RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 KCNJ4P48050 445 aa11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 GTPBP4Q9BZE4 634 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 CHMP3Q9Y3E7 222 aa11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 GTF2E1P29083 439 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 RABEP1Q15276 862 aa11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 SLC12A5Q9H2X9 1139 aa11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 ADGRF5Q8IZF2 1346 aa11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 RTEL1-TNFRSF6BF6WH68 1400 aa11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 MAGI2Q86UL8 1455 aa11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 NEK4P51957 841 aa11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 CASC1Q6TDU7 716 aa11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 COL17A1Q9UMD9 1497 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-210ENST00000620204 NUCB1Q02818 461 aa11.9□□□□□ -0.5
TNFAIP3-210ENST00000620204 HDAC1Q13547 482 aaPredicted RBP11.9□□□□□ -0.5
TNFAIP3-210ENST00000620204 WDR63Q8IWG1 891 aa11.9□□□□□ -0.5
TNFAIP3-210ENST00000620204 LETM1O95202 739 aaPredicted RBP11.9□□□□□ -0.5
TNFAIP3-210ENST00000620204 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
TNFAIP3-210ENST00000620204 NPHP1O15259 732 aa11.9□□□□□ -0.5
TNFAIP3-210ENST00000620204 DDIT3P35638 169 aa11.9□□□□□ -0.5
TNFAIP3-210ENST00000620204 BMP2KLQ5H9B9 411 aa11.9□□□□□ -0.5
TNFAIP3-210ENST00000620204 UTP14CQ5TAP6 766 aaKnown RBP11.9□□□□□ -0.5
TNFAIP3-210ENST00000620204 CARD14Q9BXL6 1004 aa11.9□□□□□ -0.5
TNFAIP3-210ENST00000620204 KIF20AO95235 890 aa11.89□□□□□ -0.51
TNFAIP3-210ENST00000620204 KIF2CQ99661 725 aa11.89□□□□□ -0.51
TNFAIP3-210ENST00000620204 UGGT1Q9NYU2 1555 aa11.89□□□□□ -0.51
TNFAIP3-210ENST00000620204 INSRP06213 1382 aa11.89□□□□□ -0.51
TNFAIP3-210ENST00000620204 CEBPAP49715 358 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP3-210ENST00000620204 AK9Q5TCS8 1911 aa11.89□□□□□ -0.51
TNFAIP3-210ENST00000620204 ADCY5O95622 1261 aa11.89□□□□□ -0.51
TNFAIP3-210ENST00000620204 IDI1Q13907 227 aa11.89□□□□□ -0.51
TNFAIP3-210ENST00000620204 PLA2R1Q13018 1463 aa11.89□□□□□ -0.51
TNFAIP3-210ENST00000620204 PDLIM2Q96JY6 352 aa11.88□□□□□ -0.51
TNFAIP3-210ENST00000620204 HCLS1P14317 486 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP3-210ENST00000620204 PDIA4P13667 645 aaKnown RBP11.88□□□□□ -0.51
TNFAIP3-210ENST00000620204 PRIMPOLQ96LW4 560 aa11.88□□□□□ -0.51
TNFAIP3-210ENST00000620204 MBD3O95983 291 aa11.87□□□□□ -0.51
TNFAIP3-210ENST00000620204 DIAPH3Q9NSV4 1193 aa11.87□□□□□ -0.51
TNFAIP3-210ENST00000620204 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
TNFAIP3-210ENST00000620204 C16orf71Q8IYS4 520 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP3-210ENST00000620204 DTNBO60941 627 aa11.86□□□□□ -0.51
TNFAIP3-210ENST00000620204 MAST1Q9Y2H9 1570 aa11.86□□□□□ -0.51
TNFAIP3-210ENST00000620204 AEBP1Q8IUX7 1158 aa11.86□□□□□ -0.51
TNFAIP3-210ENST00000620204 ZBTB40Q9NUA8 1239 aa11.86□□□□□ -0.51
TNFAIP3-210ENST00000620204 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-210ENST00000620204 CCDC27Q2M243 656 aa11.86□□□□□ -0.51
TNFAIP3-210ENST00000620204 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
TNFAIP3-210ENST00000620204 PHF14O94880 888 aa11.85□□□□□ -0.51
TNFAIP3-210ENST00000620204 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-210ENST00000620204 CWC22Q9HCG8 908 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-210ENST00000620204 PLXNC1O60486 1568 aa11.85□□□□□ -0.51
TNFAIP3-210ENST00000620204 GPRASP1Q5JY77 1395 aa11.84□□□□□ -0.51
TNFAIP3-210ENST00000620204 C16orf45Q96MC5 204 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-210ENST00000620204 SMARCA5O60264 1052 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-210ENST00000620204 INTS3Q68E01 1043 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-210ENST00000620204 PIBF1Q8WXW3 757 aa11.84□□□□□ -0.51
TNFAIP3-210ENST00000620204 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 FIBPO43427 364 aa11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 TNNT3P45378 269 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 THUMPD2Q9BTF0 503 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 UPF3BQ9BZI7 483 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 NOS1P29475 1434 aa11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 NEO1Q92859 1461 aa11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 GADD45BO75293 160 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 V9GYY5 206 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 ATP10AO60312 1499 aa11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 PIK3C2GO75747 1445 aa11.83□□□□□ -0.52
TNFAIP3-210ENST00000620204 GCC1Q96CN9 775 aa11.82□□□□□ -0.52
TNFAIP3-210ENST00000620204 CERS3Q8IU89 383 aa11.82□□□□□ -0.52
TNFAIP3-210ENST00000620204 MINK1Q8N4C8 1332 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-210ENST00000620204 ASXL1Q8IXJ9 1541 aa11.82□□□□□ -0.52
TNFAIP3-210ENST00000620204 VGFO15240 615 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-210ENST00000620204 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-210ENST00000620204 OTUD7AQ8TE49 926 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-210ENST00000620204 ARAP3Q8WWN8 1544 aa11.82□□□□□ -0.52
TNFAIP3-210ENST00000620204 IBTKQ9P2D0 1353 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-210ENST00000620204 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
TNFAIP3-210ENST00000620204 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
TNFAIP3-210ENST00000620204 TMPOP42166 694 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-210ENST00000620204 AEBP2Q6ZN18 517 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-210ENST00000620204 NPATQ14207 1427 aa11.81□□□□□ -0.52
TNFAIP3-210ENST00000620204 REC8O95072 547 aa11.81□□□□□ -0.52
TNFAIP3-210ENST00000620204 NAA30Q147X3 362 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-210ENST00000620204 RILPL2Q969X0 211 aa11.81□□□□□ -0.52
TNFAIP3-210ENST00000620204 GGNBP2Q9H3C7 697 aa11.81□□□□□ -0.52
TNFAIP3-210ENST00000620204 TMEM51Q9NW97 253 aa11.81□□□□□ -0.52
TNFAIP3-210ENST00000620204 KIDINS220Q9ULH0 1771 aa11.8□□□□□ -0.52
TNFAIP3-210ENST00000620204 GIMAP6Q6P9H5 292 aa11.8□□□□□ -0.52
TNFAIP3-210ENST00000620204 HECW2Q9P2P5 1572 aa11.8□□□□□ -0.52
TNFAIP3-210ENST00000620204 KDM5DQ9BY66 1539 aa11.8□□□□□ -0.52
TNFAIP3-210ENST00000620204 GOLGA6L6A8MZA4 724 aa11.8□□□□□ -0.52
TNFAIP3-210ENST00000620204 TMX3Q96JJ7 454 aa11.8□□□□□ -0.52
TNFAIP3-210ENST00000620204 ZDHHC9Q9Y397 364 aa11.8□□□□□ -0.52
TNFAIP3-210ENST00000620204 NCOA3Q9Y6Q9 1424 aa11.8□□□□□ -0.52
TNFAIP3-210ENST00000620204 TSHZ3Q63HK5 1081 aa11.79□□□□□ -0.52
TNFAIP3-210ENST00000620204 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
TNFAIP3-210ENST00000620204 MLH3Q9UHC1 1453 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms