RNA–Protein interactions for RNA: ENST00000612233.1

NOP56-219, Transcript of NOP56 ribonucleoprotein, humanhuman

Gene NOP56, Length 2,980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-219ENST00000612233 ROBO2Q9HCK4 1378 aa17.64■□□□□ 0.42
NOP56-219ENST00000612233 IL13P35225 146 aa17.64■□□□□ 0.42
NOP56-219ENST00000612233 MVPQ14764 893 aaKnown RBP17.64■□□□□ 0.42
NOP56-219ENST00000612233 TBX22Q9Y458 520 aa17.64■□□□□ 0.42
NOP56-219ENST00000612233 USP6P35125 1406 aa17.64■□□□□ 0.41
NOP56-219ENST00000612233 PTPRUQ92729 1446 aa17.64■□□□□ 0.41
NOP56-219ENST00000612233 ARHGAP45Q92619 1136 aa17.64■□□□□ 0.41
NOP56-219ENST00000612233 TNNT2P45379 298 aaPredicted RBP17.64■□□□□ 0.41
NOP56-219ENST00000612233 CHMP4BQ9H444 224 aaKnown RBP17.64■□□□□ 0.41
NOP56-219ENST00000612233 TTC21AQ8NDW8 1320 aa17.63■□□□□ 0.41
NOP56-219ENST00000612233 NFE2L2Q16236 605 aa17.63■□□□□ 0.41
NOP56-219ENST00000612233 HDAC1Q13547 482 aaPredicted RBP17.62■□□□□ 0.41
NOP56-219ENST00000612233 SAFB2Q14151 953 aaKnown RBP eCLIP17.62■□□□□ 0.41
NOP56-219ENST00000612233 GLIPR1L2Q4G1C9 344 aa17.62■□□□□ 0.41
NOP56-219ENST00000612233 USP35Q9P2H5 1018 aa17.62■□□□□ 0.41
NOP56-219ENST00000612233 PEAK1Q9H792 1746 aa17.62■□□□□ 0.41
NOP56-219ENST00000612233 MARF1Q9Y4F3 1742 aaKnown RBP17.62■□□□□ 0.41
NOP56-219ENST00000612233 WAPLQ7Z5K2 1190 aa17.62■□□□□ 0.41
NOP56-219ENST00000612233 IFT57Q9NWB7 429 aa17.62■□□□□ 0.41
NOP56-219ENST00000612233 PHRF1Q9P1Y6 1649 aaKnown RBP17.62■□□□□ 0.41
NOP56-219ENST00000612233 ZNF853P0CG23 659 aa17.61■□□□□ 0.41
NOP56-219ENST00000612233 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
NOP56-219ENST00000612233 RWDD1Q9H446 243 aaPredicted RBP17.61■□□□□ 0.41
NOP56-219ENST00000612233 IPO8O15397 1037 aaKnown RBP17.61■□□□□ 0.41
NOP56-219ENST00000612233 NEFMP07197 916 aa17.61■□□□□ 0.41
NOP56-219ENST00000612233 CANXP27824 592 aaKnown RBP17.61■□□□□ 0.41
NOP56-219ENST00000612233 CEP170BQ9Y4F5 1589 aaPredicted RBP17.6■□□□□ 0.41
NOP56-219ENST00000612233 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
NOP56-219ENST00000612233 DZIP1LQ8IYY4 767 aaKnown RBP17.6■□□□□ 0.41
NOP56-219ENST00000612233 COG3Q96JB2 828 aa17.59■□□□□ 0.41
NOP56-219ENST00000612233 RRP7AQ9Y3A4 280 aaKnown RBP17.59■□□□□ 0.41
NOP56-219ENST00000612233 CHD2O14647 1828 aaKnown RBP17.59■□□□□ 0.41
NOP56-219ENST00000612233 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
NOP56-219ENST00000612233 N4BP2Q86UW6 1770 aaPredicted RBP17.59■□□□□ 0.41
NOP56-219ENST00000612233 PRR36Q9H6K5 1346 aa17.58■□□□□ 0.41
NOP56-219ENST00000612233 RIPK4P57078 832 aa17.58■□□□□ 0.41
NOP56-219ENST00000612233 ARHGEF10O15013 1369 aa17.58■□□□□ 0.4
NOP56-219ENST00000612233 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
NOP56-219ENST00000612233 IGHDP01880 384 aa17.58■□□□□ 0.4
NOP56-219ENST00000612233 PIK3C2AO00443 1686 aa17.57■□□□□ 0.4
NOP56-219ENST00000612233 GNAI1P63096 354 aa17.57■□□□□ 0.4
NOP56-219ENST00000612233 ATF7IPQ6VMQ6 1270 aa17.57■□□□□ 0.4
NOP56-219ENST00000612233 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
NOP56-219ENST00000612233 PPM1GO15355 546 aaPredicted RBP17.56■□□□□ 0.4
NOP56-219ENST00000612233 PANK1Q8TE04 598 aa17.56■□□□□ 0.4
NOP56-219ENST00000612233 COG6Q9Y2V7 657 aa17.56■□□□□ 0.4
NOP56-219ENST00000612233 EID1Q9Y6B2 187 aa17.56■□□□□ 0.4
NOP56-219ENST00000612233 EXOSC9Q06265 439 aaKnown RBP17.55■□□□□ 0.4
NOP56-219ENST00000612233 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
NOP56-219ENST00000612233 RLBP1P12271 317 aa17.54■□□□□ 0.4
NOP56-219ENST00000612233 KIAA0232Q92628 1395 aa17.54■□□□□ 0.4
NOP56-219ENST00000612233 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
NOP56-219ENST00000612233 TXNDC2Q86VQ3 553 aa17.54■□□□□ 0.4
NOP56-219ENST00000612233 ADAMTSL3P82987 1691 aa17.53■□□□□ 0.4
NOP56-219ENST00000612233 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
NOP56-219ENST00000612233 KDRP35968 1356 aa17.53■□□□□ 0.4
NOP56-219ENST00000612233 NEUROD2Q15784 382 aa17.52■□□□□ 0.4
NOP56-219ENST00000612233 SSH1Q8WYL5 1049 aa17.52■□□□□ 0.4
NOP56-219ENST00000612233 SMC5Q8IY18 1101 aa17.52■□□□□ 0.4
NOP56-219ENST00000612233 THEMISQ8N1K5 641 aaPredicted RBP17.52■□□□□ 0.4
NOP56-219ENST00000612233 NAP1L5Q96NT1 182 aaPredicted RBP17.52■□□□□ 0.4
NOP56-219ENST00000612233 TRIM27P14373 513 aa17.52■□□□□ 0.39
NOP56-219ENST00000612233 MLECQ14165 292 aa17.52■□□□□ 0.39
NOP56-219ENST00000612233 SMC4Q9NTJ3 1288 aa17.52■□□□□ 0.39
NOP56-219ENST00000612233 PCDHB15Q9Y5E8 787 aa17.52■□□□□ 0.39
NOP56-219ENST00000612233 CFAP44Q96MT7 982 aa17.51■□□□□ 0.39
NOP56-219ENST00000612233 LTKP29376 864 aa17.51■□□□□ 0.39
NOP56-219ENST00000612233 NME9Q86XW9 330 aa17.51■□□□□ 0.39
NOP56-219ENST00000612233 FBXO3Q9UK99 471 aa17.5■□□□□ 0.39
NOP56-219ENST00000612233 SBNO1A3KN83 1393 aa17.5■□□□□ 0.39
NOP56-219ENST00000612233 RGPD8O14715 1765 aaPredicted RBP17.5■□□□□ 0.39
NOP56-219ENST00000612233 LMTK3Q96Q04 1460 aa17.5■□□□□ 0.39
NOP56-219ENST00000612233 NWD1Q149M9 1564 aa17.5■□□□□ 0.39
NOP56-219ENST00000612233 CACNA1FO60840 1977 aa17.5■□□□□ 0.39
NOP56-219ENST00000612233 FTSJ3Q8IY81 847 aaKnown RBP17.5■□□□□ 0.39
NOP56-219ENST00000612233 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
NOP56-219ENST00000612233 SOS1Q07889 1333 aaPredicted RBP17.5■□□□□ 0.39
NOP56-219ENST00000612233 FRAT1Q92837 279 aaPredicted RBP17.49■□□□□ 0.39
NOP56-219ENST00000612233 ABCC4O15439 1325 aa17.49■□□□□ 0.39
NOP56-219ENST00000612233 RTL1A6NKG5 1358 aa17.49■□□□□ 0.39
NOP56-219ENST00000612233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.48■□□□□ 0.39
NOP56-219ENST00000612233 ACEP12821 1306 aa17.48■□□□□ 0.39
NOP56-219ENST00000612233 TSR2Q969E8 191 aaKnown RBP17.48■□□□□ 0.39
NOP56-219ENST00000612233 VAMP4O75379 141 aa17.47■□□□□ 0.39
NOP56-219ENST00000612233 MRPL50Q8N5N7 158 aaKnown RBP17.47■□□□□ 0.39
NOP56-219ENST00000612233 USP19O94966 1318 aa17.47■□□□□ 0.39
NOP56-219ENST00000612233 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
NOP56-219ENST00000612233 FLT4P35916 1363 aa17.47■□□□□ 0.39
NOP56-219ENST00000612233 HTATSF1O43719 755 aaKnown RBP17.46■□□□□ 0.38
NOP56-219ENST00000612233 PDZRN3Q9UPQ7 1066 aa17.45■□□□□ 0.38
NOP56-219ENST00000612233 NOB1Q9ULX3 412 aaKnown RBP17.45■□□□□ 0.38
NOP56-219ENST00000612233 CAMTA1Q9Y6Y1 1673 aa17.44■□□□□ 0.38
NOP56-219ENST00000612233 MST1RQ04912 1400 aa17.44■□□□□ 0.38
NOP56-219ENST00000612233 BABAM1Q9NWV8 329 aa17.44■□□□□ 0.38
NOP56-219ENST00000612233 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
NOP56-219ENST00000612233 API5Q9BZZ5 524 aaKnown RBP17.43■□□□□ 0.38
NOP56-219ENST00000612233 CRB1P82279 1406 aa17.43■□□□□ 0.38
NOP56-219ENST00000612233 FAM208AQ9UK61 1670 aaKnown RBP17.42■□□□□ 0.38
NOP56-219ENST00000612233 EIF4A2Q14240 407 aaKnown RBP17.42■□□□□ 0.38
NOP56-219ENST00000612233 GCC1Q96CN9 775 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms