RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 SLC52A1Q9NWF4 448 aa16.67■□□□□ 0.26
MUC1-223ENST00000611571 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
MUC1-223ENST00000611571 DDX58O95786 925 aaKnown RBP16.66■□□□□ 0.26
MUC1-223ENST00000611571 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.66■□□□□ 0.26
MUC1-223ENST00000611571 CCDC61Q9Y6R9 512 aa16.66■□□□□ 0.26
MUC1-223ENST00000611571 RTEL1-TNFRSF6BF6WH68 1400 aa16.66■□□□□ 0.26
MUC1-223ENST00000611571 KRT24Q2M2I5 525 aa16.66■□□□□ 0.26
MUC1-223ENST00000611571 ZNF771Q7L3S4 317 aaPredicted RBP16.66■□□□□ 0.26
MUC1-223ENST00000611571 USHBP1Q8N6Y0 703 aa16.65■□□□□ 0.26
MUC1-223ENST00000611571 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
MUC1-223ENST00000611571 ATP2B1P20020 1258 aa16.65■□□□□ 0.26
MUC1-223ENST00000611571 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
MUC1-223ENST00000611571 RPAP2Q8IXW5 612 aaPredicted RBP16.65■□□□□ 0.26
MUC1-223ENST00000611571 GAS2L2Q8NHY3 880 aa16.65■□□□□ 0.26
MUC1-223ENST00000611571 CUL7Q14999 1698 aa16.65■□□□□ 0.26
MUC1-223ENST00000611571 NOS1P29475 1434 aa16.65■□□□□ 0.26
MUC1-223ENST00000611571 HSP90AB4PQ58FF6 505 aa16.65■□□□□ 0.26
MUC1-223ENST00000611571 TSPYL6Q8N831 410 aa16.65■□□□□ 0.26
MUC1-223ENST00000611571 NUP153P49790 1475 aaKnown RBP16.65■□□□□ 0.26
MUC1-223ENST00000611571 SRCIN1Q9C0H9 1055 aa16.64■□□□□ 0.25
MUC1-223ENST00000611571 ZRANB1Q9UGI0 708 aa16.64■□□□□ 0.25
MUC1-223ENST00000611571 PRAG1Q86YV5 1406 aa16.64■□□□□ 0.25
MUC1-223ENST00000611571 SYTL4Q96C24 671 aaPredicted RBP16.64■□□□□ 0.25
MUC1-223ENST00000611571 CWC22Q9HCG8 908 aaKnown RBP16.64■□□□□ 0.25
MUC1-223ENST00000611571 MBIPQ9NS73 344 aa16.64■□□□□ 0.25
MUC1-223ENST00000611571 MYL6BP14649 208 aa16.63■□□□□ 0.25
MUC1-223ENST00000611571 RALGAPBQ86X10 1494 aa16.63■□□□□ 0.25
MUC1-223ENST00000611571 FYB1O15117 783 aa16.63■□□□□ 0.25
MUC1-223ENST00000611571 PPFIA3O75145 1194 aa16.63■□□□□ 0.25
MUC1-223ENST00000611571 CCT4P50991 539 aaKnown RBP16.63■□□□□ 0.25
MUC1-223ENST00000611571 JAKMIP1Q96N16 626 aaKnown RBP16.63■□□□□ 0.25
MUC1-223ENST00000611571 CCDC73Q6ZRK6 1079 aa16.63■□□□□ 0.25
MUC1-223ENST00000611571 ZSCAN30Q86W11 494 aa16.63■□□□□ 0.25
MUC1-223ENST00000611571 SCAF11Q99590 1463 aaKnown RBP16.63■□□□□ 0.25
MUC1-223ENST00000611571 RAPGEF4Q8WZA2 1011 aa16.63■□□□□ 0.25
MUC1-223ENST00000611571 RNF123Q5XPI4 1314 aa16.62■□□□□ 0.25
MUC1-223ENST00000611571 UQCRHLA0A096LP55 91 aa16.62■□□□□ 0.25
MUC1-223ENST00000611571 UQCRHP07919 91 aa16.62■□□□□ 0.25
MUC1-223ENST00000611571 CAMK4Q16566 473 aa16.62■□□□□ 0.25
MUC1-223ENST00000611571 LARP1BQ659C4 914 aaKnown RBP16.62■□□□□ 0.25
MUC1-223ENST00000611571 DTNBO60941 627 aa16.62■□□□□ 0.25
MUC1-223ENST00000611571 BAG4O95429 457 aaKnown RBP16.62■□□□□ 0.25
MUC1-223ENST00000611571 ESCO1Q5FWF5 840 aa16.62■□□□□ 0.25
MUC1-223ENST00000611571 ANXA1P04083 346 aa16.62■□□□□ 0.25
MUC1-223ENST00000611571 MCM2P49736 904 aa16.61■□□□□ 0.25
MUC1-223ENST00000611571 GTF2E1P29083 439 aaPredicted RBP16.61■□□□□ 0.25
MUC1-223ENST00000611571 C8orf58Q8NAV2 365 aa16.61■□□□□ 0.25
MUC1-223ENST00000611571 BMP2KLQ5H9B9 411 aa16.61■□□□□ 0.25
MUC1-223ENST00000611571 DDX11Q96FC9 970 aa16.61■□□□□ 0.25
MUC1-223ENST00000611571 MEIS3Q99687 375 aa16.61■□□□□ 0.25
MUC1-223ENST00000611571 FAM177BA6PVY3 158 aa16.6■□□□□ 0.25
MUC1-223ENST00000611571 CCDC83Q8IWF9 413 aa16.6■□□□□ 0.25
MUC1-223ENST00000611571 C14orf93Q9H972 538 aaKnown RBP16.6■□□□□ 0.25
MUC1-223ENST00000611571 ZNF530Q6P9A1 599 aaPredicted RBP16.6■□□□□ 0.25
MUC1-223ENST00000611571 SPG7Q9UQ90 795 aa16.6■□□□□ 0.25
MUC1-223ENST00000611571 CYP46A1Q9Y6A2 500 aa16.6■□□□□ 0.25
MUC1-223ENST00000611571 WDR33Q9C0J8 1336 aaKnown RBP16.6■□□□□ 0.25
MUC1-223ENST00000611571 ATAD2Q6PL18 1390 aa16.6■□□□□ 0.25
MUC1-223ENST00000611571 MX1P20591 662 aa16.6■□□□□ 0.25
MUC1-223ENST00000611571 ALDH1L2Q3SY69 923 aa16.6■□□□□ 0.25
MUC1-223ENST00000611571 AACSQ86V21 672 aa16.6■□□□□ 0.25
MUC1-223ENST00000611571 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
MUC1-223ENST00000611571 CASTP20810 708 aaKnown RBP16.59■□□□□ 0.25
MUC1-223ENST00000611571 PDE4CQ08493 712 aa16.59■□□□□ 0.25
MUC1-223ENST00000611571 LRRFIP2Q9Y608 721 aaKnown RBP16.59■□□□□ 0.25
MUC1-223ENST00000611571 CCDC85AQ96PX6 553 aaPredicted RBP16.59■□□□□ 0.25
MUC1-223ENST00000611571 PZPP20742 1482 aa16.59■□□□□ 0.25
MUC1-223ENST00000611571 ATP10BO94823 1461 aa16.59■□□□□ 0.25
MUC1-223ENST00000611571 TPD52L1Q16890 204 aaPredicted RBP16.59■□□□□ 0.25
MUC1-223ENST00000611571 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
MUC1-223ENST00000611571 TNNT3P45378 269 aaPredicted RBP16.58■□□□□ 0.25
MUC1-223ENST00000611571 USP25Q9UHP3 1055 aa16.58■□□□□ 0.25
MUC1-223ENST00000611571 TPM2P07951 284 aa16.58■□□□□ 0.24
MUC1-223ENST00000611571 NUCB1Q02818 461 aa16.58■□□□□ 0.24
MUC1-223ENST00000611571 NFXL1Q6ZNB6 911 aa16.58■□□□□ 0.24
MUC1-223ENST00000611571 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
MUC1-223ENST00000611571 SYNE3Q6ZMZ3 975 aa16.57■□□□□ 0.24
MUC1-223ENST00000611571 FILIP1Q7Z7B0 1213 aa16.57■□□□□ 0.24
MUC1-223ENST00000611571 PRDM10Q9NQV6 1147 aa16.57■□□□□ 0.24
MUC1-223ENST00000611571 KDM2BQ8NHM5 1336 aa16.57■□□□□ 0.24
MUC1-223ENST00000611571 SDSP20132 328 aa16.57■□□□□ 0.24
MUC1-223ENST00000611571 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
MUC1-223ENST00000611571 TAF7Q15545 349 aaPredicted RBP16.56■□□□□ 0.24
MUC1-223ENST00000611571 RPGRIP1LQ68CZ1 1315 aa16.56■□□□□ 0.24
MUC1-223ENST00000611571 TRDNQ13061 729 aa16.56■□□□□ 0.24
MUC1-223ENST00000611571 HSP90AB2PQ58FF8 381 aa16.56■□□□□ 0.24
MUC1-223ENST00000611571 CPLX2Q6PUV4 134 aaKnown RBP16.56■□□□□ 0.24
MUC1-223ENST00000611571 NCKAP5LQ9HCH0 1330 aa16.56■□□□□ 0.24
MUC1-223ENST00000611571 ZNF830Q96NB3 372 aaPredicted RBP16.56■□□□□ 0.24
MUC1-223ENST00000611571 PSMA5P28066 241 aa16.55■□□□□ 0.24
MUC1-223ENST00000611571 HDAC1Q13547 482 aaPredicted RBP16.55■□□□□ 0.24
MUC1-223ENST00000611571 RALYLQ86SE5 291 aaKnown RBP16.55■□□□□ 0.24
MUC1-223ENST00000611571 TCEANC2Q96MN5 208 aa16.55■□□□□ 0.24
MUC1-223ENST00000611571 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
MUC1-223ENST00000611571 PDRG1Q9NUG6 133 aa16.55■□□□□ 0.24
MUC1-223ENST00000611571 TEX14Q8IWB6 1497 aa16.55■□□□□ 0.24
MUC1-223ENST00000611571 EVA1CP58658 441 aa16.55■□□□□ 0.24
MUC1-223ENST00000611571 TNMDQ9H2S6 317 aa16.55■□□□□ 0.24
MUC1-223ENST00000611571 TFIP11Q9UBB9 837 aaKnown RBP16.55■□□□□ 0.24
MUC1-223ENST00000611571 ZGPATQ8N5A5 531 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms