RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 GDPD2Q9HCC8 539 aa9.63□□□□□ -0.87
HDDC2-207ENST00000608532 CDV3Q9UKY7 258 aaKnown RBP9.63□□□□□ -0.87
HDDC2-207ENST00000608532 POTECB2RU33 542 aa9.62□□□□□ -0.87
HDDC2-207ENST00000608532 GPR37L1O60883 481 aa9.62□□□□□ -0.87
HDDC2-207ENST00000608532 BMP1P13497 986 aa9.62□□□□□ -0.87
HDDC2-207ENST00000608532 TIMP2P16035 220 aa9.62□□□□□ -0.87
HDDC2-207ENST00000608532 ABL2P42684 1182 aa9.62□□□□□ -0.87
HDDC2-207ENST00000608532 NR1H3Q13133 447 aa9.62□□□□□ -0.87
HDDC2-207ENST00000608532 CCDC116Q8IYX3 515 aa9.62□□□□□ -0.87
HDDC2-207ENST00000608532 ITPKCQ96DU7 683 aa9.62□□□□□ -0.87
HDDC2-207ENST00000608532 ZFAND3Q9H8U3 227 aa9.62□□□□□ -0.87
HDDC2-207ENST00000608532 ATP13A2Q9NQ11 1180 aa9.62□□□□□ -0.87
HDDC2-207ENST00000608532 NBPF20Q3BBV1 942 aa9.61□□□□□ -0.87
HDDC2-207ENST00000608532 GMPR2Q9P2T1 348 aaKnown RBP9.61□□□□□ -0.87
HDDC2-207ENST00000608532 INTS6LQ5JSJ4 861 aaKnown RBP9.6□□□□□ -0.87
HDDC2-207ENST00000608532 PPP1R26Q5T8A7 1209 aaPredicted RBP9.59□□□□□ -0.87
HDDC2-207ENST00000608532 KLF16Q9BXK1 252 aaPredicted RBP9.59□□□□□ -0.87
HDDC2-207ENST00000608532 ZNF330Q9Y3S2 320 aaPredicted RBP9.59□□□□□ -0.87
HDDC2-207ENST00000608532 EMILIN1Q9Y6C2 1016 aa9.59□□□□□ -0.87
HDDC2-207ENST00000608532 C11orf95C9JLR9 678 aaPredicted RBP9.57□□□□□ -0.88
HDDC2-207ENST00000608532 DHX9Q08211 1270 aaKnown RBP9.57□□□□□ -0.88
HDDC2-207ENST00000608532 FLIIQ13045 1269 aa9.57□□□□□ -0.88
HDDC2-207ENST00000608532 IRF5Q13568 498 aa9.57□□□□□ -0.88
HDDC2-207ENST00000608532 PGPEP1Q9NXJ5 209 aa9.57□□□□□ -0.88
HDDC2-207ENST00000608532 GIGYF1O75420 1035 aaPredicted RBP9.56□□□□□ -0.88
HDDC2-207ENST00000608532 TRIM46Q7Z4K8 759 aa9.56□□□□□ -0.88
HDDC2-207ENST00000608532 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
HDDC2-207ENST00000608532 VAC14Q08AM6 782 aa9.55□□□□□ -0.88
HDDC2-207ENST00000608532 POM121Q96HA1 1249 aa9.55□□□□□ -0.88
HDDC2-207ENST00000608532 TMPRSS4Q9NRS4 437 aa9.55□□□□□ -0.88
HDDC2-207ENST00000608532 COG6Q9Y2V7 657 aa9.55□□□□□ -0.88
HDDC2-207ENST00000608532 RAD21O60216 631 aa9.54□□□□□ -0.88
HDDC2-207ENST00000608532 CBLBQ13191 982 aa9.54□□□□□ -0.88
HDDC2-207ENST00000608532 SCARF1Q14162 830 aa9.54□□□□□ -0.88
HDDC2-207ENST00000608532 C6orf118Q5T5N4 469 aa9.54□□□□□ -0.88
HDDC2-207ENST00000608532 MRPL14Q6P1L8 145 aaKnown RBP9.54□□□□□ -0.88
HDDC2-207ENST00000608532 PURBQ96QR8 312 aaKnown RBP9.54□□□□□ -0.88
HDDC2-207ENST00000608532 SENP2Q9HC62 589 aa9.54□□□□□ -0.88
HDDC2-207ENST00000608532 ERVH48-1M5A8F1 160 aa9.53□□□□□ -0.88
HDDC2-207ENST00000608532 ESPNB1AK53 854 aa9.52□□□□□ -0.89
HDDC2-207ENST00000608532 UPP2O95045 317 aa9.52□□□□□ -0.89
HDDC2-207ENST00000608532 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
HDDC2-207ENST00000608532 MCCD1P59942 119 aaPredicted RBP9.52□□□□□ -0.89
HDDC2-207ENST00000608532 EIF4G2P78344 907 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDDC2-207ENST00000608532 ZNF592Q92610 1267 aa9.52□□□□□ -0.89
HDDC2-207ENST00000608532 ZFP42Q96MM3 310 aa9.52□□□□□ -0.89
HDDC2-207ENST00000608532 BMP2P12643 396 aa9.51□□□□□ -0.89
HDDC2-207ENST00000608532 MEIOBQ8N635 442 aa9.51□□□□□ -0.89
HDDC2-207ENST00000608532 ZNF784Q8NCA9 323 aaPredicted RBP9.51□□□□□ -0.89
HDDC2-207ENST00000608532 TRIM47Q96LD4 638 aa9.51□□□□□ -0.89
HDDC2-207ENST00000608532 WASHC4Q2M389 1173 aa9.5□□□□□ -0.89
HDDC2-207ENST00000608532 WWC1Q8IX03 1113 aa9.5□□□□□ -0.89
HDDC2-207ENST00000608532 SEPT12Q8IYM1 358 aa9.5□□□□□ -0.89
HDDC2-207ENST00000608532 KIFC2Q96AC6 838 aa9.5□□□□□ -0.89
HDDC2-207ENST00000608532 CYLDQ9NQC7 956 aa9.5□□□□□ -0.89
HDDC2-207ENST00000608532 RNF20Q5VTR2 975 aa9.49□□□□□ -0.89
HDDC2-207ENST00000608532 LINC00528Q8N1L1 170 aa9.49□□□□□ -0.89
HDDC2-207ENST00000608532 AGBL1Q96MI9 1066 aa9.49□□□□□ -0.89
HDDC2-207ENST00000608532 CEP126Q9P2H0 1117 aa9.48□□□□□ -0.89
HDDC2-207ENST00000608532 PCDHB11Q9Y5F2 797 aa9.48□□□□□ -0.89
HDDC2-207ENST00000608532 RELBQ01201 579 aa9.47□□□□□ -0.89
HDDC2-207ENST00000608532 TSEN34Q9BSV6 310 aaKnown RBP9.47□□□□□ -0.89
HDDC2-207ENST00000608532 SEMA3FQ13275 785 aa9.46□□□□□ -0.9
HDDC2-207ENST00000608532 LILRA1O75019 489 aa9.45□□□□□ -0.9
HDDC2-207ENST00000608532 ADD1P35611 737 aaKnown RBP9.45□□□□□ -0.9
HDDC2-207ENST00000608532 SLFNL1Q499Z3 407 aa9.45□□□□□ -0.9
HDDC2-207ENST00000608532 Q6ZVU0 165 aa9.45□□□□□ -0.9
HDDC2-207ENST00000608532 CLUAP1Q96AJ1 413 aa9.45□□□□□ -0.9
HDDC2-207ENST00000608532 SOBPA7XYQ1 873 aa9.44□□□□□ -0.9
HDDC2-207ENST00000608532 ZNF775Q96BV0 537 aaPredicted RBP9.44□□□□□ -0.9
HDDC2-207ENST00000608532 ESF1Q9H501 851 aaKnown RBP9.44□□□□□ -0.9
HDDC2-207ENST00000608532 ZNF395Q9H8N7 513 aaPredicted RBP9.44□□□□□ -0.9
HDDC2-207ENST00000608532 MAN1A2O60476 641 aa9.43□□□□□ -0.9
HDDC2-207ENST00000608532 ADH1AP07327 375 aa9.43□□□□□ -0.9
HDDC2-207ENST00000608532 RNF135Q8IUD6 432 aa9.43□□□□□ -0.9
HDDC2-207ENST00000608532 TRIM52Q96A61 297 aa9.43□□□□□ -0.9
HDDC2-207ENST00000608532 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
HDDC2-207ENST00000608532 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
HDDC2-207ENST00000608532 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
HDDC2-207ENST00000608532 SOX11P35716 441 aa9.41□□□□□ -0.9
HDDC2-207ENST00000608532 SCTRP47872 440 aa9.41□□□□□ -0.9
HDDC2-207ENST00000608532 FIGNL2A6NMB9 653 aa9.4□□□□□ -0.9
HDDC2-207ENST00000608532 POM121CA8CG34 1229 aa9.4□□□□□ -0.9
HDDC2-207ENST00000608532 TSGA10IPQ3SY00 556 aa9.4□□□□□ -0.9
HDDC2-207ENST00000608532 INSM2Q96T92 566 aaPredicted RBP9.4□□□□□ -0.9
HDDC2-207ENST00000608532 CDCA7Q9BWT1 371 aaPredicted RBP9.4□□□□□ -0.9
HDDC2-207ENST00000608532 POLMQ9NP87 494 aaPredicted RBP9.4□□□□□ -0.9
HDDC2-207ENST00000608532 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.9
HDDC2-207ENST00000608532 TTLL8A6PVC2 850 aa9.39□□□□□ -0.91
HDDC2-207ENST00000608532 SPINT1O43278 529 aa9.39□□□□□ -0.91
HDDC2-207ENST00000608532 PTGIRP43119 386 aa9.39□□□□□ -0.91
HDDC2-207ENST00000608532 ERVK-9P63128 1117 aa9.39□□□□□ -0.91
HDDC2-207ENST00000608532 OXLD1Q5BKU9 147 aa9.39□□□□□ -0.91
HDDC2-207ENST00000608532 ATP5J2-PTCD1G3V325 749 aa9.38□□□□□ -0.91
HDDC2-207ENST00000608532 MYCP01106 439 aaPredicted RBP9.38□□□□□ -0.91
HDDC2-207ENST00000608532 PROSER2Q86WR7 435 aaPredicted RBP9.38□□□□□ -0.91
HDDC2-207ENST00000608532 PHTF2Q8N3S3 785 aa9.38□□□□□ -0.91
HDDC2-207ENST00000608532 SOS2Q07890 1332 aaPredicted RBP9.37□□□□□ -0.91
HDDC2-207ENST00000608532 CTSOP43234 321 aaPredicted RBP9.37□□□□□ -0.91
HDDC2-207ENST00000608532 DNMT3LQ9UJW3 386 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms