RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 PIK3C2AO00443 1686 aa20.23■□□□□ 0.83
NR1H3-235ENST00000616973 ZKSCAN2Q63HK3 967 aa20.22■□□□□ 0.83
NR1H3-235ENST00000616973 KCNA6P17658 529 aa20.21■□□□□ 0.83
NR1H3-235ENST00000616973 ANKLE2Q86XL3 938 aa20.21■□□□□ 0.83
NR1H3-235ENST00000616973 RLBP1P12271 317 aa20.21■□□□□ 0.83
NR1H3-235ENST00000616973 LMOD3Q0VAK6 560 aa20.21■□□□□ 0.83
NR1H3-235ENST00000616973 ZNF428Q96B54 188 aa20.21■□□□□ 0.83
NR1H3-235ENST00000616973 BCL2L13Q9BXK5 485 aa20.21■□□□□ 0.83
NR1H3-235ENST00000616973 MARF1Q9Y4F3 1742 aaKnown RBP20.2■□□□□ 0.82
NR1H3-235ENST00000616973 ANP32EQ9BTT0 268 aa20.2■□□□□ 0.82
NR1H3-235ENST00000616973 EIF4A2Q14240 407 aaKnown RBP20.19■□□□□ 0.82
NR1H3-235ENST00000616973 ALDH1L2Q3SY69 923 aa20.19■□□□□ 0.82
NR1H3-235ENST00000616973 SMC4Q9NTJ3 1288 aa20.19■□□□□ 0.82
NR1H3-235ENST00000616973 ANP32AP39687 249 aaKnown RBP20.18■□□□□ 0.82
NR1H3-235ENST00000616973 NGDNQ8NEJ9 315 aaKnown RBP20.18■□□□□ 0.82
NR1H3-235ENST00000616973 PMFBP1Q8TBY8 1022 aa20.18■□□□□ 0.82
NR1H3-235ENST00000616973 SSH1Q8WYL5 1049 aa20.18■□□□□ 0.82
NR1H3-235ENST00000616973 IFT57Q9NWB7 429 aa20.18■□□□□ 0.82
NR1H3-235ENST00000616973 IGHDP01880 384 aa20.17■□□□□ 0.82
NR1H3-235ENST00000616973 GNAI1P63096 354 aa20.17■□□□□ 0.82
NR1H3-235ENST00000616973 ZNF853P0CG23 659 aa20.17■□□□□ 0.82
NR1H3-235ENST00000616973 BRPF1P55201 1214 aaPredicted RBP20.17■□□□□ 0.82
NR1H3-235ENST00000616973 MVPQ14764 893 aaKnown RBP20.17■□□□□ 0.82
NR1H3-235ENST00000616973 DZIP1LQ8IYY4 767 aaKnown RBP20.17■□□□□ 0.82
NR1H3-235ENST00000616973 TNNQ9UQP3 1299 aa20.17■□□□□ 0.82
NR1H3-235ENST00000616973 VIRMAQ69YN4 1812 aaKnown RBP20.16■□□□□ 0.82
NR1H3-235ENST00000616973 SKAP1Q86WV1 359 aa20.15■□□□□ 0.82
NR1H3-235ENST00000616973 KIF16BQ96L93 1317 aa20.15■□□□□ 0.82
NR1H3-235ENST00000616973 SBNO1A3KN83 1393 aa20.14■□□□□ 0.82
NR1H3-235ENST00000616973 ATF7IPQ6VMQ6 1270 aa20.14■□□□□ 0.81
NR1H3-235ENST00000616973 FTSJ3Q8IY81 847 aaKnown RBP20.14■□□□□ 0.81
NR1H3-235ENST00000616973 ARHGEF10O15013 1369 aa20.13■□□□□ 0.81
NR1H3-235ENST00000616973 FLT4P35916 1363 aa20.13■□□□□ 0.81
NR1H3-235ENST00000616973 IPO8O15397 1037 aaKnown RBP20.13■□□□□ 0.81
NR1H3-235ENST00000616973 TRIM27P14373 513 aa20.13■□□□□ 0.81
NR1H3-235ENST00000616973 KIF24Q5T7B8 1368 aa20.13■□□□□ 0.81
NR1H3-235ENST00000616973 CFAP44Q96MT7 982 aa20.12■□□□□ 0.81
NR1H3-235ENST00000616973 MAP3K19Q56UN5 1328 aa20.12■□□□□ 0.81
NR1H3-235ENST00000616973 HSP90AB2PQ58FF8 381 aa20.12■□□□□ 0.81
NR1H3-235ENST00000616973 IPO9Q96P70 1041 aaKnown RBP20.12■□□□□ 0.81
NR1H3-235ENST00000616973 SULT6B1Q6IMI4 303 aa20.11■□□□□ 0.81
NR1H3-235ENST00000616973 PCDHB15Q9Y5E8 787 aa20.11■□□□□ 0.81
NR1H3-235ENST00000616973 NOB1Q9ULX3 412 aaKnown RBP20.1■□□□□ 0.81
NR1H3-235ENST00000616973 NPHP4O75161 1426 aaPredicted RBP20.1■□□□□ 0.81
NR1H3-235ENST00000616973 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
NR1H3-235ENST00000616973 AEBP1Q8IUX7 1158 aa20.1■□□□□ 0.81
NR1H3-235ENST00000616973 THUMPD2Q9BTF0 503 aaKnown RBP20.1■□□□□ 0.81
NR1H3-235ENST00000616973 DDX19BQ9UMR2 479 aa20.1■□□□□ 0.81
NR1H3-235ENST00000616973 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
NR1H3-235ENST00000616973 VAMP4O75379 141 aa20.09■□□□□ 0.81
NR1H3-235ENST00000616973 FAM161AQ3B820 660 aa20.09■□□□□ 0.81
NR1H3-235ENST00000616973 MBIPQ9NS73 344 aa20.09■□□□□ 0.81
NR1H3-235ENST00000616973 NWD1Q149M9 1564 aa20.09■□□□□ 0.81
NR1H3-235ENST00000616973 RWDD1Q9H446 243 aaPredicted RBP20.08■□□□□ 0.81
NR1H3-235ENST00000616973 KDRP35968 1356 aa20.08■□□□□ 0.8
NR1H3-235ENST00000616973 ERICH6Q7L0X2 663 aa20.08■□□□□ 0.8
NR1H3-235ENST00000616973 ARHGAP45Q92619 1136 aa20.07■□□□□ 0.8
NR1H3-235ENST00000616973 NLRP6P59044 892 aa20.06■□□□□ 0.8
NR1H3-235ENST00000616973 C8orf34Q49A92 452 aa20.06■□□□□ 0.8
NR1H3-235ENST00000616973 NOP58Q9Y2X3 529 aaKnown RBP20.06■□□□□ 0.8
NR1H3-235ENST00000616973 RGS3P49796 1198 aa20.05■□□□□ 0.8
NR1H3-235ENST00000616973 PHF8Q9UPP1 1060 aa20.05■□□□□ 0.8
NR1H3-235ENST00000616973 LTN1O94822 1766 aa20.05■□□□□ 0.8
NR1H3-235ENST00000616973 IGSF1Q8N6C5 1336 aa20.04■□□□□ 0.8
NR1H3-235ENST00000616973 FAM83GA6ND36 823 aa20.04■□□□□ 0.8
NR1H3-235ENST00000616973 AMPHP49418 695 aa20.04■□□□□ 0.8
NR1H3-235ENST00000616973 MRPL50Q8N5N7 158 aaKnown RBP20.04■□□□□ 0.8
NR1H3-235ENST00000616973 ITPRIPQ8IWB1 547 aa20.04■□□□□ 0.8
NR1H3-235ENST00000616973 TMEM57Q8N5G2 664 aa20.04■□□□□ 0.8
NR1H3-235ENST00000616973 TWISTNBQ3B726 338 aaPredicted RBP20.03■□□□□ 0.8
NR1H3-235ENST00000616973 TSPYL6Q8N831 410 aa20.03■□□□□ 0.8
NR1H3-235ENST00000616973 SOX12O15370 315 aa20.02■□□□□ 0.8
NR1H3-235ENST00000616973 HDAC1Q13547 482 aaPredicted RBP20.02■□□□□ 0.8
NR1H3-235ENST00000616973 RTL1A6NKG5 1358 aa20.02■□□□□ 0.79
NR1H3-235ENST00000616973 PHRF1Q9P1Y6 1649 aaKnown RBP20.01■□□□□ 0.79
NR1H3-235ENST00000616973 ZBTB40Q9NUA8 1239 aa20.01■□□□□ 0.79
NR1H3-235ENST00000616973 KIAA0232Q92628 1395 aa20■□□□□ 0.79
NR1H3-235ENST00000616973 CHL1O00533 1208 aa20■□□□□ 0.79
NR1H3-235ENST00000616973 HAP1P54257 671 aaPredicted RBP20■□□□□ 0.79
NR1H3-235ENST00000616973 DCTN1Q14203 1278 aa20■□□□□ 0.79
NR1H3-235ENST00000616973 ABTB2Q8N961 1025 aa20■□□□□ 0.79
NR1H3-235ENST00000616973 HOXC9P31274 260 aa20■□□□□ 0.79
NR1H3-235ENST00000616973 C8orf58Q8NAV2 365 aa20■□□□□ 0.79
NR1H3-235ENST00000616973 CHMP4BQ9H444 224 aaKnown RBP20■□□□□ 0.79
NR1H3-235ENST00000616973 CRB1P82279 1406 aa19.99■□□□□ 0.79
NR1H3-235ENST00000616973 EYA1Q99502 592 aa19.99■□□□□ 0.79
NR1H3-235ENST00000616973 ZBTB47Q9UFB7 747 aaPredicted RBP19.99■□□□□ 0.79
NR1H3-235ENST00000616973 LRRC37A3O60309 1634 aa19.99■□□□□ 0.79
NR1H3-235ENST00000616973 NFAT5O94916 1531 aa19.99■□□□□ 0.79
NR1H3-235ENST00000616973 NPM2Q86SE8 214 aaKnown RBP19.98■□□□□ 0.79
NR1H3-235ENST00000616973 PDZRN3Q9UPQ7 1066 aa19.98■□□□□ 0.79
NR1H3-235ENST00000616973 ABCC4O15439 1325 aa19.97■□□□□ 0.79
NR1H3-235ENST00000616973 GAS2L2Q8NHY3 880 aa19.96■□□□□ 0.79
NR1H3-235ENST00000616973 HTATSF1O43719 755 aaKnown RBP19.96■□□□□ 0.79
NR1H3-235ENST00000616973 PAK3O75914 559 aaPredicted RBP19.96■□□□□ 0.79
NR1H3-235ENST00000616973 MTHFSDQ2M296 383 aaKnown RBP19.96■□□□□ 0.79
NR1H3-235ENST00000616973 KIF1AQ12756 1690 aa19.95■□□□□ 0.78
NR1H3-235ENST00000616973 ELL2O00472 640 aaPredicted RBP19.95■□□□□ 0.78
NR1H3-235ENST00000616973 MCM10Q7L590 875 aa19.95■□□□□ 0.78
NR1H3-235ENST00000616973 DDRGK1Q96HY6 314 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms