RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-223ENST00000612130 ABCC4O15439 1325 aa17.04■□□□□ 0.32
UBE2F-223ENST00000612130 ZNF445P59923 1031 aa17.03■□□□□ 0.32
UBE2F-223ENST00000612130 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
UBE2F-223ENST00000612130 RABEP1Q15276 862 aa17.03■□□□□ 0.32
UBE2F-223ENST00000612130 MRPL50Q8N5N7 158 aaKnown RBP17.03■□□□□ 0.32
UBE2F-223ENST00000612130 SIGLEC1Q9BZZ2 1709 aa17.03■□□□□ 0.32
UBE2F-223ENST00000612130 DNAJC5Q9H3Z4 198 aa17.03■□□□□ 0.32
UBE2F-223ENST00000612130 PKNOX2Q96KN3 472 aa17.03■□□□□ 0.32
UBE2F-223ENST00000612130 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
UBE2F-223ENST00000612130 POGZQ7Z3K3 1410 aa17.02■□□□□ 0.32
UBE2F-223ENST00000612130 TERF1P54274 439 aa17.02■□□□□ 0.32
UBE2F-223ENST00000612130 SRPK2P78362 688 aaKnown RBP17.02■□□□□ 0.32
UBE2F-223ENST00000612130 HS1BP3Q53T59 392 aa17.02■□□□□ 0.32
UBE2F-223ENST00000612130 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.32
UBE2F-223ENST00000612130 PTPRMP28827 1452 aa17.02■□□□□ 0.32
UBE2F-223ENST00000612130 NUCB2P80303 420 aa17.02■□□□□ 0.31
UBE2F-223ENST00000612130 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
UBE2F-223ENST00000612130 ASXL2Q76L83 1435 aa17.01■□□□□ 0.31
UBE2F-223ENST00000612130 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
UBE2F-223ENST00000612130 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
UBE2F-223ENST00000612130 OFD1O75665 1012 aa17■□□□□ 0.31
UBE2F-223ENST00000612130 PDZRN4Q6ZMN7 1036 aaPredicted RBP17■□□□□ 0.31
UBE2F-223ENST00000612130 YEATS2Q9ULM3 1422 aa17■□□□□ 0.31
UBE2F-223ENST00000612130 CFAP65Q6ZU64 1925 aaKnown RBP17■□□□□ 0.31
UBE2F-223ENST00000612130 VAMP4O75379 141 aa17■□□□□ 0.31
UBE2F-223ENST00000612130 SIRT2Q8IXJ6 389 aa17■□□□□ 0.31
UBE2F-223ENST00000612130 CYP2E1P05181 493 aaPredicted RBP16.99■□□□□ 0.31
UBE2F-223ENST00000612130 MSNP26038 577 aaKnown RBP16.99■□□□□ 0.31
UBE2F-223ENST00000612130 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
UBE2F-223ENST00000612130 PDCL3Q9H2J4 239 aa16.99■□□□□ 0.31
UBE2F-223ENST00000612130 C1orf115Q9H7X2 142 aa16.99■□□□□ 0.31
UBE2F-223ENST00000612130 NFE2L2Q16236 605 aa16.98■□□□□ 0.31
UBE2F-223ENST00000612130 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
UBE2F-223ENST00000612130 IFT57Q9NWB7 429 aa16.98■□□□□ 0.31
UBE2F-223ENST00000612130 GSPT1P15170 499 aaKnown RBP16.97■□□□□ 0.31
UBE2F-223ENST00000612130 PRKAR2BP31323 418 aa16.97■□□□□ 0.31
UBE2F-223ENST00000612130 GNAI1P63096 354 aa16.97■□□□□ 0.31
UBE2F-223ENST00000612130 GGT6Q6P531 493 aa16.97■□□□□ 0.31
UBE2F-223ENST00000612130 API5Q9BZZ5 524 aaKnown RBP16.97■□□□□ 0.31
UBE2F-223ENST00000612130 ZMYND15Q9H091 742 aa16.97■□□□□ 0.31
UBE2F-223ENST00000612130 CWC22Q9HCG8 908 aaKnown RBP16.97■□□□□ 0.31
UBE2F-223ENST00000612130 SAFB2Q14151 953 aaKnown RBP eCLIP16.96■□□□□ 0.31
UBE2F-223ENST00000612130 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
UBE2F-223ENST00000612130 ZNF853P0CG23 659 aa16.95■□□□□ 0.3
UBE2F-223ENST00000612130 ZSCAN23Q3MJ62 389 aa16.95■□□□□ 0.3
UBE2F-223ENST00000612130 TTC22Q5TAA0 569 aa16.95■□□□□ 0.3
UBE2F-223ENST00000612130 PLEKHM2Q8IWE5 1019 aa16.95■□□□□ 0.3
UBE2F-223ENST00000612130 LMBRD1Q9NUN5 540 aa16.95■□□□□ 0.3
UBE2F-223ENST00000612130 MCTP1Q6DN14 999 aa16.94■□□□□ 0.3
UBE2F-223ENST00000612130 PDLIM2Q96JY6 352 aa16.94■□□□□ 0.3
UBE2F-223ENST00000612130 INTS3Q68E01 1043 aaKnown RBP16.94■□□□□ 0.3
UBE2F-223ENST00000612130 ZNF500O60304 480 aaPredicted RBP16.93■□□□□ 0.3
UBE2F-223ENST00000612130 NUTM2DQ5VT03 806 aaPredicted RBP16.93■□□□□ 0.3
UBE2F-223ENST00000612130 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
UBE2F-223ENST00000612130 YTHDC2Q9H6S0 1430 aaKnown RBP16.93■□□□□ 0.3
UBE2F-223ENST00000612130 DCTPP1Q9H773 170 aa16.93■□□□□ 0.3
UBE2F-223ENST00000612130 ARHGEF40Q8TER5 1519 aa16.93■□□□□ 0.3
UBE2F-223ENST00000612130 CAVIN1Q6NZI2 390 aaKnown RBP16.93■□□□□ 0.3
UBE2F-223ENST00000612130 TSPYL6Q8N831 410 aa16.93■□□□□ 0.3
UBE2F-223ENST00000612130 NOL7Q9UMY1 257 aaKnown RBP16.93■□□□□ 0.3
UBE2F-223ENST00000612130 ATP7BP35670 1465 aa16.92■□□□□ 0.3
UBE2F-223ENST00000612130 ST18O60284 1047 aa16.91■□□□□ 0.3
UBE2F-223ENST00000612130 LMOD3Q0VAK6 560 aa16.91■□□□□ 0.3
UBE2F-223ENST00000612130 MBIPQ9NS73 344 aa16.91■□□□□ 0.3
UBE2F-223ENST00000612130 MINK1Q8N4C8 1332 aaPredicted RBP16.91■□□□□ 0.3
UBE2F-223ENST00000612130 TWISTNBQ3B726 338 aaPredicted RBP16.91■□□□□ 0.3
UBE2F-223ENST00000612130 CASC1Q6TDU7 716 aa16.91■□□□□ 0.3
UBE2F-223ENST00000612130 STK26Q9P289 416 aa16.91■□□□□ 0.3
UBE2F-223ENST00000612130 CDK12Q9NYV4 1490 aaPredicted RBP16.91■□□□□ 0.3
UBE2F-223ENST00000612130 PRAM1Q96QH2 718 aa16.9■□□□□ 0.3
UBE2F-223ENST00000612130 POLKQ9UBT6 870 aa16.9■□□□□ 0.3
UBE2F-223ENST00000612130 ATP10DQ9P241 1426 aa16.9■□□□□ 0.3
UBE2F-223ENST00000612130 MCM5P33992 734 aa16.9■□□□□ 0.3
UBE2F-223ENST00000612130 MAP7D2Q96T17 732 aa16.9■□□□□ 0.3
UBE2F-223ENST00000612130 RBSNQ9H1K0 784 aa16.9■□□□□ 0.3
UBE2F-223ENST00000612130 SLC52A1Q9NWF4 448 aa16.9■□□□□ 0.3
UBE2F-223ENST00000612130 TMEM131LA2VDJ0 1609 aa16.89■□□□□ 0.29
UBE2F-223ENST00000612130 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
UBE2F-223ENST00000612130 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
UBE2F-223ENST00000612130 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
UBE2F-223ENST00000612130 RIMS2Q9UQ26 1411 aa16.88■□□□□ 0.29
UBE2F-223ENST00000612130 NCLP19338 710 aaKnown RBP16.88■□□□□ 0.29
UBE2F-223ENST00000612130 ANKRD44Q8N8A2 993 aa16.88■□□□□ 0.29
UBE2F-223ENST00000612130 AK9Q5TCS8 1911 aa16.87■□□□□ 0.29
UBE2F-223ENST00000612130 REC8O95072 547 aa16.87■□□□□ 0.29
UBE2F-223ENST00000612130 IDI1Q13907 227 aa16.87■□□□□ 0.29
UBE2F-223ENST00000612130 CSPP1Q1MSJ5 1256 aa16.87■□□□□ 0.29
UBE2F-223ENST00000612130 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
UBE2F-223ENST00000612130 PRIM1P49642 420 aaKnown RBP16.86■□□□□ 0.29
UBE2F-223ENST00000612130 PKP1Q13835 747 aa16.86■□□□□ 0.29
UBE2F-223ENST00000612130 LRSAM1Q6UWE0 723 aa16.86■□□□□ 0.29
UBE2F-223ENST00000612130 RPAP2Q8IXW5 612 aaPredicted RBP16.86■□□□□ 0.29
UBE2F-223ENST00000612130 GPT2Q8TD30 523 aa16.86■□□□□ 0.29
UBE2F-223ENST00000612130 CDK19Q9BWU1 502 aa16.86■□□□□ 0.29
UBE2F-223ENST00000612130 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
UBE2F-223ENST00000612130 ZKSCAN5Q9Y2L8 839 aa16.86■□□□□ 0.29
UBE2F-223ENST00000612130 DIP2CQ9Y2E4 1556 aa16.86■□□□□ 0.29
UBE2F-223ENST00000612130 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
UBE2F-223ENST00000612130 HMOX1P09601 288 aa16.85■□□□□ 0.29
UBE2F-223ENST00000612130 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms