RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 DTNBO60941 627 aa25.28■■□□□ 1.64
SSBP3-216ENST00000610401 RPGRIP1LQ68CZ1 1315 aa25.28■■□□□ 1.64
SSBP3-216ENST00000610401 GOLGA6L22H0YM25 854 aa25.28■■□□□ 1.64
SSBP3-216ENST00000610401 NASPP49321 788 aaPredicted RBP25.28■■□□□ 1.64
SSBP3-216ENST00000610401 ALDH1L2Q3SY69 923 aa25.28■■□□□ 1.64
SSBP3-216ENST00000610401 CDC45O75419 566 aa25.27■■□□□ 1.64
SSBP3-216ENST00000610401 TXNDC2Q86VQ3 553 aa25.27■■□□□ 1.64
SSBP3-216ENST00000610401 VSIG10Q8N0Z9 540 aa25.27■■□□□ 1.64
SSBP3-216ENST00000610401 HSP90AA2PQ14568 343 aaPredicted RBP25.27■■□□□ 1.64
SSBP3-216ENST00000610401 GCC1Q96CN9 775 aa25.27■■□□□ 1.64
SSBP3-216ENST00000610401 VWDEQ8N2E2 1590 aa25.26■■□□□ 1.63
SSBP3-216ENST00000610401 AK9Q5TCS8 1911 aa25.26■■□□□ 1.63
SSBP3-216ENST00000610401 SNX21Q969T3 373 aa25.26■■□□□ 1.63
SSBP3-216ENST00000610401 INO80Q9ULG1 1556 aaPredicted RBP25.26■■□□□ 1.63
SSBP3-216ENST00000610401 NRXN1Q9ULB1 1477 aa25.26■■□□□ 1.63
SSBP3-216ENST00000610401 PRPF40AO75400 957 aaKnown RBP25.26■■□□□ 1.63
SSBP3-216ENST00000610401 BAG4O95429 457 aaKnown RBP25.26■■□□□ 1.63
SSBP3-216ENST00000610401 ADGRB3O60242 1522 aa25.25■■□□□ 1.63
SSBP3-216ENST00000610401 PLEKHM2Q8IWE5 1019 aa25.25■■□□□ 1.63
SSBP3-216ENST00000610401 KIAA1210Q9ULL0 1709 aa25.25■■□□□ 1.63
SSBP3-216ENST00000610401 GNAI1P63096 354 aa25.25■■□□□ 1.63
SSBP3-216ENST00000610401 F6X3S4 739 aa25.24■■□□□ 1.63
SSBP3-216ENST00000610401 DDIT3P35638 169 aa25.24■■□□□ 1.63
SSBP3-216ENST00000610401 NSD2O96028 1365 aa25.24■■□□□ 1.63
SSBP3-216ENST00000610401 GLI2P10070 1586 aa25.23■■□□□ 1.63
SSBP3-216ENST00000610401 IL16Q14005 1332 aa25.23■■□□□ 1.63
SSBP3-216ENST00000610401 RNF214Q8ND24 703 aa25.23■■□□□ 1.63
SSBP3-216ENST00000610401 ANP32BQ92688 251 aaKnown RBP25.23■■□□□ 1.63
SSBP3-216ENST00000610401 PLEKHG5O94827 1062 aa25.22■■□□□ 1.63
SSBP3-216ENST00000610401 SULT6B1Q6IMI4 303 aa25.22■■□□□ 1.63
SSBP3-216ENST00000610401 MEIS3Q99687 375 aa25.21■■□□□ 1.63
SSBP3-216ENST00000610401 UHRF1BP1LA0JNW5 1464 aa25.21■■□□□ 1.63
SSBP3-216ENST00000610401 RBM10P98175 930 aaKnown RBP25.21■■□□□ 1.63
SSBP3-216ENST00000610401 KIDINS220Q9ULH0 1771 aa25.2■■□□□ 1.63
SSBP3-216ENST00000610401 CALD1Q05682 793 aaKnown RBP25.2■■□□□ 1.62
SSBP3-216ENST00000610401 SDSP20132 328 aa25.19■■□□□ 1.62
SSBP3-216ENST00000610401 EXOC6BQ9Y2D4 811 aa25.17■■□□□ 1.62
SSBP3-216ENST00000610401 ZMYM3Q14202 1370 aa25.16■■□□□ 1.62
SSBP3-216ENST00000610401 CAMSAP1Q5T5Y3 1602 aa25.16■■□□□ 1.62
SSBP3-216ENST00000610401 COG3Q96JB2 828 aa25.16■■□□□ 1.62
SSBP3-216ENST00000610401 SLC4A2P04920 1241 aa25.15■■□□□ 1.62
SSBP3-216ENST00000610401 IL13P35225 146 aa25.15■■□□□ 1.62
SSBP3-216ENST00000610401 FOXO3O43524 673 aa25.15■■□□□ 1.62
SSBP3-216ENST00000610401 SKOR2Q2VWA4 1001 aaPredicted RBP25.15■■□□□ 1.62
SSBP3-216ENST00000610401 IFT57Q9NWB7 429 aa25.15■■□□□ 1.62
SSBP3-216ENST00000610401 CIZ1Q9ULV3 898 aaPredicted RBP25.15■■□□□ 1.62
SSBP3-216ENST00000610401 TTC22Q5TAA0 569 aa25.14■■□□□ 1.62
SSBP3-216ENST00000610401 LARP6Q9BRS8 491 aaKnown RBP25.14■■□□□ 1.62
SSBP3-216ENST00000610401 API5Q9BZZ5 524 aaKnown RBP25.14■■□□□ 1.62
SSBP3-216ENST00000610401 YTHDC2Q9H6S0 1430 aaKnown RBP25.14■■□□□ 1.62
SSBP3-216ENST00000610401 KIAA1211Q6ZU35 1233 aa25.14■■□□□ 1.61
SSBP3-216ENST00000610401 ZNF428Q96B54 188 aa25.14■■□□□ 1.61
SSBP3-216ENST00000610401 CFAP44Q96MT7 982 aa25.14■■□□□ 1.61
SSBP3-216ENST00000610401 GDPD2Q9HCC8 539 aa25.14■■□□□ 1.61
SSBP3-216ENST00000610401 RILPL2Q969X0 211 aa25.13■■□□□ 1.61
SSBP3-216ENST00000610401 NSFL1CQ9UNZ2 370 aaKnown RBP25.13■■□□□ 1.61
SSBP3-216ENST00000610401 MSNP26038 577 aaKnown RBP25.13■■□□□ 1.61
SSBP3-216ENST00000610401 PRIM1P49642 420 aaKnown RBP25.13■■□□□ 1.61
SSBP3-216ENST00000610401 LRRC7Q96NW7 1537 aa25.12■■□□□ 1.61
SSBP3-216ENST00000610401 NEK4P51957 841 aa25.12■■□□□ 1.61
SSBP3-216ENST00000610401 USP26Q9BXU7 913 aa25.12■■□□□ 1.61
SSBP3-216ENST00000610401 SETBP1Q9Y6X0 1596 aa25.12■■□□□ 1.61
SSBP3-216ENST00000610401 COL3A1P02461 1466 aaPredicted RBP25.12■■□□□ 1.61
SSBP3-216ENST00000610401 MYO3AQ8NEV4 1616 aa25.11■■□□□ 1.61
SSBP3-216ENST00000610401 SYCE3A1L190 88 aa25.11■■□□□ 1.61
SSBP3-216ENST00000610401 TRIM6-TRIM34B2RNG4 842 aa25.11■■□□□ 1.61
SSBP3-216ENST00000610401 G2E3Q7L622 706 aa25.11■■□□□ 1.61
SSBP3-216ENST00000610401 SLC52A1Q9NWF4 448 aa25.11■■□□□ 1.61
SSBP3-216ENST00000610401 ABCA9Q8IUA7 1624 aa25.11■■□□□ 1.61
SSBP3-216ENST00000610401 XPCQ01831 940 aaPredicted RBP25.11■■□□□ 1.61
SSBP3-216ENST00000610401 ZSCAN23Q3MJ62 389 aa25.11■■□□□ 1.61
SSBP3-216ENST00000610401 RBSNQ9H1K0 784 aa25.11■■□□□ 1.61
SSBP3-216ENST00000610401 MAP4K4O95819 1239 aaPredicted RBP25.1■■□□□ 1.61
SSBP3-216ENST00000610401 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.1■■□□□ 1.61
SSBP3-216ENST00000610401 ABCC4O15439 1325 aa25.1■■□□□ 1.61
SSBP3-216ENST00000610401 IFT172Q9UG01 1749 aa25.1■■□□□ 1.61
SSBP3-216ENST00000610401 CD163L1Q9NR16 1453 aa25.1■■□□□ 1.61
SSBP3-216ENST00000610401 INTS3Q68E01 1043 aaKnown RBP25.1■■□□□ 1.61
SSBP3-216ENST00000610401 ADGRB2O60241 1585 aa25.1■■□□□ 1.61
SSBP3-216ENST00000610401 R3HCC1Q9Y3T6 440 aaKnown RBP25.09■■□□□ 1.61
SSBP3-216ENST00000610401 UPF3BQ9BZI7 483 aaKnown RBP25.09■■□□□ 1.61
SSBP3-216ENST00000610401 DCTPP1Q9H773 170 aa25.09■■□□□ 1.61
SSBP3-216ENST00000610401 NCOA3Q9Y6Q9 1424 aa25.09■■□□□ 1.61
SSBP3-216ENST00000610401 PPLO60437 1756 aa25.09■■□□□ 1.61
SSBP3-216ENST00000610401 RABEP1Q15276 862 aa25.09■■□□□ 1.61
SSBP3-216ENST00000610401 HSP90AB2PQ58FF8 381 aa25.09■■□□□ 1.61
SSBP3-216ENST00000610401 POGZQ7Z3K3 1410 aa25.08■■□□□ 1.61
SSBP3-216ENST00000610401 CEP85Q6P2H3 762 aa25.08■■□□□ 1.61
SSBP3-216ENST00000610401 CHMP4BQ9H444 224 aaKnown RBP25.08■■□□□ 1.61
SSBP3-216ENST00000610401 ABCC3O15438 1527 aa25.08■■□□□ 1.6
SSBP3-216ENST00000610401 KLHL40Q2TBA0 621 aa25.07■■□□□ 1.6
SSBP3-216ENST00000610401 YEATS2Q9ULM3 1422 aa25.07■■□□□ 1.6
SSBP3-216ENST00000610401 NUDT16Q96DE0 195 aaKnown RBP25.07■■□□□ 1.6
SSBP3-216ENST00000610401 CASC1Q6TDU7 716 aa25.07■■□□□ 1.6
SSBP3-216ENST00000610401 PUS7Q96PZ0 661 aaKnown RBP25.07■■□□□ 1.6
SSBP3-216ENST00000610401 ST18O60284 1047 aa25.06■■□□□ 1.6
SSBP3-216ENST00000610401 MSH6P52701 1360 aa25.06■■□□□ 1.6
SSBP3-216ENST00000610401 ARHGAP45Q92619 1136 aa25.05■■□□□ 1.6
SSBP3-216ENST00000610401 LMBRD1Q9NUN5 540 aa25.05■■□□□ 1.6
SSBP3-216ENST00000610401 FAM13BQ9NYF5 915 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms