RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.59□□□□□ -0.71
SND1-IT1-201ENST00000623342 BRPF1P55201 1214 aaPredicted RBP10.59□□□□□ -0.71
SND1-IT1-201ENST00000623342 RRS1Q15050 365 aaKnown RBP10.59□□□□□ -0.71
SND1-IT1-201ENST00000623342 DEKP35659 375 aaKnown RBP10.58□□□□□ -0.72
SND1-IT1-201ENST00000623342 GNAI1P63096 354 aa10.58□□□□□ -0.72
SND1-IT1-201ENST00000623342 LMOD3Q0VAK6 560 aa10.58□□□□□ -0.72
SND1-IT1-201ENST00000623342 HDAC1Q13547 482 aaPredicted RBP10.58□□□□□ -0.72
SND1-IT1-201ENST00000623342 IFT57Q9NWB7 429 aa10.58□□□□□ -0.72
SND1-IT1-201ENST00000623342 TOPAZ1Q8N9V7 1692 aa10.58□□□□□ -0.72
SND1-IT1-201ENST00000623342 TMEM57Q8N5G2 664 aa10.58□□□□□ -0.72
SND1-IT1-201ENST00000623342 SLC26A8Q96RN1 970 aa10.58□□□□□ -0.72
SND1-IT1-201ENST00000623342 USP35Q9P2H5 1018 aa10.58□□□□□ -0.72
SND1-IT1-201ENST00000623342 FER1L4A9Z1Z3 1794 aa10.58□□□□□ -0.72
SND1-IT1-201ENST00000623342 NRKQ7Z2Y5 1582 aa10.57□□□□□ -0.72
SND1-IT1-201ENST00000623342 PLEKHG3A1L390 1219 aa10.57□□□□□ -0.72
SND1-IT1-201ENST00000623342 EID1Q9Y6B2 187 aa10.57□□□□□ -0.72
SND1-IT1-201ENST00000623342 USP19O94966 1318 aa10.57□□□□□ -0.72
SND1-IT1-201ENST00000623342 TTC21BQ7Z4L5 1316 aa10.57□□□□□ -0.72
SND1-IT1-201ENST00000623342 ZNF853P0CG23 659 aa10.57□□□□□ -0.72
SND1-IT1-201ENST00000623342 THUMPD2Q9BTF0 503 aaKnown RBP10.57□□□□□ -0.72
SND1-IT1-201ENST00000623342 ACEP12821 1306 aa10.56□□□□□ -0.72
SND1-IT1-201ENST00000623342 NUTM2FA1L443 756 aa10.56□□□□□ -0.72
SND1-IT1-201ENST00000623342 VAMP4O75379 141 aa10.56□□□□□ -0.72
SND1-IT1-201ENST00000623342 SLC4A3P48751 1232 aa10.56□□□□□ -0.72
SND1-IT1-201ENST00000623342 ZBTB40Q9NUA8 1239 aa10.56□□□□□ -0.72
SND1-IT1-201ENST00000623342 SEC24BO95487 1268 aa10.56□□□□□ -0.72
SND1-IT1-201ENST00000623342 SLIT1O75093 1534 aa10.55□□□□□ -0.72
SND1-IT1-201ENST00000623342 OVOS2A0A0J9YW53 1432 aa10.55□□□□□ -0.72
SND1-IT1-201ENST00000623342 USP6P35125 1406 aa10.55□□□□□ -0.72
SND1-IT1-201ENST00000623342 OVOS2Q6IE36 1432 aa10.55□□□□□ -0.72
SND1-IT1-201ENST00000623342 PTPRUQ92729 1446 aa10.55□□□□□ -0.72
SND1-IT1-201ENST00000623342 ARHGAP45Q92619 1136 aa10.55□□□□□ -0.72
SND1-IT1-201ENST00000623342 DLG5Q8TDM6 1919 aa10.55□□□□□ -0.72
SND1-IT1-201ENST00000623342 MRPL50Q8N5N7 158 aaKnown RBP10.55□□□□□ -0.72
SND1-IT1-201ENST00000623342 CFAP44Q96MT7 982 aa10.55□□□□□ -0.72
SND1-IT1-201ENST00000623342 MBIPQ9NS73 344 aa10.55□□□□□ -0.72
SND1-IT1-201ENST00000623342 ARHGAP23Q9P227 1491 aa10.54□□□□□ -0.72
SND1-IT1-201ENST00000623342 SMC5Q8IY18 1101 aa10.54□□□□□ -0.72
SND1-IT1-201ENST00000623342 EIF4A2Q14240 407 aaKnown RBP10.53□□□□□ -0.72
SND1-IT1-201ENST00000623342 TSPYL6Q8N831 410 aa10.53□□□□□ -0.72
SND1-IT1-201ENST00000623342 CHMP4BQ9H444 224 aaKnown RBP10.53□□□□□ -0.72
SND1-IT1-201ENST00000623342 UPF2Q9HAU5 1272 aaKnown RBP10.53□□□□□ -0.72
SND1-IT1-201ENST00000623342 AMOTL2Q9Y2J4 779 aa10.53□□□□□ -0.72
SND1-IT1-201ENST00000623342 TBX22Q9Y458 520 aa10.53□□□□□ -0.72
SND1-IT1-201ENST00000623342 PTCH1Q13635 1447 aa10.53□□□□□ -0.72
SND1-IT1-201ENST00000623342 NALCNQ8IZF0 1738 aa10.53□□□□□ -0.72
SND1-IT1-201ENST00000623342 TWISTNBQ3B726 338 aaPredicted RBP10.52□□□□□ -0.72
SND1-IT1-201ENST00000623342 USP31Q70CQ4 1352 aa10.52□□□□□ -0.72
SND1-IT1-201ENST00000623342 PIK3R4Q99570 1358 aa10.52□□□□□ -0.72
SND1-IT1-201ENST00000623342 SSH2Q76I76 1423 aa10.52□□□□□ -0.72
SND1-IT1-201ENST00000623342 SULT6B1Q6IMI4 303 aa10.52□□□□□ -0.73
SND1-IT1-201ENST00000623342 RBM33Q96EV2 1170 aaKnown RBP10.52□□□□□ -0.73
SND1-IT1-201ENST00000623342 FAM83GA6ND36 823 aa10.51□□□□□ -0.73
SND1-IT1-201ENST00000623342 DNAJC5Q9H3Z4 198 aa10.51□□□□□ -0.73
SND1-IT1-201ENST00000623342 TTC21AQ8NDW8 1320 aa10.51□□□□□ -0.73
SND1-IT1-201ENST00000623342 DIP2AQ14689 1571 aa10.51□□□□□ -0.73
SND1-IT1-201ENST00000623342 ELL2O00472 640 aaPredicted RBP10.51□□□□□ -0.73
SND1-IT1-201ENST00000623342 RIMS1Q86UR5 1692 aaKnown RBP10.51□□□□□ -0.73
SND1-IT1-201ENST00000623342 AEBP1Q8IUX7 1158 aa10.51□□□□□ -0.73
SND1-IT1-201ENST00000623342 THEMISQ8N1K5 641 aaPredicted RBP10.51□□□□□ -0.73
SND1-IT1-201ENST00000623342 C8orf58Q8NAV2 365 aa10.51□□□□□ -0.73
SND1-IT1-201ENST00000623342 PEAK1Q9H792 1746 aa10.51□□□□□ -0.73
SND1-IT1-201ENST00000623342 ZBTB7BO15156 539 aaPredicted RBP10.5□□□□□ -0.73
SND1-IT1-201ENST00000623342 BECN1Q14457 450 aa10.5□□□□□ -0.73
SND1-IT1-201ENST00000623342 TBC1D32Q96NH3 1257 aa10.5□□□□□ -0.73
SND1-IT1-201ENST00000623342 ABCC4O15439 1325 aa10.5□□□□□ -0.73
SND1-IT1-201ENST00000623342 NUCB1Q02818 461 aa10.5□□□□□ -0.73
SND1-IT1-201ENST00000623342 DCTN1Q14203 1278 aa10.5□□□□□ -0.73
SND1-IT1-201ENST00000623342 RGPD1P0DJD0 1748 aa10.5□□□□□ -0.73
SND1-IT1-201ENST00000623342 NFKBIBQ15653 356 aa10.49□□□□□ -0.73
SND1-IT1-201ENST00000623342 HSP90AB2PQ58FF8 381 aa10.49□□□□□ -0.73
SND1-IT1-201ENST00000623342 API5Q9BZZ5 524 aaKnown RBP10.49□□□□□ -0.73
SND1-IT1-201ENST00000623342 HAP1P54257 671 aaPredicted RBP10.48□□□□□ -0.73
SND1-IT1-201ENST00000623342 RGPD8O14715 1765 aaPredicted RBP10.48□□□□□ -0.73
SND1-IT1-201ENST00000623342 NGDNQ8NEJ9 315 aaKnown RBP10.48□□□□□ -0.73
SND1-IT1-201ENST00000623342 ARHGEF10O15013 1369 aa10.48□□□□□ -0.73
SND1-IT1-201ENST00000623342 CHL1O00533 1208 aa10.47□□□□□ -0.73
SND1-IT1-201ENST00000623342 CHD1LQ86WJ1 897 aa10.47□□□□□ -0.73
SND1-IT1-201ENST00000623342 GCC1Q96CN9 775 aa10.47□□□□□ -0.73
SND1-IT1-201ENST00000623342 XRN1Q8IZH2 1706 aaKnown RBP10.47□□□□□ -0.73
SND1-IT1-201ENST00000623342 SBNO1A3KN83 1393 aa10.47□□□□□ -0.73
SND1-IT1-201ENST00000623342 KIF24Q5T7B8 1368 aa10.47□□□□□ -0.73
SND1-IT1-201ENST00000623342 MAP3K19Q56UN5 1328 aa10.47□□□□□ -0.73
SND1-IT1-201ENST00000623342 SOX12O15370 315 aa10.47□□□□□ -0.73
SND1-IT1-201ENST00000623342 FMN2Q9NZ56 1722 aa10.47□□□□□ -0.73
SND1-IT1-201ENST00000623342 FLT4P35916 1363 aa10.47□□□□□ -0.73
SND1-IT1-201ENST00000623342 KIAA0232Q92628 1395 aa10.46□□□□□ -0.73
SND1-IT1-201ENST00000623342 ANKARQ7Z5J8 1434 aa10.46□□□□□ -0.74
SND1-IT1-201ENST00000623342 MCM10Q7L590 875 aa10.46□□□□□ -0.74
SND1-IT1-201ENST00000623342 LNPKQ9C0E8 428 aa10.46□□□□□ -0.74
SND1-IT1-201ENST00000623342 C1orf115Q9H7X2 142 aa10.46□□□□□ -0.74
SND1-IT1-201ENST00000623342 C22orf23Q9BZE7 217 aa10.45□□□□□ -0.74
SND1-IT1-201ENST00000623342 PIK3C2AO00443 1686 aa10.45□□□□□ -0.74
SND1-IT1-201ENST00000623342 CRB1P82279 1406 aa10.44□□□□□ -0.74
SND1-IT1-201ENST00000623342 AMPHP49418 695 aa10.44□□□□□ -0.74
SND1-IT1-201ENST00000623342 MFAP1P55081 439 aaKnown RBP10.44□□□□□ -0.74
SND1-IT1-201ENST00000623342 ANKRD45Q5TZF3 282 aa10.44□□□□□ -0.74
SND1-IT1-201ENST00000623342 BCL11AQ9H165 835 aa10.44□□□□□ -0.74
SND1-IT1-201ENST00000623342 KDRP35968 1356 aa10.44□□□□□ -0.74
SND1-IT1-201ENST00000623342 INTS3Q68E01 1043 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms