RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 DEKP35659 375 aaKnown RBP18.83■□□□□ 0.61
CDKN1A-208ENST00000615513 CEBPAP49715 358 aaPredicted RBP18.83■□□□□ 0.61
CDKN1A-208ENST00000615513 LMOD3Q0VAK6 560 aa18.83■□□□□ 0.61
CDKN1A-208ENST00000615513 PTCH1Q13635 1447 aa18.83■□□□□ 0.61
CDKN1A-208ENST00000615513 RRS1Q15050 365 aaKnown RBP18.82■□□□□ 0.6
CDKN1A-208ENST00000615513 IFT57Q9NWB7 429 aa18.82■□□□□ 0.6
CDKN1A-208ENST00000615513 NOB1Q9ULX3 412 aaKnown RBP18.82■□□□□ 0.6
CDKN1A-208ENST00000615513 ACEP12821 1306 aa18.82■□□□□ 0.6
CDKN1A-208ENST00000615513 OVOS2A0A0J9YW53 1432 aa18.82■□□□□ 0.6
CDKN1A-208ENST00000615513 USP6P35125 1406 aa18.82■□□□□ 0.6
CDKN1A-208ENST00000615513 OVOS2Q6IE36 1432 aa18.82■□□□□ 0.6
CDKN1A-208ENST00000615513 DIP2AQ14689 1571 aa18.82■□□□□ 0.6
CDKN1A-208ENST00000615513 GNAI1P63096 354 aa18.82■□□□□ 0.6
CDKN1A-208ENST00000615513 THEMISQ8N1K5 641 aaPredicted RBP18.8■□□□□ 0.6
CDKN1A-208ENST00000615513 SLC26A8Q96RN1 970 aa18.8■□□□□ 0.6
CDKN1A-208ENST00000615513 ZNF853P0CG23 659 aa18.8■□□□□ 0.6
CDKN1A-208ENST00000615513 AMOTL2Q9Y2J4 779 aa18.79■□□□□ 0.6
CDKN1A-208ENST00000615513 SSH2Q76I76 1423 aa18.79■□□□□ 0.6
CDKN1A-208ENST00000615513 VIRMAQ69YN4 1812 aaKnown RBP18.79■□□□□ 0.6
CDKN1A-208ENST00000615513 HDAC1Q13547 482 aaPredicted RBP18.79■□□□□ 0.6
CDKN1A-208ENST00000615513 PDZRN3Q9UPQ7 1066 aa18.79■□□□□ 0.6
CDKN1A-208ENST00000615513 USP31Q70CQ4 1352 aa18.78■□□□□ 0.6
CDKN1A-208ENST00000615513 ITPRIPQ8IWB1 547 aa18.78■□□□□ 0.6
CDKN1A-208ENST00000615513 FER1L4A9Z1Z3 1794 aa18.78■□□□□ 0.6
CDKN1A-208ENST00000615513 NBR1Q14596 966 aa18.77■□□□□ 0.6
CDKN1A-208ENST00000615513 TTC21AQ8NDW8 1320 aa18.77■□□□□ 0.6
CDKN1A-208ENST00000615513 NALCNQ8IZF0 1738 aa18.76■□□□□ 0.59
CDKN1A-208ENST00000615513 VAMP4O75379 141 aa18.76■□□□□ 0.59
CDKN1A-208ENST00000615513 ARHGAP45Q92619 1136 aa18.76■□□□□ 0.59
CDKN1A-208ENST00000615513 CFAP44Q96MT7 982 aa18.76■□□□□ 0.59
CDKN1A-208ENST00000615513 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
CDKN1A-208ENST00000615513 TMEM57Q8N5G2 664 aa18.76■□□□□ 0.59
CDKN1A-208ENST00000615513 EIF4A2Q14240 407 aaKnown RBP18.75■□□□□ 0.59
CDKN1A-208ENST00000615513 ZBTB40Q9NUA8 1239 aa18.75■□□□□ 0.59
CDKN1A-208ENST00000615513 THUMPD2Q9BTF0 503 aaKnown RBP18.74■□□□□ 0.59
CDKN1A-208ENST00000615513 MBIPQ9NS73 344 aa18.74■□□□□ 0.59
CDKN1A-208ENST00000615513 CHMP4BQ9H444 224 aaKnown RBP18.73■□□□□ 0.59
CDKN1A-208ENST00000615513 PIK3R4Q99570 1358 aa18.73■□□□□ 0.59
CDKN1A-208ENST00000615513 MRPL50Q8N5N7 158 aaKnown RBP18.73■□□□□ 0.59
CDKN1A-208ENST00000615513 XRN1Q8IZH2 1706 aaKnown RBP18.71■□□□□ 0.59
CDKN1A-208ENST00000615513 NUTM2FA1L443 756 aa18.71■□□□□ 0.59
CDKN1A-208ENST00000615513 SMC5Q8IY18 1101 aa18.71■□□□□ 0.59
CDKN1A-208ENST00000615513 DAXXQ9UER7 740 aaPredicted RBP18.71■□□□□ 0.59
CDKN1A-208ENST00000615513 DLG5Q8TDM6 1919 aa18.71■□□□□ 0.59
CDKN1A-208ENST00000615513 RTL5Q5HYW3 569 aaPredicted RBP18.71■□□□□ 0.59
CDKN1A-208ENST00000615513 USP19O94966 1318 aa18.71■□□□□ 0.59
CDKN1A-208ENST00000615513 ANKARQ7Z5J8 1434 aa18.7■□□□□ 0.58
CDKN1A-208ENST00000615513 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
CDKN1A-208ENST00000615513 TWISTNBQ3B726 338 aaPredicted RBP18.7■□□□□ 0.58
CDKN1A-208ENST00000615513 TSPYL6Q8N831 410 aa18.7■□□□□ 0.58
CDKN1A-208ENST00000615513 DNAJC5Q9H3Z4 198 aa18.7■□□□□ 0.58
CDKN1A-208ENST00000615513 USP35Q9P2H5 1018 aa18.7■□□□□ 0.58
CDKN1A-208ENST00000615513 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
CDKN1A-208ENST00000615513 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
CDKN1A-208ENST00000615513 PEAK1Q9H792 1746 aa18.69■□□□□ 0.58
CDKN1A-208ENST00000615513 HAP1P54257 671 aaPredicted RBP18.68■□□□□ 0.58
CDKN1A-208ENST00000615513 AEBP1Q8IUX7 1158 aa18.68■□□□□ 0.58
CDKN1A-208ENST00000615513 ARHGEF10O15013 1369 aa18.68■□□□□ 0.58
CDKN1A-208ENST00000615513 SBNO1A3KN83 1393 aa18.67■□□□□ 0.58
CDKN1A-208ENST00000615513 FAM83GA6ND36 823 aa18.67■□□□□ 0.58
CDKN1A-208ENST00000615513 HSP90AB2PQ58FF8 381 aa18.67■□□□□ 0.58
CDKN1A-208ENST00000615513 NGDNQ8NEJ9 315 aaKnown RBP18.67■□□□□ 0.58
CDKN1A-208ENST00000615513 ABCC4O15439 1325 aa18.66■□□□□ 0.58
CDKN1A-208ENST00000615513 FLT4P35916 1363 aa18.65■□□□□ 0.58
CDKN1A-208ENST00000615513 C8orf58Q8NAV2 365 aa18.65■□□□□ 0.58
CDKN1A-208ENST00000615513 UPF2Q9HAU5 1272 aaKnown RBP18.65■□□□□ 0.58
CDKN1A-208ENST00000615513 CEP170BQ9Y4F5 1589 aaPredicted RBP18.65■□□□□ 0.58
CDKN1A-208ENST00000615513 MAP3K19Q56UN5 1328 aa18.65■□□□□ 0.58
CDKN1A-208ENST00000615513 ZBTB7BO15156 539 aaPredicted RBP18.65■□□□□ 0.58
CDKN1A-208ENST00000615513 SEC24BO95487 1268 aa18.65■□□□□ 0.58
CDKN1A-208ENST00000615513 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
CDKN1A-208ENST00000615513 API5Q9BZZ5 524 aaKnown RBP18.65■□□□□ 0.58
CDKN1A-208ENST00000615513 KIF24Q5T7B8 1368 aa18.64■□□□□ 0.57
CDKN1A-208ENST00000615513 CHL1O00533 1208 aa18.64■□□□□ 0.57
CDKN1A-208ENST00000615513 DCTN1Q14203 1278 aa18.64■□□□□ 0.57
CDKN1A-208ENST00000615513 KIAA0232Q92628 1395 aa18.63■□□□□ 0.57
CDKN1A-208ENST00000615513 ELL2O00472 640 aaPredicted RBP18.62■□□□□ 0.57
CDKN1A-208ENST00000615513 KDRP35968 1356 aa18.62■□□□□ 0.57
CDKN1A-208ENST00000615513 KCNA6P17658 529 aa18.62■□□□□ 0.57
CDKN1A-208ENST00000615513 NUCB1Q02818 461 aa18.62■□□□□ 0.57
CDKN1A-208ENST00000615513 PIK3C2AO00443 1686 aa18.61■□□□□ 0.57
CDKN1A-208ENST00000615513 SLC4A3P48751 1232 aa18.61■□□□□ 0.57
CDKN1A-208ENST00000615513 TBC1D32Q96NH3 1257 aa18.61■□□□□ 0.57
CDKN1A-208ENST00000615513 FMN2Q9NZ56 1722 aa18.6■□□□□ 0.57
CDKN1A-208ENST00000615513 GCC1Q96CN9 775 aa18.6■□□□□ 0.57
CDKN1A-208ENST00000615513 RGPD8O14715 1765 aaPredicted RBP18.6■□□□□ 0.57
CDKN1A-208ENST00000615513 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
CDKN1A-208ENST00000615513 USP54Q70EL1 1684 aa18.59■□□□□ 0.57
CDKN1A-208ENST00000615513 CRB1P82279 1406 aa18.59■□□□□ 0.57
CDKN1A-208ENST00000615513 BECN1Q14457 450 aa18.58■□□□□ 0.57
CDKN1A-208ENST00000615513 SOX12O15370 315 aa18.58■□□□□ 0.56
CDKN1A-208ENST00000615513 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.56
CDKN1A-208ENST00000615513 AMPHP49418 695 aa18.58■□□□□ 0.56
CDKN1A-208ENST00000615513 MCM10Q7L590 875 aa18.57■□□□□ 0.56
CDKN1A-208ENST00000615513 CHD1LQ86WJ1 897 aa18.57■□□□□ 0.56
CDKN1A-208ENST00000615513 NLRP6P59044 892 aa18.56■□□□□ 0.56
CDKN1A-208ENST00000615513 ANKLE2Q86XL3 938 aa18.56■□□□□ 0.56
CDKN1A-208ENST00000615513 GAS2L2Q8NHY3 880 aa18.56■□□□□ 0.56
CDKN1A-208ENST00000615513 INTS3Q68E01 1043 aaKnown RBP18.55■□□□□ 0.56
CDKN1A-208ENST00000615513 EYA1Q99502 592 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms