RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 PEAK1Q9H792 1746 aa36.01■■■■□ 3.35
CSPG5-205ENST00000610462 ADAMTSL3P82987 1691 aa36.01■■■■□ 3.35
CSPG5-205ENST00000610462 ANKARQ7Z5J8 1434 aa36.01■■■■□ 3.35
CSPG5-205ENST00000610462 KCNA6P17658 529 aa36■■■■□ 3.35
CSPG5-205ENST00000610462 PMFBP1Q8TBY8 1022 aa36■■■■□ 3.35
CSPG5-205ENST00000610462 SSH1Q8WYL5 1049 aa36■■■■□ 3.35
CSPG5-205ENST00000610462 FMN2Q9NZ56 1722 aa36■■■■□ 3.35
CSPG5-205ENST00000610462 DZIP1LQ8IYY4 767 aaKnown RBP35.98■■■■□ 3.35
CSPG5-205ENST00000610462 CHD2O14647 1828 aaKnown RBP35.97■■■■□ 3.35
CSPG5-205ENST00000610462 EIF4A2Q14240 407 aaKnown RBP35.97■■■■□ 3.35
CSPG5-205ENST00000610462 MVPQ14764 893 aaKnown RBP35.96■■■■□ 3.35
CSPG5-205ENST00000610462 NGDNQ8NEJ9 315 aaKnown RBP35.96■■■■□ 3.35
CSPG5-205ENST00000610462 LMOD3Q0VAK6 560 aa35.96■■■■□ 3.35
CSPG5-205ENST00000610462 ERICH6Q7L0X2 663 aa35.96■■■■□ 3.35
CSPG5-205ENST00000610462 ANKLE2Q86XL3 938 aa35.94■■■■□ 3.34
CSPG5-205ENST00000610462 FTSJ3Q8IY81 847 aaKnown RBP35.94■■■■□ 3.34
CSPG5-205ENST00000610462 RGPD1P0DJD0 1748 aa35.94■■■■□ 3.34
CSPG5-205ENST00000610462 ALDH1L2Q3SY69 923 aa35.93■■■■□ 3.34
CSPG5-205ENST00000610462 IPO9Q96P70 1041 aaKnown RBP35.93■■■■□ 3.34
CSPG5-205ENST00000610462 IFT57Q9NWB7 429 aa35.93■■■■□ 3.34
CSPG5-205ENST00000610462 GNAI1P63096 354 aa35.92■■■■□ 3.34
CSPG5-205ENST00000610462 PIK3C2AO00443 1686 aa35.92■■■■□ 3.34
CSPG5-205ENST00000610462 ZNF428Q96B54 188 aa35.92■■■■□ 3.34
CSPG5-205ENST00000610462 LAS1LQ9Y4W2 734 aaKnown RBP35.92■■■■□ 3.34
CSPG5-205ENST00000610462 THUMPD2Q9BTF0 503 aaKnown RBP35.91■■■■□ 3.34
CSPG5-205ENST00000610462 SETD1BQ9UPS6 1966 aaKnown RBP35.91■■■■□ 3.34
CSPG5-205ENST00000610462 ATF7IPQ6VMQ6 1270 aa35.9■■■■□ 3.34
CSPG5-205ENST00000610462 ZNF853P0CG23 659 aa35.9■■■■□ 3.34
CSPG5-205ENST00000610462 TRIM27P14373 513 aa35.9■■■■□ 3.34
CSPG5-205ENST00000610462 PCDHB15Q9Y5E8 787 aa35.9■■■■□ 3.34
CSPG5-205ENST00000610462 KIF16BQ96L93 1317 aa35.89■■■■□ 3.34
CSPG5-205ENST00000610462 NOB1Q9ULX3 412 aaKnown RBP35.88■■■■□ 3.34
CSPG5-205ENST00000610462 RGS3P49796 1198 aa35.88■■■■□ 3.33
CSPG5-205ENST00000610462 HSP90AB2PQ58FF8 381 aa35.87■■■■□ 3.33
CSPG5-205ENST00000610462 SULT6B1Q6IMI4 303 aa35.87■■■■□ 3.33
CSPG5-205ENST00000610462 NOP58Q9Y2X3 529 aaKnown RBP35.87■■■■□ 3.33
CSPG5-205ENST00000610462 IPO8O15397 1037 aaKnown RBP35.85■■■■□ 3.33
CSPG5-205ENST00000610462 FAM161AQ3B820 660 aa35.85■■■■□ 3.33
CSPG5-205ENST00000610462 AEBP1Q8IUX7 1158 aa35.85■■■■□ 3.33
CSPG5-205ENST00000610462 BRPF1P55201 1214 aaPredicted RBP35.85■■■■□ 3.33
CSPG5-205ENST00000610462 MAP3K19Q56UN5 1328 aa35.84■■■■□ 3.33
CSPG5-205ENST00000610462 USP54Q70EL1 1684 aa35.84■■■■□ 3.33
CSPG5-205ENST00000610462 NPM2Q86SE8 214 aaKnown RBP35.83■■■■□ 3.33
CSPG5-205ENST00000610462 SBNO1A3KN83 1393 aa35.83■■■■□ 3.33
CSPG5-205ENST00000610462 CFAP44Q96MT7 982 aa35.82■■■■□ 3.33
CSPG5-205ENST00000610462 MBIPQ9NS73 344 aa35.82■■■■□ 3.33
CSPG5-205ENST00000610462 SOX12O15370 315 aa35.82■■■■□ 3.32
CSPG5-205ENST00000610462 DDX19BQ9UMR2 479 aa35.82■■■■□ 3.32
CSPG5-205ENST00000610462 VAMP4O75379 141 aa35.81■■■■□ 3.32
CSPG5-205ENST00000610462 RWDD1Q9H446 243 aaPredicted RBP35.81■■■■□ 3.32
CSPG5-205ENST00000610462 FLT4P35916 1363 aa35.81■■■■□ 3.32
CSPG5-205ENST00000610462 MARF1Q9Y4F3 1742 aaKnown RBP35.81■■■■□ 3.32
CSPG5-205ENST00000610462 C8orf34Q49A92 452 aa35.8■■■■□ 3.32
CSPG5-205ENST00000610462 ARHGEF10O15013 1369 aa35.79■■■■□ 3.32
CSPG5-205ENST00000610462 FAM83GA6ND36 823 aa35.78■■■■□ 3.32
CSPG5-205ENST00000610462 ITPRIPQ8IWB1 547 aa35.77■■■■□ 3.32
CSPG5-205ENST00000610462 VIRMAQ69YN4 1812 aaKnown RBP35.77■■■■□ 3.32
CSPG5-205ENST00000610462 TMEM57Q8N5G2 664 aa35.75■■■■□ 3.31
CSPG5-205ENST00000610462 ZBTB47Q9UFB7 747 aaPredicted RBP35.75■■■■□ 3.31
CSPG5-205ENST00000610462 NLRP6P59044 892 aa35.74■■■■□ 3.31
CSPG5-205ENST00000610462 TSPYL6Q8N831 410 aa35.74■■■■□ 3.31
CSPG5-205ENST00000610462 DCTN1Q14203 1278 aa35.73■■■■□ 3.31
CSPG5-205ENST00000610462 MRPL50Q8N5N7 158 aaKnown RBP35.73■■■■□ 3.31
CSPG5-205ENST00000610462 PAK3O75914 559 aaPredicted RBP35.72■■■■□ 3.31
CSPG5-205ENST00000610462 AMPHP49418 695 aa35.72■■■■□ 3.31
CSPG5-205ENST00000610462 TWISTNBQ3B726 338 aaPredicted RBP35.71■■■■□ 3.31
CSPG5-205ENST00000610462 ARHGAP45Q92619 1136 aa35.7■■■■□ 3.31
CSPG5-205ENST00000610462 KIF24Q5T7B8 1368 aa35.7■■■■□ 3.3
CSPG5-205ENST00000610462 PHF8Q9UPP1 1060 aa35.69■■■■□ 3.3
CSPG5-205ENST00000610462 NPHP4O75161 1426 aaPredicted RBP35.69■■■■□ 3.3
CSPG5-205ENST00000610462 ADGRL3Q9HAR2 1447 aa35.68■■■■□ 3.3
CSPG5-205ENST00000610462 KDRP35968 1356 aa35.68■■■■□ 3.3
CSPG5-205ENST00000610462 C8orf58Q8NAV2 365 aa35.68■■■■□ 3.3
CSPG5-205ENST00000610462 PDZRN3Q9UPQ7 1066 aa35.67■■■■□ 3.3
CSPG5-205ENST00000610462 HDAC1Q13547 482 aaPredicted RBP35.66■■■■□ 3.3
CSPG5-205ENST00000610462 ZBTB40Q9NUA8 1239 aa35.66■■■■□ 3.3
CSPG5-205ENST00000610462 IGSF1Q8N6C5 1336 aa35.65■■■■□ 3.3
CSPG5-205ENST00000610462 ELL2O00472 640 aaPredicted RBP35.65■■■■□ 3.3
CSPG5-205ENST00000610462 ABTB2Q8N961 1025 aa35.64■■■■□ 3.3
CSPG5-205ENST00000610462 EYA1Q99502 592 aa35.63■■■■□ 3.29
CSPG5-205ENST00000610462 NUTM2GQ5VZR2 741 aa35.62■■■■□ 3.29
CSPG5-205ENST00000610462 CHL1O00533 1208 aa35.61■■■■□ 3.29
CSPG5-205ENST00000610462 MCM10Q7L590 875 aa35.61■■■■□ 3.29
CSPG5-205ENST00000610462 HOXC9P31274 260 aa35.6■■■■□ 3.29
CSPG5-205ENST00000610462 RBM33Q96EV2 1170 aaKnown RBP35.6■■■■□ 3.29
CSPG5-205ENST00000610462 DDRGK1Q96HY6 314 aa35.59■■■■□ 3.29
CSPG5-205ENST00000610462 CRB1P82279 1406 aa35.58■■■■□ 3.29
CSPG5-205ENST00000610462 MTHFSDQ2M296 383 aaKnown RBP35.57■■■■□ 3.28
CSPG5-205ENST00000610462 CHMP4BQ9H444 224 aaKnown RBP35.57■■■■□ 3.28
CSPG5-205ENST00000610462 KIAA0232Q92628 1395 aa35.56■■■■□ 3.28
CSPG5-205ENST00000610462 ABCC4O15439 1325 aa35.56■■■■□ 3.28
CSPG5-205ENST00000610462 HAP1P54257 671 aaPredicted RBP35.56■■■■□ 3.28
CSPG5-205ENST00000610462 LTN1O94822 1766 aa35.56■■■■□ 3.28
CSPG5-205ENST00000610462 NWD1Q149M9 1564 aa35.56■■■■□ 3.28
CSPG5-205ENST00000610462 RTL1A6NKG5 1358 aa35.54■■■■□ 3.28
CSPG5-205ENST00000610462 GAS2L2Q8NHY3 880 aa35.53■■■■□ 3.28
CSPG5-205ENST00000610462 API5Q9BZZ5 524 aaKnown RBP35.53■■■■□ 3.28
CSPG5-205ENST00000610462 C14orf37Q86TY3 774 aa35.52■■■■□ 3.28
CSPG5-205ENST00000610462 ZBTB7BO15156 539 aaPredicted RBP35.52■■■■□ 3.28
CSPG5-205ENST00000610462 ESCO1Q5FWF5 840 aa35.52■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms