RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 TMC1Q8TDI8 760 aa29.62■■■□□ 2.33
PMPCA-212ENST00000622209 ST20-MTHFSA0A0A6YYL1 179 aa29.61■■■□□ 2.33
PMPCA-212ENST00000622209 WDR17Q8IZU2 1322 aa29.6■■■□□ 2.33
PMPCA-212ENST00000622209 USP47Q96K76 1375 aa29.6■■■□□ 2.33
PMPCA-212ENST00000622209 TNS1Q9HBL0 1735 aaKnown RBP29.59■■■□□ 2.33
PMPCA-212ENST00000622209 CSB-PGBD3P0DP91 1061 aa29.59■■■□□ 2.33
PMPCA-212ENST00000622209 DDB1Q16531 1140 aa29.59■■■□□ 2.33
PMPCA-212ENST00000622209 SLC12A5Q9H2X9 1139 aa29.57■■■□□ 2.32
PMPCA-212ENST00000622209 TESK2Q96S53 571 aa29.56■■■□□ 2.32
PMPCA-212ENST00000622209 PARD3Q8TEW0 1356 aa29.55■■■□□ 2.32
PMPCA-212ENST00000622209 NME9Q86XW9 330 aa29.55■■■□□ 2.32
PMPCA-212ENST00000622209 HDGFL2Q7Z4V5 671 aaPredicted RBP29.54■■■□□ 2.32
PMPCA-212ENST00000622209 C11orf95C9JLR9 678 aaPredicted RBP29.53■■■□□ 2.32
PMPCA-212ENST00000622209 PUS7Q96PZ0 661 aaKnown RBP29.53■■■□□ 2.32
PMPCA-212ENST00000622209 CARD10Q9BWT7 1032 aa29.53■■■□□ 2.32
PMPCA-212ENST00000622209 COL18A1P39060 1754 aa29.52■■■□□ 2.32
PMPCA-212ENST00000622209 OVOS2A0A0G2JMS6 1433 aa29.51■■■□□ 2.31
PMPCA-212ENST00000622209 OVOS2A0A0J9YW53 1432 aa29.51■■■□□ 2.31
PMPCA-212ENST00000622209 OVOS2Q6IE36 1432 aa29.51■■■□□ 2.31
PMPCA-212ENST00000622209 AKAP12Q02952 1782 aa29.51■■■□□ 2.31
PMPCA-212ENST00000622209 NBPF14Q5TI25 921 aa29.5■■■□□ 2.31
PMPCA-212ENST00000622209 MARCH10Q8NA82 808 aaPredicted RBP29.5■■■□□ 2.31
PMPCA-212ENST00000622209 CDCA7Q9BWT1 371 aaPredicted RBP29.5■■■□□ 2.31
PMPCA-212ENST00000622209 CD163L1Q9NR16 1453 aa29.49■■■□□ 2.31
PMPCA-212ENST00000622209 PARP4Q9UKK3 1724 aaKnown RBP29.49■■■□□ 2.31
PMPCA-212ENST00000622209 USP31Q70CQ4 1352 aa29.49■■■□□ 2.31
PMPCA-212ENST00000622209 LRP5O75197 1615 aa29.49■■■□□ 2.31
PMPCA-212ENST00000622209 PTF1AQ7RTS3 328 aa29.48■■■□□ 2.31
PMPCA-212ENST00000622209 TERF2IPQ9NYB0 399 aa29.48■■■□□ 2.31
PMPCA-212ENST00000622209 NFAT5O94916 1531 aa29.48■■■□□ 2.31
PMPCA-212ENST00000622209 EXOC5O00471 708 aa29.45■■■□□ 2.31
PMPCA-212ENST00000622209 TMF1P82094 1093 aa29.45■■■□□ 2.31
PMPCA-212ENST00000622209 EIF4G2P78344 907 aaKnown RBP eCLIP29.44■■■□□ 2.3
PMPCA-212ENST00000622209 BCL11BQ9C0K0 894 aaPredicted RBP29.44■■■□□ 2.3
PMPCA-212ENST00000622209 NLRP2Q9NX02 1062 aa29.43■■■□□ 2.3
PMPCA-212ENST00000622209 LRRC37A3O60309 1634 aa29.42■■■□□ 2.3
PMPCA-212ENST00000622209 A0A1W2PP64 1363 aa29.41■■■□□ 2.3
PMPCA-212ENST00000622209 PLSCR1O15162 318 aa29.41■■■□□ 2.3
PMPCA-212ENST00000622209 EDC4Q6P2E9 1401 aaKnown RBP29.41■■■□□ 2.3
PMPCA-212ENST00000622209 CCDC7Q96M83 1385 aa29.4■■■□□ 2.3
PMPCA-212ENST00000622209 MON2Q7Z3U7 1717 aa29.4■■■□□ 2.3
PMPCA-212ENST00000622209 PEAK1Q9H792 1746 aa29.4■■■□□ 2.3
PMPCA-212ENST00000622209 CDCA8Q53HL2 280 aa29.39■■■□□ 2.3
PMPCA-212ENST00000622209 ANKRD24Q8TF21 1146 aa29.38■■■□□ 2.29
PMPCA-212ENST00000622209 ERBB3P21860 1342 aa29.38■■■□□ 2.29
PMPCA-212ENST00000622209 RGPD5Q99666 1765 aa29.36■■■□□ 2.29
PMPCA-212ENST00000622209 HSPA5P11021 654 aaKnown RBP29.36■■■□□ 2.29
PMPCA-212ENST00000622209 RREB1Q92766 1687 aa29.35■■■□□ 2.29
PMPCA-212ENST00000622209 NINLQ9Y2I6 1382 aa29.35■■■□□ 2.29
PMPCA-212ENST00000622209 PROM2Q8N271 834 aa29.34■■■□□ 2.29
PMPCA-212ENST00000622209 NUP188Q5SRE5 1749 aa29.34■■■□□ 2.29
PMPCA-212ENST00000622209 BCL9O00512 1426 aa29.33■■■□□ 2.29
PMPCA-212ENST00000622209 ABCC6O95255 1503 aa29.33■■■□□ 2.29
PMPCA-212ENST00000622209 KCNQ2O43526 872 aa29.32■■■□□ 2.28
PMPCA-212ENST00000622209 IL2RBP14784 551 aa29.31■■■□□ 2.28
PMPCA-212ENST00000622209 LTV1Q96GA3 475 aaPredicted RBP29.31■■■□□ 2.28
PMPCA-212ENST00000622209 ANO8Q9HCE9 1232 aaPredicted RBP29.31■■■□□ 2.28
PMPCA-212ENST00000622209 ACSBG1Q96GR2 724 aa29.3■■■□□ 2.28
PMPCA-212ENST00000622209 COG3Q96JB2 828 aa29.3■■■□□ 2.28
PMPCA-212ENST00000622209 IP6K1Q92551 441 aa29.29■■■□□ 2.28
PMPCA-212ENST00000622209 TNS2Q63HR2 1409 aa29.28■■■□□ 2.28
PMPCA-212ENST00000622209 FBLN1P23142 703 aa29.28■■■□□ 2.28
PMPCA-212ENST00000622209 SPON1Q9HCB6 807 aa29.28■■■□□ 2.28
PMPCA-212ENST00000622209 WNK3Q9BYP7 1800 aa29.27■■■□□ 2.28
PMPCA-212ENST00000622209 TXNRD1Q16881 649 aa29.27■■■□□ 2.28
PMPCA-212ENST00000622209 USP54Q70EL1 1684 aa29.26■■■□□ 2.27
PMPCA-212ENST00000622209 PPP1R1BQ9UD71 204 aaPredicted RBP29.25■■■□□ 2.27
PMPCA-212ENST00000622209 SBF2Q86WG5 1849 aa29.24■■■□□ 2.27
PMPCA-212ENST00000622209 MAP3K19Q56UN5 1328 aa29.22■■■□□ 2.27
PMPCA-212ENST00000622209 AMPHP49418 695 aa29.22■■■□□ 2.27
PMPCA-212ENST00000622209 PDGFDQ9GZP0 370 aaPredicted RBP29.22■■■□□ 2.27
PMPCA-212ENST00000622209 ANKRD36BQ8N2N9 1353 aa29.21■■■□□ 2.27
PMPCA-212ENST00000622209 HOXC9P31274 260 aa29.2■■■□□ 2.26
PMPCA-212ENST00000622209 STK32BQ9NY57 414 aa29.2■■■□□ 2.26
PMPCA-212ENST00000622209 LTN1O94822 1766 aa29.2■■■□□ 2.26
PMPCA-212ENST00000622209 DDX54Q8TDD1 881 aaKnown RBP29.19■■■□□ 2.26
PMPCA-212ENST00000622209 GGNBP2Q9H3C7 697 aa29.19■■■□□ 2.26
PMPCA-212ENST00000622209 FYB1O15117 783 aa29.17■■■□□ 2.26
PMPCA-212ENST00000622209 ZBTB7AO95365 584 aa29.17■■■□□ 2.26
PMPCA-212ENST00000622209 RGPD3A6NKT7 1758 aaPredicted RBP29.16■■■□□ 2.26
PMPCA-212ENST00000622209 RGPD4Q7Z3J3 1758 aa29.16■■■□□ 2.26
PMPCA-212ENST00000622209 RRS1Q15050 365 aaKnown RBP29.16■■■□□ 2.26
PMPCA-212ENST00000622209 SLC15A2Q16348 729 aa29.16■■■□□ 2.26
PMPCA-212ENST00000622209 ATF5Q9Y2D1 282 aaPredicted RBP29.13■■■□□ 2.25
PMPCA-212ENST00000622209 POLR3GLQ9BT43 218 aa29.12■■■□□ 2.25
PMPCA-212ENST00000622209 MYOM1P52179 1685 aa29.09■■■□□ 2.25
PMPCA-212ENST00000622209 NBPF6Q5VWK0 638 aa29.08■■■□□ 2.25
PMPCA-212ENST00000622209 NBPF4Q96M43 638 aa29.08■■■□□ 2.25
PMPCA-212ENST00000622209 NHSQ6T4R5 1651 aa29.07■■■□□ 2.24
PMPCA-212ENST00000622209 USHBP1Q8N6Y0 703 aa29.07■■■□□ 2.24
PMPCA-212ENST00000622209 ZCRB1Q8TBF4 217 aaKnown RBP29.07■■■□□ 2.24
PMPCA-212ENST00000622209 SYTL4Q96C24 671 aaPredicted RBP29.07■■■□□ 2.24
PMPCA-212ENST00000622209 PTGER2P43116 358 aa29.05■■■□□ 2.24
PMPCA-212ENST00000622209 PRIM1P49642 420 aaKnown RBP29.05■■■□□ 2.24
PMPCA-212ENST00000622209 CARD14Q9BXL6 1004 aa29.05■■■□□ 2.24
PMPCA-212ENST00000622209 LRRC4BQ9NT99 713 aa29.05■■■□□ 2.24
PMPCA-212ENST00000622209 RTL1A6NKG5 1358 aa29.04■■■□□ 2.24
PMPCA-212ENST00000622209 HSP90AB2PQ58FF8 381 aa29.03■■■□□ 2.24
PMPCA-212ENST00000622209 KIF7Q2M1P5 1343 aa29.02■■■□□ 2.24
PMPCA-212ENST00000622209 DCAF8L1A6NGE4 600 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms