RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 CLIP2Q9UDT6 1046 aa13.65□□□□□ -0.22
CLTC-215ENST00000621829 IFFO1Q0D2I5 559 aa13.65□□□□□ -0.22
CLTC-215ENST00000621829 LARP1BQ659C4 914 aaKnown RBP13.65□□□□□ -0.22
CLTC-215ENST00000621829 GTPBP4Q9BZE4 634 aaKnown RBP13.65□□□□□ -0.22
CLTC-215ENST00000621829 PIP4K2AP48426 406 aaPredicted RBP13.65□□□□□ -0.22
CLTC-215ENST00000621829 SERPINA10Q9UK55 444 aa13.65□□□□□ -0.22
CLTC-215ENST00000621829 KIF4BQ2VIQ3 1234 aa13.65□□□□□ -0.23
CLTC-215ENST00000621829 KIF5CO60282 957 aa13.64□□□□□ -0.23
CLTC-215ENST00000621829 BMS1Q14692 1282 aaKnown RBP13.64□□□□□ -0.23
CLTC-215ENST00000621829 LUZP1Q86V48 1076 aa13.64□□□□□ -0.23
CLTC-215ENST00000621829 CTDP1Q9Y5B0 961 aaPredicted RBP13.64□□□□□ -0.23
CLTC-215ENST00000621829 CEP57L1Q8IYX8 460 aa13.64□□□□□ -0.23
CLTC-215ENST00000621829 NEUROD6Q96NK8 337 aa13.64□□□□□ -0.23
CLTC-215ENST00000621829 USP25Q9UHP3 1055 aa13.64□□□□□ -0.23
CLTC-215ENST00000621829 CCDC160A6NGH7 325 aa13.64□□□□□ -0.23
CLTC-215ENST00000621829 CCDC175P0C221 793 aa13.64□□□□□ -0.23
CLTC-215ENST00000621829 SFPQP23246 707 aaKnown RBP eCLIP13.64□□□□□ -0.23
CLTC-215ENST00000621829 VPS37DQ86XT2 251 aa13.64□□□□□ -0.23
CLTC-215ENST00000621829 SOGA1O94964 1423 aa13.64□□□□□ -0.23
CLTC-215ENST00000621829 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
CLTC-215ENST00000621829 CEP57Q86XR8 500 aa13.64□□□□□ -0.23
CLTC-215ENST00000621829 MAP4K4O95819 1239 aaPredicted RBP13.63□□□□□ -0.23
CLTC-215ENST00000621829 FSD1Q9BTV5 496 aa13.63□□□□□ -0.23
CLTC-215ENST00000621829 MCM3P25205 808 aa13.63□□□□□ -0.23
CLTC-215ENST00000621829 TRAK1Q9UPV9 953 aa13.63□□□□□ -0.23
CLTC-215ENST00000621829 ZSCAN12O43309 604 aa13.63□□□□□ -0.23
CLTC-215ENST00000621829 SMTNL1A8MU46 457 aa13.62□□□□□ -0.23
CLTC-215ENST00000621829 CEP135Q66GS9 1140 aa13.62□□□□□ -0.23
CLTC-215ENST00000621829 GGT6Q6P531 493 aa13.62□□□□□ -0.23
CLTC-215ENST00000621829 RUNDC1Q96C34 613 aa13.62□□□□□ -0.23
CLTC-215ENST00000621829 C11orf95C9JLR9 678 aaPredicted RBP13.62□□□□□ -0.23
CLTC-215ENST00000621829 STIM1Q13586 685 aa13.62□□□□□ -0.23
CLTC-215ENST00000621829 DNA2P51530 1060 aa13.62□□□□□ -0.23
CLTC-215ENST00000621829 HDGFP51858 240 aaKnown RBP13.62□□□□□ -0.23
CLTC-215ENST00000621829 CPSF2Q9P2I0 782 aaKnown RBP13.62□□□□□ -0.23
CLTC-215ENST00000621829 TAF4BQ92750 862 aa13.62□□□□□ -0.23
CLTC-215ENST00000621829 ZNF830Q96NB3 372 aaPredicted RBP13.61□□□□□ -0.23
CLTC-215ENST00000621829 ADCY5O95622 1261 aa13.61□□□□□ -0.23
CLTC-215ENST00000621829 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
CLTC-215ENST00000621829 CCDC94Q9BW85 323 aaPredicted RBP13.61□□□□□ -0.23
CLTC-215ENST00000621829 SARNPP82979 210 aaKnown RBP13.61□□□□□ -0.23
CLTC-215ENST00000621829 AAMPQ13685 434 aa13.61□□□□□ -0.23
CLTC-215ENST00000621829 CCDC183Q5T5S1 534 aa13.61□□□□□ -0.23
CLTC-215ENST00000621829 JMYQ8N9B5 988 aa13.61□□□□□ -0.23
CLTC-215ENST00000621829 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
CLTC-215ENST00000621829 CYP46A1Q9Y6A2 500 aa13.61□□□□□ -0.23
CLTC-215ENST00000621829 KRI1Q8N9T8 703 aaKnown RBP13.61□□□□□ -0.23
CLTC-215ENST00000621829 IVLP07476 585 aa13.6□□□□□ -0.23
CLTC-215ENST00000621829 SCLT1Q96NL6 688 aa13.6□□□□□ -0.23
CLTC-215ENST00000621829 ZSWIM4Q9H7M6 989 aa13.6□□□□□ -0.23
CLTC-215ENST00000621829 CCDC178Q5BJE1 867 aa13.6□□□□□ -0.23
CLTC-215ENST00000621829 ZHX3Q9H4I2 956 aa13.6□□□□□ -0.23
CLTC-215ENST00000621829 HSPA4P34932 840 aa13.6□□□□□ -0.23
CLTC-215ENST00000621829 C1orf141Q5JVX7 400 aa13.6□□□□□ -0.23
CLTC-215ENST00000621829 ARID4AP29374 1257 aaPredicted RBP13.6□□□□□ -0.23
CLTC-215ENST00000621829 PRIMPOLQ96LW4 560 aa13.6□□□□□ -0.23
CLTC-215ENST00000621829 EIF5P55010 431 aaKnown RBP13.59□□□□□ -0.23
CLTC-215ENST00000621829 LIG1P18858 919 aa13.59□□□□□ -0.23
CLTC-215ENST00000621829 CLCN1P35523 988 aa13.59□□□□□ -0.23
CLTC-215ENST00000621829 DAAM2Q86T65 1068 aa13.59□□□□□ -0.23
CLTC-215ENST00000621829 CNTLNQ9NXG0 1405 aa13.58□□□□□ -0.23
CLTC-215ENST00000621829 BCAR3O75815 825 aa13.58□□□□□ -0.23
CLTC-215ENST00000621829 NGDNQ8NEJ9 315 aaKnown RBP13.58□□□□□ -0.23
CLTC-215ENST00000621829 SMC1AQ14683 1233 aaKnown RBP13.58□□□□□ -0.24
CLTC-215ENST00000621829 HSP90AB4PQ58FF6 505 aa13.58□□□□□ -0.24
CLTC-215ENST00000621829 TMCO5BA8MYB1 307 aa13.58□□□□□ -0.24
CLTC-215ENST00000621829 SSR1P43307 286 aaKnown RBP13.58□□□□□ -0.24
CLTC-215ENST00000621829 SNW1Q13573 536 aaKnown RBP13.58□□□□□ -0.24
CLTC-215ENST00000621829 SPECC1Q5M775 1068 aa13.58□□□□□ -0.24
CLTC-215ENST00000621829 NAA25Q14CX7 972 aa13.58□□□□□ -0.24
CLTC-215ENST00000621829 UBTFL1P0CB47 393 aaPredicted RBP13.58□□□□□ -0.24
CLTC-215ENST00000621829 TEFQ10587 303 aa13.58□□□□□ -0.24
CLTC-215ENST00000621829 PAF1Q8N7H5 531 aa13.57□□□□□ -0.24
CLTC-215ENST00000621829 PUS7Q96PZ0 661 aaKnown RBP13.57□□□□□ -0.24
CLTC-215ENST00000621829 MSL1Q68DK7 614 aa13.57□□□□□ -0.24
CLTC-215ENST00000621829 GIGYF2Q6Y7W6 1299 aaKnown RBP13.57□□□□□ -0.24
CLTC-215ENST00000621829 SKAP1Q86WV1 359 aa13.57□□□□□ -0.24
CLTC-215ENST00000621829 FAM177BA6PVY3 158 aa13.57□□□□□ -0.24
CLTC-215ENST00000621829 GCOM1H8Y6P7 765 aaPredicted RBP13.57□□□□□ -0.24
CLTC-215ENST00000621829 MYZAPP0CAP1 466 aa13.57□□□□□ -0.24
CLTC-215ENST00000621829 MAATS1Q7Z4T9 603 aa13.57□□□□□ -0.24
CLTC-215ENST00000621829 GBP6Q6ZN66 633 aa13.57□□□□□ -0.24
CLTC-215ENST00000621829 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
CLTC-215ENST00000621829 ZNF397Q8NF99 534 aaPredicted RBP13.57□□□□□ -0.24
CLTC-215ENST00000621829 HYPKQ9NX55 129 aa13.57□□□□□ -0.24
CLTC-215ENST00000621829 TOP1P11387 765 aaKnown RBP13.57□□□□□ -0.24
CLTC-215ENST00000621829 STAMBPO95630 424 aa13.56□□□□□ -0.24
CLTC-215ENST00000621829 MCM6Q14566 821 aa13.56□□□□□ -0.24
CLTC-215ENST00000621829 PAXBP1Q9Y5B6 917 aa13.56□□□□□ -0.24
CLTC-215ENST00000621829 DRC1Q96MC2 740 aa13.56□□□□□ -0.24
CLTC-215ENST00000621829 RASSF4Q9H2L5 321 aa13.56□□□□□ -0.24
CLTC-215ENST00000621829 HLTFQ14527 1009 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLTC-215ENST00000621829 HMOX1P09601 288 aa13.56□□□□□ -0.24
CLTC-215ENST00000621829 SPECC1LQ69YQ0 1117 aa13.56□□□□□ -0.24
CLTC-215ENST00000621829 TNPO1Q92973 898 aaKnown RBP13.56□□□□□ -0.24
CLTC-215ENST00000621829 IMMTQ16891 758 aaKnown RBP13.56□□□□□ -0.24
CLTC-215ENST00000621829 CAPN2P17655 700 aa13.56□□□□□ -0.24
CLTC-215ENST00000621829 NOB1Q9ULX3 412 aaKnown RBP13.56□□□□□ -0.24
CLTC-215ENST00000621829 SPA17Q15506 151 aa13.56□□□□□ -0.24
CLTC-215ENST00000621829 PPM1EQ8WY54 764 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms