RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 FOXD4L3Q6VB84 417 aaPredicted RBP17.97■□□□□ 0.47
SYNRG-225ENST00000619541 C1orf115Q9H7X2 142 aa17.97■□□□□ 0.47
SYNRG-225ENST00000619541 SBNO2Q9Y2G9 1366 aa17.97■□□□□ 0.47
SYNRG-225ENST00000619541 U2SURPO15042 1029 aaKnown RBP17.97■□□□□ 0.47
SYNRG-225ENST00000619541 DDIT3P35638 169 aa17.97■□□□□ 0.47
SYNRG-225ENST00000619541 TMEM57Q8N5G2 664 aa17.97■□□□□ 0.47
SYNRG-225ENST00000619541 NOB1Q9ULX3 412 aaKnown RBP17.97■□□□□ 0.47
SYNRG-225ENST00000619541 SYCE3A1L190 88 aa17.96■□□□□ 0.47
SYNRG-225ENST00000619541 DYNC1I1O14576 645 aa17.96■□□□□ 0.47
SYNRG-225ENST00000619541 ZKSCAN5Q9Y2L8 839 aa17.96■□□□□ 0.47
SYNRG-225ENST00000619541 VIRMAQ69YN4 1812 aaKnown RBP17.96■□□□□ 0.47
SYNRG-225ENST00000619541 MYO5BQ9ULV0 1848 aa17.96■□□□□ 0.47
SYNRG-225ENST00000619541 SASS6Q6UVJ0 657 aa17.95■□□□□ 0.46
SYNRG-225ENST00000619541 KIF13AQ9H1H9 1805 aa17.95■□□□□ 0.46
SYNRG-225ENST00000619541 MTERF4Q7Z6M4 381 aaKnown RBP17.95■□□□□ 0.46
SYNRG-225ENST00000619541 SSH1Q8WYL5 1049 aa17.95■□□□□ 0.46
SYNRG-225ENST00000619541 CABP2Q9NPB3 220 aa17.94■□□□□ 0.46
SYNRG-225ENST00000619541 MTHFSP49914 203 aa17.94■□□□□ 0.46
SYNRG-225ENST00000619541 PKP1Q13835 747 aa17.94■□□□□ 0.46
SYNRG-225ENST00000619541 CHD1LQ86WJ1 897 aa17.94■□□□□ 0.46
SYNRG-225ENST00000619541 TMEM131LA2VDJ0 1609 aa17.94■□□□□ 0.46
SYNRG-225ENST00000619541 TERF1P54274 439 aa17.94■□□□□ 0.46
SYNRG-225ENST00000619541 PLCB2Q00722 1185 aa17.94■□□□□ 0.46
SYNRG-225ENST00000619541 CFAP53Q96M91 514 aa17.94■□□□□ 0.46
SYNRG-225ENST00000619541 MYO3AQ8NEV4 1616 aa17.93■□□□□ 0.46
SYNRG-225ENST00000619541 WDR63Q8IWG1 891 aa17.93■□□□□ 0.46
SYNRG-225ENST00000619541 IGSF3O75054 1194 aa17.92■□□□□ 0.46
SYNRG-225ENST00000619541 ATF7IPQ6VMQ6 1270 aa17.92■□□□□ 0.46
SYNRG-225ENST00000619541 TBC1D9Q6ZT07 1266 aa17.92■□□□□ 0.46
SYNRG-225ENST00000619541 AGLP35573 1532 aa17.92■□□□□ 0.46
SYNRG-225ENST00000619541 ZNF500O60304 480 aaPredicted RBP17.92■□□□□ 0.46
SYNRG-225ENST00000619541 CCDC39Q9UFE4 941 aa17.92■□□□□ 0.46
SYNRG-225ENST00000619541 HDAC1Q13547 482 aaPredicted RBP17.92■□□□□ 0.46
SYNRG-225ENST00000619541 ZNF830Q96NB3 372 aaPredicted RBP17.92■□□□□ 0.46
SYNRG-225ENST00000619541 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.91■□□□□ 0.46
SYNRG-225ENST00000619541 CLTCQ00610 1675 aaKnown RBP17.91■□□□□ 0.46
SYNRG-225ENST00000619541 QRICH2Q9H0J4 1663 aa17.91■□□□□ 0.46
SYNRG-225ENST00000619541 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
SYNRG-225ENST00000619541 ZFYVE9O95405 1425 aa17.91■□□□□ 0.46
SYNRG-225ENST00000619541 NPC1L1Q9UHC9 1359 aa17.9■□□□□ 0.46
SYNRG-225ENST00000619541 KIF16BQ96L93 1317 aa17.9■□□□□ 0.46
SYNRG-225ENST00000619541 APBB1O00213 710 aa17.9■□□□□ 0.46
SYNRG-225ENST00000619541 KIF2CQ99661 725 aa17.9■□□□□ 0.46
SYNRG-225ENST00000619541 NSD3Q9BZ95 1437 aa17.9■□□□□ 0.46
SYNRG-225ENST00000619541 MINK1Q8N4C8 1332 aaPredicted RBP17.9■□□□□ 0.46
SYNRG-225ENST00000619541 PRAM1Q96QH2 718 aa17.9■□□□□ 0.46
SYNRG-225ENST00000619541 CCDC94Q9BW85 323 aaPredicted RBP17.9■□□□□ 0.46
SYNRG-225ENST00000619541 ESF1Q9H501 851 aaKnown RBP17.9■□□□□ 0.46
SYNRG-225ENST00000619541 SPDYE4A6NLX3 237 aa17.89■□□□□ 0.46
SYNRG-225ENST00000619541 NUCB2P80303 420 aa17.89■□□□□ 0.46
SYNRG-225ENST00000619541 EVC2Q86UK5 1308 aa17.89■□□□□ 0.45
SYNRG-225ENST00000619541 ZNF445P59923 1031 aa17.89■□□□□ 0.45
SYNRG-225ENST00000619541 REREQ9P2R6 1566 aa17.89■□□□□ 0.45
SYNRG-225ENST00000619541 ZMYM3Q14202 1370 aa17.89■□□□□ 0.45
SYNRG-225ENST00000619541 NUCB1Q02818 461 aa17.88■□□□□ 0.45
SYNRG-225ENST00000619541 KIAA2012Q0VF49 1180 aa17.88■□□□□ 0.45
SYNRG-225ENST00000619541 NOL8Q76FK4 1167 aaKnown RBP17.88■□□□□ 0.45
SYNRG-225ENST00000619541 LMBRD1Q9NUN5 540 aa17.88■□□□□ 0.45
SYNRG-225ENST00000619541 HS1BP3Q53T59 392 aa17.88■□□□□ 0.45
SYNRG-225ENST00000619541 FGD1P98174 961 aa17.88■□□□□ 0.45
SYNRG-225ENST00000619541 BBXQ8WY36 941 aaPredicted RBP17.87■□□□□ 0.45
SYNRG-225ENST00000619541 NCOA3Q9Y6Q9 1424 aa17.87■□□□□ 0.45
SYNRG-225ENST00000619541 C17orf53Q8N3J3 647 aaPredicted RBP17.87■□□□□ 0.45
SYNRG-225ENST00000619541 SRPK2P78362 688 aaKnown RBP17.87■□□□□ 0.45
SYNRG-225ENST00000619541 ZGPATQ8N5A5 531 aaKnown RBP17.86■□□□□ 0.45
SYNRG-225ENST00000619541 TULP4Q9NRJ4 1543 aa17.86■□□□□ 0.45
SYNRG-225ENST00000619541 PPP4R3BQ5MIZ7 849 aa17.86■□□□□ 0.45
SYNRG-225ENST00000619541 ELL2O00472 640 aaPredicted RBP17.86■□□□□ 0.45
SYNRG-225ENST00000619541 ARHGEF40Q8TER5 1519 aa17.85■□□□□ 0.45
SYNRG-225ENST00000619541 BMP2KLQ5H9B9 411 aa17.85■□□□□ 0.45
SYNRG-225ENST00000619541 ARHGEF28Q8N1W1 1705 aaKnown RBP17.85■□□□□ 0.45
SYNRG-225ENST00000619541 IPO8O15397 1037 aaKnown RBP17.85■□□□□ 0.45
SYNRG-225ENST00000619541 A2ML1A8K2U0 1454 aa17.85■□□□□ 0.45
SYNRG-225ENST00000619541 GPT2Q8TD30 523 aa17.85■□□□□ 0.45
SYNRG-225ENST00000619541 YTHDC2Q9H6S0 1430 aaKnown RBP17.84■□□□□ 0.45
SYNRG-225ENST00000619541 DMTNQ08495 405 aa17.84■□□□□ 0.45
SYNRG-225ENST00000619541 TMEM63CQ9P1W3 806 aa17.84■□□□□ 0.45
SYNRG-225ENST00000619541 WAPLQ7Z5K2 1190 aa17.84■□□□□ 0.45
SYNRG-225ENST00000619541 ZBTB40Q9NUA8 1239 aa17.84■□□□□ 0.45
SYNRG-225ENST00000619541 NSFL1CQ9UNZ2 370 aaKnown RBP17.84■□□□□ 0.45
SYNRG-225ENST00000619541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.84■□□□□ 0.45
SYNRG-225ENST00000619541 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.44
SYNRG-225ENST00000619541 PDLIM2Q96JY6 352 aa17.83■□□□□ 0.44
SYNRG-225ENST00000619541 BCL11BQ9C0K0 894 aaPredicted RBP17.83■□□□□ 0.44
SYNRG-225ENST00000619541 RIMS2Q9UQ26 1411 aa17.82■□□□□ 0.44
SYNRG-225ENST00000619541 CDC45O75419 566 aa17.82■□□□□ 0.44
SYNRG-225ENST00000619541 LRSAM1Q6UWE0 723 aa17.82■□□□□ 0.44
SYNRG-225ENST00000619541 AK9Q5TCS8 1911 aa17.82■□□□□ 0.44
SYNRG-225ENST00000619541 ZSCAN20P17040 1043 aaPredicted RBP17.82■□□□□ 0.44
SYNRG-225ENST00000619541 PTPRMP28827 1452 aa17.81■□□□□ 0.44
SYNRG-225ENST00000619541 ALKQ9UM73 1620 aa17.81■□□□□ 0.44
SYNRG-225ENST00000619541 SPATA31D1Q6ZQQ2 1576 aa17.81■□□□□ 0.44
SYNRG-225ENST00000619541 CEBPAP49715 358 aaPredicted RBP17.81■□□□□ 0.44
SYNRG-225ENST00000619541 RABEP1Q15276 862 aa17.81■□□□□ 0.44
SYNRG-225ENST00000619541 TTC12Q9H892 705 aaPredicted RBP17.81■□□□□ 0.44
SYNRG-225ENST00000619541 MCM5P33992 734 aa17.8■□□□□ 0.44
SYNRG-225ENST00000619541 POLR3AO14802 1390 aaPredicted RBP17.8■□□□□ 0.44
SYNRG-225ENST00000619541 ST18O60284 1047 aa17.79■□□□□ 0.44
SYNRG-225ENST00000619541 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
SYNRG-225ENST00000619541 TSPY26PQ9H489 355 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms