RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 GNAI3P08754 354 aa10.63□□□□□ -0.71
LIG4-204ENST00000611712 MYOM2P54296 1465 aa10.63□□□□□ -0.71
LIG4-204ENST00000611712 ZFYVE16Q7Z3T8 1539 aa10.63□□□□□ -0.71
LIG4-204ENST00000611712 GNAI2P04899 355 aa10.63□□□□□ -0.71
LIG4-204ENST00000611712 CCDC30Q5VVM6 783 aa10.63□□□□□ -0.71
LIG4-204ENST00000611712 ANO8Q9HCE9 1232 aaPredicted RBP10.63□□□□□ -0.71
LIG4-204ENST00000611712 VAMP4O75379 141 aa10.63□□□□□ -0.71
LIG4-204ENST00000611712 UBTFL1P0CB47 393 aaPredicted RBP10.63□□□□□ -0.71
LIG4-204ENST00000611712 CIZ1Q9ULV3 898 aaPredicted RBP10.63□□□□□ -0.71
LIG4-204ENST00000611712 GOLGA6L4A6NEF3 574 aa10.62□□□□□ -0.71
LIG4-204ENST00000611712 NEK4P51957 841 aa10.62□□□□□ -0.71
LIG4-204ENST00000611712 C8orf58Q8NAV2 365 aa10.62□□□□□ -0.71
LIG4-204ENST00000611712 GPATCH3Q96I76 525 aa10.62□□□□□ -0.71
LIG4-204ENST00000611712 HDAC5Q9UQL6 1122 aa10.62□□□□□ -0.71
LIG4-204ENST00000611712 SMARCA5O60264 1052 aaPredicted RBP10.62□□□□□ -0.71
LIG4-204ENST00000611712 TBC1D9Q6ZT07 1266 aa10.62□□□□□ -0.71
LIG4-204ENST00000611712 ABTB2Q8N961 1025 aa10.62□□□□□ -0.71
LIG4-204ENST00000611712 ARHGAP45Q92619 1136 aa10.62□□□□□ -0.71
LIG4-204ENST00000611712 YTHDC2Q9H6S0 1430 aaKnown RBP10.62□□□□□ -0.71
LIG4-204ENST00000611712 CCT4P50991 539 aaKnown RBP10.62□□□□□ -0.71
LIG4-204ENST00000611712 FAM43AQ8N2R8 423 aa10.62□□□□□ -0.71
LIG4-204ENST00000611712 MRPL50Q8N5N7 158 aaKnown RBP10.62□□□□□ -0.71
LIG4-204ENST00000611712 POGZQ7Z3K3 1410 aa10.61□□□□□ -0.71
LIG4-204ENST00000611712 CLTCL1P53675 1640 aa10.61□□□□□ -0.71
LIG4-204ENST00000611712 CSB-PGBD3P0DP91 1061 aa10.61□□□□□ -0.71
LIG4-204ENST00000611712 C9orf78Q9NZ63 289 aaPredicted RBP10.61□□□□□ -0.71
LIG4-204ENST00000611712 NAP1L2Q9ULW6 460 aaPredicted RBP10.61□□□□□ -0.71
LIG4-204ENST00000611712 SURF6O75683 361 aaKnown RBP10.61□□□□□ -0.71
LIG4-204ENST00000611712 PSME1Q06323 249 aa10.61□□□□□ -0.71
LIG4-204ENST00000611712 C1orf141Q5JVX7 400 aa10.61□□□□□ -0.71
LIG4-204ENST00000611712 F6X3S4 739 aa10.6□□□□□ -0.71
LIG4-204ENST00000611712 ERC2O15083 957 aa10.6□□□□□ -0.71
LIG4-204ENST00000611712 EXOC6BQ9Y2D4 811 aa10.6□□□□□ -0.71
LIG4-204ENST00000611712 NCKAP5LQ9HCH0 1330 aa10.6□□□□□ -0.71
LIG4-204ENST00000611712 GRPEL1Q9HAV7 217 aa10.6□□□□□ -0.71
LIG4-204ENST00000611712 CAVIN1Q6NZI2 390 aaKnown RBP10.6□□□□□ -0.71
LIG4-204ENST00000611712 AEBP1Q8IUX7 1158 aa10.6□□□□□ -0.71
LIG4-204ENST00000611712 DIAPH3Q9NSV4 1193 aa10.6□□□□□ -0.71
LIG4-204ENST00000611712 PPP6R1Q9UPN7 881 aa10.6□□□□□ -0.71
LIG4-204ENST00000611712 NCBP3Q53F19 620 aaKnown RBP10.59□□□□□ -0.71
LIG4-204ENST00000611712 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
LIG4-204ENST00000611712 TNPO1Q92973 898 aaKnown RBP10.59□□□□□ -0.71
LIG4-204ENST00000611712 A0A0G2JS52 829 aa10.59□□□□□ -0.71
LIG4-204ENST00000611712 MADDQ8WXG6 1647 aa10.59□□□□□ -0.71
LIG4-204ENST00000611712 TET3O43151 1660 aa10.59□□□□□ -0.71
LIG4-204ENST00000611712 PPIP5K1Q6PFW1 1433 aa10.59□□□□□ -0.71
LIG4-204ENST00000611712 NASPP49321 788 aaPredicted RBP10.59□□□□□ -0.71
LIG4-204ENST00000611712 HSP90AB2PQ58FF8 381 aa10.59□□□□□ -0.71
LIG4-204ENST00000611712 LRRCC1Q9C099 1032 aa10.59□□□□□ -0.71
LIG4-204ENST00000611712 PRPF40AO75400 957 aaKnown RBP10.58□□□□□ -0.71
LIG4-204ENST00000611712 ACEP12821 1306 aa10.58□□□□□ -0.72
LIG4-204ENST00000611712 ZBTB7BO15156 539 aaPredicted RBP10.58□□□□□ -0.72
LIG4-204ENST00000611712 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
LIG4-204ENST00000611712 KRT24Q2M2I5 525 aa10.58□□□□□ -0.72
LIG4-204ENST00000611712 PLEKHF1Q96S99 279 aa10.57□□□□□ -0.72
LIG4-204ENST00000611712 ZFYVE9O95405 1425 aa10.57□□□□□ -0.72
LIG4-204ENST00000611712 IFIT2P09913 472 aaKnown RBP10.57□□□□□ -0.72
LIG4-204ENST00000611712 TAOK2Q9UL54 1235 aa10.57□□□□□ -0.72
LIG4-204ENST00000611712 SSFA2P28290 1259 aa10.57□□□□□ -0.72
LIG4-204ENST00000611712 RUFY2Q8WXA3 655 aa10.57□□□□□ -0.72
LIG4-204ENST00000611712 RBM42Q9BTD8 480 aaKnown RBP10.57□□□□□ -0.72
LIG4-204ENST00000611712 E9PCH4 1651 aa10.57□□□□□ -0.72
LIG4-204ENST00000611712 LAMC1P11047 1609 aa10.56□□□□□ -0.72
LIG4-204ENST00000611712 SHROOM2Q13796 1616 aa10.56□□□□□ -0.72
LIG4-204ENST00000611712 PHF14O94880 888 aa10.56□□□□□ -0.72
LIG4-204ENST00000611712 EIF4A2Q14240 407 aaKnown RBP10.56□□□□□ -0.72
LIG4-204ENST00000611712 CWC22Q9HCG8 908 aaKnown RBP10.56□□□□□ -0.72
LIG4-204ENST00000611712 IL1RAPL2Q9NP60 686 aa10.56□□□□□ -0.72
LIG4-204ENST00000611712 ISY1Q9ULR0 285 aaKnown RBP10.56□□□□□ -0.72
LIG4-204ENST00000611712 MEIS3Q99687 375 aa10.56□□□□□ -0.72
LIG4-204ENST00000611712 CHMP3Q9Y3E7 222 aa10.56□□□□□ -0.72
LIG4-204ENST00000611712 MAP3K4Q9Y6R4 1608 aa10.56□□□□□ -0.72
LIG4-204ENST00000611712 IL13P35225 146 aa10.56□□□□□ -0.72
LIG4-204ENST00000611712 CEBPAP49715 358 aaPredicted RBP10.56□□□□□ -0.72
LIG4-204ENST00000611712 HSP90AB4PQ58FF6 505 aa10.56□□□□□ -0.72
LIG4-204ENST00000611712 C16orf71Q8IYS4 520 aaPredicted RBP10.56□□□□□ -0.72
LIG4-204ENST00000611712 THEMISQ8N1K5 641 aaPredicted RBP10.56□□□□□ -0.72
LIG4-204ENST00000611712 TTC21BQ7Z4L5 1316 aa10.56□□□□□ -0.72
LIG4-204ENST00000611712 ZRSR1Q15695 479 aaKnown RBP10.55□□□□□ -0.72
LIG4-204ENST00000611712 AMOTL2Q9Y2J4 779 aa10.55□□□□□ -0.72
LIG4-204ENST00000611712 PTPRCP08575 1304 aa10.55□□□□□ -0.72
LIG4-204ENST00000611712 KIF1BO60333 1816 aa10.55□□□□□ -0.72
LIG4-204ENST00000611712 GNAT3A8MTJ3 354 aa10.55□□□□□ -0.72
LIG4-204ENST00000611712 KIAA2012Q0VF49 1180 aa10.55□□□□□ -0.72
LIG4-204ENST00000611712 TTC22Q5TAA0 569 aa10.55□□□□□ -0.72
LIG4-204ENST00000611712 SPHKAPQ2M3C7 1700 aa10.55□□□□□ -0.72
LIG4-204ENST00000611712 EFCAB6Q5THR3 1501 aa10.55□□□□□ -0.72
LIG4-204ENST00000611712 MCM2P49736 904 aa10.55□□□□□ -0.72
LIG4-204ENST00000611712 SRCIN1Q9C0H9 1055 aa10.55□□□□□ -0.72
LIG4-204ENST00000611712 AIMP1Q12904 312 aaKnown RBP10.55□□□□□ -0.72
LIG4-204ENST00000611712 ANKRD44Q8N8A2 993 aa10.55□□□□□ -0.72
LIG4-204ENST00000611712 ARAP3Q8WWN8 1544 aa10.54□□□□□ -0.72
LIG4-204ENST00000611712 ZKSCAN1P17029 563 aaPredicted RBP10.54□□□□□ -0.72
LIG4-204ENST00000611712 SNX21Q969T3 373 aa10.54□□□□□ -0.72
LIG4-204ENST00000611712 MAP4K4O95819 1239 aaPredicted RBP10.54□□□□□ -0.72
LIG4-204ENST00000611712 CLASRPQ8N2M8 674 aaKnown RBP10.54□□□□□ -0.72
LIG4-204ENST00000611712 RNF214Q8ND24 703 aa10.54□□□□□ -0.72
LIG4-204ENST00000611712 ATP6V1DQ9Y5K8 247 aa10.54□□□□□ -0.72
LIG4-204ENST00000611712 NEXNQ0ZGT2 675 aa10.54□□□□□ -0.72
LIG4-204ENST00000611712 CSPP1Q1MSJ5 1256 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms