Q5U3C3 297 aa7.52□□□□□ -1.21
CDR1-202ENST00000625883 KCTD17Q8N5Z5 321 aa7.52□□□□□ -1.21
CDR1-202ENST00000625883 IRX2Q9BZI1 471 aaPredicted RBP7.52□□□□□ -1.21
CDR1-202ENST00000625883 INTS6LQ5JSJ4 861 aaKnown RBP7.51□□□□□ -1.21
CDR1-202ENST00000625883 AEBP1Q8IUX7 1158 aa7.51□□□□□ -1.21
CDR1-202ENST00000625883 OGFOD1Q8N543 542 aa7.51□□□□□ -1.21
CDR1-202ENST00000625883 EHBP1Q8NDI1 1231 aa7.51□□□□□ -1.21
CDR1-202ENST00000625883 NOD1Q9Y239 953 aa7.51□□□□□ -1.21
CDR1-202ENST00000625883 PCDHB11Q9Y5F2 797 aa7.51□□□□□ -1.21
CDR1-202ENST00000625883 LARP1Q6PKG0 1096 aaKnown RBP7.5□□□□□ -1.21
CDR1-202ENST00000625883 VASH1Q7L8A9 365 aaPredicted RBP7.5□□□□□ -1.21
CDR1-202ENST00000625883 CDK15Q96Q40 435 aa7.5□□□□□ -1.21
CDR1-202ENST00000625883 KIAA1024Q9UPX6 916 aa7.5□□□□□ -1.21
CDR1-202ENST00000625883 TLL2Q9Y6L7 1015 aa7.5□□□□□ -1.21
CDR1-202ENST00000625883 ZBTB7CA1YPR0 619 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 ZBTB7BO15156 539 aaPredicted RBP7.49□□□□□ -1.21
CDR1-202ENST00000625883 SIAH2O43255 324 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 DKK1O94907 266 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 RAB15P59190 212 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 TRIM50Q86XT4 487 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 FAM69CQ0P6D2 419 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 CCDC125Q86Z20 511 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 ANKMY2Q8IV38 441 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 ZNF594Q96JF6 807 aaPredicted RBP7.49□□□□□ -1.21
CDR1-202ENST00000625883 DNAAF2Q9NVR5 837 aaKnown RBP7.49□□□□□ -1.21
CDR1-202ENST00000625883 PDZRN3Q9UPQ7 1066 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 PCDHGA11Q9Y5H2 935 aa7.49□□□□□ -1.21
CDR1-202ENST00000625883 ERVH48-1M5A8F1 160 aa7.48□□□□□ -1.21
CDR1-202ENST00000625883 BRD1O95696 1058 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms