RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 CEP57L1Q8IYX8 460 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 RUNDC1Q96C34 613 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 CRACR2AQ9BSW2 395 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 GOPCQ9HD26 462 aa7.08□□□□□ -1.28
RFX3-212ENST00000617270 GNL3LQ9NVN8 582 aaKnown RBP7.08□□□□□ -1.28
RFX3-212ENST00000617270 GSTTP1A0A1W2PQM5 241 aa7.07□□□□□ -1.28
RFX3-212ENST00000617270 MAP4K4O95819 1239 aaPredicted RBP7.07□□□□□ -1.28
RFX3-212ENST00000617270 IPO4Q8TEX9 1081 aaKnown RBP7.07□□□□□ -1.28
RFX3-212ENST00000617270 RBM42Q9BTD8 480 aaKnown RBP7.07□□□□□ -1.28
RFX3-212ENST00000617270 KIF6Q6ZMV9 814 aa7.07□□□□□ -1.28
RFX3-212ENST00000617270 PRDM10Q9NQV6 1147 aa7.07□□□□□ -1.28
RFX3-212ENST00000617270 COMMD10Q9Y6G5 202 aa7.07□□□□□ -1.28
RFX3-212ENST00000617270 SIL1Q9H173 461 aa7.07□□□□□ -1.28
RFX3-212ENST00000617270 CYP46A1Q9Y6A2 500 aa7.07□□□□□ -1.28
RFX3-212ENST00000617270 UACAQ9BZF9 1416 aa7.07□□□□□ -1.28
RFX3-212ENST00000617270 DHX8Q14562 1220 aaKnown RBP7.07□□□□□ -1.28
RFX3-212ENST00000617270 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.07□□□□□ -1.28
RFX3-212ENST00000617270 CTNNBL1Q8WYA6 563 aaPredicted RBP7.07□□□□□ -1.28
RFX3-212ENST00000617270 SCLT1Q96NL6 688 aa7.07□□□□□ -1.28
RFX3-212ENST00000617270 VPS8Q8N3P4 1428 aa7.07□□□□□ -1.28
RFX3-212ENST00000617270 ZNF76P36508 570 aa7.07□□□□□ -1.28
RFX3-212ENST00000617270 UPF3BQ9BZI7 483 aaKnown RBP7.07□□□□□ -1.28
RFX3-212ENST00000617270 NACAP1Q9BZK3 213 aa7.07□□□□□ -1.28
RFX3-212ENST00000617270 HIP1O00291 1037 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 RNF187Q5TA31 235 aaPredicted RBP7.06□□□□□ -1.28
RFX3-212ENST00000617270 RSPH4AQ5TD94 716 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 SPATA32Q96LK8 384 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 TRERF1Q96PN7 1200 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 BMP2KQ9NSY1 1161 aaPredicted RBP7.06□□□□□ -1.28
RFX3-212ENST00000617270 IFFO1Q0D2I5 559 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 CCDC158Q5M9N0 1113 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 CCDC148Q8NFR7 591 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 NOL7Q9UMY1 257 aaKnown RBP7.06□□□□□ -1.28
RFX3-212ENST00000617270 UBXN4Q92575 508 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 VGFO15240 615 aaPredicted RBP7.06□□□□□ -1.28
RFX3-212ENST00000617270 SMC1AQ14683 1233 aaKnown RBP7.06□□□□□ -1.28
RFX3-212ENST00000617270 CCDC57Q2TAC2 916 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 ERC1Q8IUD2 1116 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 POTEJP0CG39 1038 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 CCDC178Q5BJE1 867 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 LUZP1Q86V48 1076 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 TRIM21P19474 475 aaKnown RBP7.06□□□□□ -1.28
RFX3-212ENST00000617270 KRT85P78386 507 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 SPATA24Q86W54 205 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 PDCL2Q8N4E4 241 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 PPM1EQ8WY54 764 aa7.06□□□□□ -1.28
RFX3-212ENST00000617270 DDX23Q9BUQ8 820 aaKnown RBP7.06□□□□□ -1.28
RFX3-212ENST00000617270 SPINK5Q9NQ38 1064 aaPredicted RBP7.06□□□□□ -1.28
RFX3-212ENST00000617270 GPATCH11Q8N954 259 aa7.05□□□□□ -1.28
RFX3-212ENST00000617270 GRIPAP1Q4V328 841 aa7.05□□□□□ -1.28
RFX3-212ENST00000617270 LARP1BQ659C4 914 aaKnown RBP7.05□□□□□ -1.28
RFX3-212ENST00000617270 TTC16Q8NEE8 873 aa7.05□□□□□ -1.28
RFX3-212ENST00000617270 CFAP100Q494V2 611 aa7.05□□□□□ -1.28
RFX3-212ENST00000617270 ZFP91Q96JP5 570 aaPredicted RBP7.05□□□□□ -1.28
RFX3-212ENST00000617270 GNAI3P08754 354 aa7.05□□□□□ -1.28
RFX3-212ENST00000617270 TNNT1P13805 278 aa7.05□□□□□ -1.28
RFX3-212ENST00000617270 CAMK4Q16566 473 aa7.05□□□□□ -1.28
RFX3-212ENST00000617270 USP5P45974 858 aa7.05□□□□□ -1.28
RFX3-212ENST00000617270 MCM2P49736 904 aa7.05□□□□□ -1.28
RFX3-212ENST00000617270 GRPEL1Q9HAV7 217 aa7.05□□□□□ -1.28
RFX3-212ENST00000617270 CETN2P41208 172 aa7.05□□□□□ -1.28
RFX3-212ENST00000617270 SPA17Q15506 151 aa7.04□□□□□ -1.28
RFX3-212ENST00000617270 SOGA1O94964 1423 aa7.04□□□□□ -1.28
RFX3-212ENST00000617270 WDR33Q9C0J8 1336 aaKnown RBP7.04□□□□□ -1.28
RFX3-212ENST00000617270 PPP1R12BO60237 982 aaPredicted RBP7.04□□□□□ -1.28
RFX3-212ENST00000617270 UBA5Q9GZZ9 404 aa7.04□□□□□ -1.28
RFX3-212ENST00000617270 ZSCAN29Q8IWY8 852 aaPredicted RBP7.04□□□□□ -1.28
RFX3-212ENST00000617270 UBAC1Q9BSL1 405 aa7.04□□□□□ -1.28
RFX3-212ENST00000617270 NUP62CLQ9H1M0 184 aa7.04□□□□□ -1.28
RFX3-212ENST00000617270 HOOK3Q86VS8 718 aa7.04□□□□□ -1.28
RFX3-212ENST00000617270 ZNF397Q8NF99 534 aaPredicted RBP7.04□□□□□ -1.28
RFX3-212ENST00000617270 TMX1Q9H3N1 280 aa7.04□□□□□ -1.28
RFX3-212ENST00000617270 GGNBP2Q9H3C7 697 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 CDKL5O76039 1030 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 TDO2P48775 406 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 CCDC30Q5VVM6 783 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 SPDYE4A6NLX3 237 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 CBX1P83916 185 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 FKBP4Q02790 459 aaKnown RBP eCLIP7.03□□□□□ -1.28
RFX3-212ENST00000617270 ANKRD1Q15327 319 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 RAI14Q9P0K7 980 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 CCDC175P0C221 793 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 ATF3P18847 181 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 PDZRN3Q9UPQ7 1066 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 TMCO5BA8MYB1 307 aa7.03□□□□□ -1.28
RFX3-212ENST00000617270 POLR3GO15318 223 aaPredicted RBP7.03□□□□□ -1.28
RFX3-212ENST00000617270 SFPQP23246 707 aaKnown RBP eCLIP7.03□□□□□ -1.282e-6■■■□□ 15.1
RFX3-212ENST00000617270 GCOM1H8Y6P7 765 aaPredicted RBP7.02□□□□□ -1.28
RFX3-212ENST00000617270 MYZAPP0CAP1 466 aa7.02□□□□□ -1.28
RFX3-212ENST00000617270 KLHL10Q6JEL2 608 aa7.02□□□□□ -1.29
RFX3-212ENST00000617270 FAM107BQ9H098 131 aa7.02□□□□□ -1.29
RFX3-212ENST00000617270 MYCNP04198 464 aaPredicted RBP7.02□□□□□ -1.29
RFX3-212ENST00000617270 CTNNA2P26232 953 aa7.02□□□□□ -1.29
RFX3-212ENST00000617270 LARP1Q6PKG0 1096 aaKnown RBP7.02□□□□□ -1.29
RFX3-212ENST00000617270 CGNQ9P2M7 1197 aaKnown RBP7.02□□□□□ -1.29
RFX3-212ENST00000617270 GBP3Q9H0R5 595 aa7.02□□□□□ -1.29
RFX3-212ENST00000617270 STRN4Q9NRL3 753 aa7.02□□□□□ -1.29
RFX3-212ENST00000617270 PDRG1Q9NUG6 133 aa7.02□□□□□ -1.29
RFX3-212ENST00000617270 IMMTQ16891 758 aaKnown RBP7.02□□□□□ -1.29
RFX3-212ENST00000617270 MAP9Q49MG5 647 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms