RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 THUMPD2Q9BTF0 503 aaKnown RBP21.85■■□□□ 1.09
NEK3-206ENST00000611833 ROBO2Q9HCK4 1378 aa21.85■■□□□ 1.09
NEK3-206ENST00000611833 RRS1Q15050 365 aaKnown RBP21.84■■□□□ 1.09
NEK3-206ENST00000611833 ADAMTS13Q76LX8 1427 aa21.83■■□□□ 1.09
NEK3-206ENST00000611833 CALD1Q05682 793 aaKnown RBP21.81■■□□□ 1.08
NEK3-206ENST00000611833 ZBTB40Q9NUA8 1239 aa21.81■■□□□ 1.08
NEK3-206ENST00000611833 GSE1Q14687 1217 aa21.81■■□□□ 1.08
NEK3-206ENST00000611833 TBC1D32Q96NH3 1257 aa21.81■■□□□ 1.08
NEK3-206ENST00000611833 ZNF692Q9BU19 519 aaPredicted RBP21.81■■□□□ 1.08
NEK3-206ENST00000611833 ZNF428Q96B54 188 aa21.8■■□□□ 1.08
NEK3-206ENST00000611833 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.79■■□□□ 1.08
NEK3-206ENST00000611833 DLG5Q8TDM6 1919 aa21.79■■□□□ 1.08
NEK3-206ENST00000611833 FRAT2O75474 233 aaPredicted RBP21.79■■□□□ 1.08
NEK3-206ENST00000611833 BRPF1P55201 1214 aaPredicted RBP21.79■■□□□ 1.08
NEK3-206ENST00000611833 VAMP4O75379 141 aa21.78■■□□□ 1.08
NEK3-206ENST00000611833 LTKP29376 864 aa21.78■■□□□ 1.08
NEK3-206ENST00000611833 IFT57Q9NWB7 429 aa21.78■■□□□ 1.08
NEK3-206ENST00000611833 ZNF853P0CG23 659 aa21.78■■□□□ 1.08
NEK3-206ENST00000611833 SMC5Q8IY18 1101 aa21.78■■□□□ 1.08
NEK3-206ENST00000611833 TSPYL6Q8N831 410 aa21.78■■□□□ 1.08
NEK3-206ENST00000611833 GNAI1P63096 354 aa21.77■■□□□ 1.08
NEK3-206ENST00000611833 NRKQ7Z2Y5 1582 aa21.77■■□□□ 1.07
NEK3-206ENST00000611833 MBIPQ9NS73 344 aa21.77■■□□□ 1.07
NEK3-206ENST00000611833 PLEKHG1Q9ULL1 1385 aa21.76■■□□□ 1.07
NEK3-206ENST00000611833 TOPAZ1Q8N9V7 1692 aa21.76■■□□□ 1.07
NEK3-206ENST00000611833 MRPL50Q8N5N7 158 aaKnown RBP21.74■■□□□ 1.07
NEK3-206ENST00000611833 TTC21BQ7Z4L5 1316 aa21.74■■□□□ 1.07
NEK3-206ENST00000611833 NUTM2FA1L443 756 aa21.74■■□□□ 1.07
NEK3-206ENST00000611833 SLKQ9H2G2 1235 aaPredicted RBP21.74■■□□□ 1.07
NEK3-206ENST00000611833 ACEP12821 1306 aa21.74■■□□□ 1.07
NEK3-206ENST00000611833 FAM83GA6ND36 823 aa21.73■■□□□ 1.07
NEK3-206ENST00000611833 ELL2O00472 640 aaPredicted RBP21.73■■□□□ 1.07
NEK3-206ENST00000611833 LMOD3Q0VAK6 560 aa21.73■■□□□ 1.07
NEK3-206ENST00000611833 CFAP44Q96MT7 982 aa21.73■■□□□ 1.07
NEK3-206ENST00000611833 CEBPAP49715 358 aaPredicted RBP21.72■■□□□ 1.07
NEK3-206ENST00000611833 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
NEK3-206ENST00000611833 CHMP4BQ9H444 224 aaKnown RBP21.72■■□□□ 1.07
NEK3-206ENST00000611833 PTPRUQ92729 1446 aa21.72■■□□□ 1.07
NEK3-206ENST00000611833 MFAP1P55081 439 aaKnown RBP21.72■■□□□ 1.07
NEK3-206ENST00000611833 OVOS2A0A0J9YW53 1432 aa21.71■■□□□ 1.07
NEK3-206ENST00000611833 OVOS2Q6IE36 1432 aa21.71■■□□□ 1.07
NEK3-206ENST00000611833 ARHGAP45Q92619 1136 aa21.71■■□□□ 1.07
NEK3-206ENST00000611833 SLC26A8Q96RN1 970 aa21.71■■□□□ 1.07
NEK3-206ENST00000611833 PLEKHG3A1L390 1219 aa21.71■■□□□ 1.07
NEK3-206ENST00000611833 EIF4A2Q14240 407 aaKnown RBP21.71■■□□□ 1.07
NEK3-206ENST00000611833 TWISTNBQ3B726 338 aaPredicted RBP21.71■■□□□ 1.07
NEK3-206ENST00000611833 TBC1D2Q9BYX2 928 aa21.71■■□□□ 1.07
NEK3-206ENST00000611833 C22orf23Q9BZE7 217 aa21.71■■□□□ 1.07
NEK3-206ENST00000611833 NUCB1Q02818 461 aa21.7■■□□□ 1.06
NEK3-206ENST00000611833 DCTN1Q14203 1278 aa21.7■■□□□ 1.06
NEK3-206ENST00000611833 AEBP1Q8IUX7 1158 aa21.7■■□□□ 1.06
NEK3-206ENST00000611833 PIK3R4Q99570 1358 aa21.7■■□□□ 1.06
NEK3-206ENST00000611833 USP6P35125 1406 aa21.7■■□□□ 1.06
NEK3-206ENST00000611833 ZBTB7BO15156 539 aaPredicted RBP21.69■■□□□ 1.06
NEK3-206ENST00000611833 C8orf58Q8NAV2 365 aa21.69■■□□□ 1.06
NEK3-206ENST00000611833 LNPKQ9C0E8 428 aa21.68■■□□□ 1.06
NEK3-206ENST00000611833 NALCNQ8IZF0 1738 aa21.67■■□□□ 1.06
NEK3-206ENST00000611833 SULT6B1Q6IMI4 303 aa21.67■■□□□ 1.06
NEK3-206ENST00000611833 CHD1LQ86WJ1 897 aa21.67■■□□□ 1.06
NEK3-206ENST00000611833 PEAK1Q9H792 1746 aa21.66■■□□□ 1.06
NEK3-206ENST00000611833 ABCC4O15439 1325 aa21.66■■□□□ 1.06
NEK3-206ENST00000611833 HSP90AB2PQ58FF8 381 aa21.64■■□□□ 1.06
NEK3-206ENST00000611833 ANTXR1Q9H6X2 564 aa21.64■■□□□ 1.06
NEK3-206ENST00000611833 C1orf115Q9H7X2 142 aa21.64■■□□□ 1.06
NEK3-206ENST00000611833 EID1Q9Y6B2 187 aa21.64■■□□□ 1.06
NEK3-206ENST00000611833 SSH2Q76I76 1423 aa21.64■■□□□ 1.05
NEK3-206ENST00000611833 USP31Q70CQ4 1352 aa21.64■■□□□ 1.05
NEK3-206ENST00000611833 ANKRD45Q5TZF3 282 aa21.63■■□□□ 1.05
NEK3-206ENST00000611833 GCC1Q96CN9 775 aa21.63■■□□□ 1.05
NEK3-206ENST00000611833 AMOTL2Q9Y2J4 779 aa21.63■■□□□ 1.05
NEK3-206ENST00000611833 SLIT1O75093 1534 aa21.63■■□□□ 1.05
NEK3-206ENST00000611833 RGPD1P0DJD0 1748 aa21.63■■□□□ 1.05
NEK3-206ENST00000611833 ARHGAP23Q9P227 1491 aa21.63■■□□□ 1.05
NEK3-206ENST00000611833 API5Q9BZZ5 524 aaKnown RBP21.62■■□□□ 1.05
NEK3-206ENST00000611833 SPRYD3Q8NCJ5 442 aa21.61■■□□□ 1.05
NEK3-206ENST00000611833 SOX12O15370 315 aa21.61■■□□□ 1.05
NEK3-206ENST00000611833 IL27Q8NEV9 243 aa21.61■■□□□ 1.05
NEK3-206ENST00000611833 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
NEK3-206ENST00000611833 SIRT2Q8IXJ6 389 aa21.6■■□□□ 1.05
NEK3-206ENST00000611833 MCM10Q7L590 875 aa21.59■■□□□ 1.05
NEK3-206ENST00000611833 TBX22Q9Y458 520 aa21.59■■□□□ 1.05
NEK3-206ENST00000611833 KRT24Q2M2I5 525 aa21.58■■□□□ 1.04
NEK3-206ENST00000611833 RGPD8O14715 1765 aaPredicted RBP21.57■■□□□ 1.04
NEK3-206ENST00000611833 BMP2KLQ5H9B9 411 aa21.57■■□□□ 1.04
NEK3-206ENST00000611833 CHL1O00533 1208 aa21.57■■□□□ 1.04
NEK3-206ENST00000611833 MAP3K19Q56UN5 1328 aa21.57■■□□□ 1.04
NEK3-206ENST00000611833 TTC21AQ8NDW8 1320 aa21.57■■□□□ 1.04
NEK3-206ENST00000611833 DIP2AQ14689 1571 aa21.56■■□□□ 1.04
NEK3-206ENST00000611833 HSCBQ8IWL3 235 aa21.56■■□□□ 1.04
NEK3-206ENST00000611833 FMN2Q9NZ56 1722 aa21.55■■□□□ 1.04
NEK3-206ENST00000611833 HAP1P54257 671 aaPredicted RBP21.55■■□□□ 1.04
NEK3-206ENST00000611833 FER1L4A9Z1Z3 1794 aa21.54■■□□□ 1.04
NEK3-206ENST00000611833 BRPF3Q9ULD4 1205 aa21.54■■□□□ 1.04
NEK3-206ENST00000611833 ARHGEF10O15013 1369 aa21.53■■□□□ 1.04
NEK3-206ENST00000611833 RBM25P49756 843 aaKnown RBP21.53■■□□□ 1.04
NEK3-206ENST00000611833 NGDNQ8NEJ9 315 aaKnown RBP21.53■■□□□ 1.04
NEK3-206ENST00000611833 KIF24Q5T7B8 1368 aa21.53■■□□□ 1.04
NEK3-206ENST00000611833 KIAA0232Q92628 1395 aa21.53■■□□□ 1.04
NEK3-206ENST00000611833 RGS12O14924 1447 aa21.52■■□□□ 1.04
NEK3-206ENST00000611833 CRB1P82279 1406 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms