RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 PDXDC2PQ6P474 469 aa12.08□□□□□ -0.48
LINC00458-206ENST00000607494 CCDC116Q8IYX3 515 aa12.08□□□□□ -0.48
LINC00458-206ENST00000607494 USP17L8P0C7I0 530 aa12.07□□□□□ -0.48
LINC00458-206ENST00000607494 BMP2P12643 396 aa12.07□□□□□ -0.48
LINC00458-206ENST00000607494 CBLBQ13191 982 aa12.05□□□□□ -0.48
LINC00458-206ENST00000607494 SLC10A4Q96EP9 437 aa12.05□□□□□ -0.48
LINC00458-206ENST00000607494 MAN1A2O60476 641 aa12.04□□□□□ -0.48
LINC00458-206ENST00000607494 INSM1Q01101 510 aaPredicted RBP12.04□□□□□ -0.48
LINC00458-206ENST00000607494 PPP1R26Q5T8A7 1209 aaPredicted RBP12.04□□□□□ -0.48
LINC00458-206ENST00000607494 ZBTB33Q86T24 672 aa12.04□□□□□ -0.48
LINC00458-206ENST00000607494 IRF7Q92985 503 aa12.04□□□□□ -0.48
LINC00458-206ENST00000607494 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
LINC00458-206ENST00000607494 RFC5P40937 340 aa12.03□□□□□ -0.48
LINC00458-206ENST00000607494 NPAS3Q8IXF0 933 aa12.03□□□□□ -0.48
LINC00458-206ENST00000607494 KCTD15Q96SI1 283 aaPredicted RBP12.03□□□□□ -0.48
LINC00458-206ENST00000607494 DNMT3LQ9UJW3 386 aa12.03□□□□□ -0.48
LINC00458-206ENST00000607494 ADAM32Q8TC27 787 aa12.02□□□□□ -0.49
LINC00458-206ENST00000607494 UPP2O95045 317 aa12.01□□□□□ -0.49
LINC00458-206ENST00000607494 NEUROD2Q15784 382 aa12.01□□□□□ -0.49
LINC00458-206ENST00000607494 INTS6LQ5JSJ4 861 aaKnown RBP12.01□□□□□ -0.49
LINC00458-206ENST00000607494 STK17AQ9UEE5 414 aa12.01□□□□□ -0.49
LINC00458-206ENST00000607494 ZC3H4Q9UPT8 1303 aaKnown RBP12.01□□□□□ -0.49
LINC00458-206ENST00000607494 SOS2Q07890 1332 aaPredicted RBP12□□□□□ -0.49
LINC00458-206ENST00000607494 LORP23490 312 aaPredicted RBP11.99□□□□□ -0.49
LINC00458-206ENST00000607494 RAB15P59190 212 aa11.98□□□□□ -0.49
LINC00458-206ENST00000607494 PTK2Q05397 1052 aa11.98□□□□□ -0.49
LINC00458-206ENST00000607494 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
LINC00458-206ENST00000607494 AGBL1Q96MI9 1066 aa11.97□□□□□ -0.49
LINC00458-206ENST00000607494 TSEN34Q9BSV6 310 aaKnown RBP11.97□□□□□ -0.49
LINC00458-206ENST00000607494 TRIM34Q9BYJ4 488 aa11.97□□□□□ -0.49
LINC00458-206ENST00000607494 PGPEP1Q9NXJ5 209 aa11.97□□□□□ -0.49
LINC00458-206ENST00000607494 Q6ZVU0 165 aa11.95□□□□□ -0.5
LINC00458-206ENST00000607494 PCMTD1Q96MG8 357 aaPredicted RBP11.95□□□□□ -0.5
LINC00458-206ENST00000607494 TMPRSS4Q9NRS4 437 aa11.95□□□□□ -0.5
LINC00458-206ENST00000607494 FIGNL2A6NMB9 653 aa11.94□□□□□ -0.5
LINC00458-206ENST00000607494 PPFIA3O75145 1194 aa11.94□□□□□ -0.5
LINC00458-206ENST00000607494 CDV3Q9UKY7 258 aaKnown RBP11.94□□□□□ -0.5
LINC00458-206ENST00000607494 TTLL8A6PVC2 850 aa11.93□□□□□ -0.5
LINC00458-206ENST00000607494 GPSM3Q9Y4H4 160 aa11.93□□□□□ -0.5
LINC00458-206ENST00000607494 VSIG8P0DPA2 414 aa11.92□□□□□ -0.5
LINC00458-206ENST00000607494 RELBQ01201 579 aa11.92□□□□□ -0.5
LINC00458-206ENST00000607494 BRPF1P55201 1214 aaPredicted RBP11.91□□□□□ -0.5
LINC00458-206ENST00000607494 ZSCAN1Q8NBB4 408 aa11.91□□□□□ -0.5
LINC00458-206ENST00000607494 SPINT1O43278 529 aa11.9□□□□□ -0.5
LINC00458-206ENST00000607494 ZNF784Q8NCA9 323 aaPredicted RBP11.9□□□□□ -0.5
LINC00458-206ENST00000607494 GOPCQ9HD26 462 aa11.9□□□□□ -0.5
LINC00458-206ENST00000607494 CTSOP43234 321 aaPredicted RBP11.89□□□□□ -0.51
LINC00458-206ENST00000607494 DHX9Q08211 1270 aaKnown RBP11.89□□□□□ -0.51
LINC00458-206ENST00000607494 NBPF20Q3BBV1 942 aa11.89□□□□□ -0.51
LINC00458-206ENST00000607494 DZIP3Q86Y13 1208 aaKnown RBP11.89□□□□□ -0.51
LINC00458-206ENST00000607494 PTSQ03393 145 aa11.88□□□□□ -0.51
LINC00458-206ENST00000607494 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.88□□□□□ -0.51
LINC00458-206ENST00000607494 PNMA1Q8ND90 353 aa11.88□□□□□ -0.51
LINC00458-206ENST00000607494 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
LINC00458-206ENST00000607494 INSM2Q96T92 566 aaPredicted RBP11.88□□□□□ -0.51
LINC00458-206ENST00000607494 ZNF395Q9H8N7 513 aaPredicted RBP11.88□□□□□ -0.51
LINC00458-206ENST00000607494 ERVH48-1M5A8F1 160 aa11.87□□□□□ -0.51
LINC00458-206ENST00000607494 LILRA1O75019 489 aa11.85□□□□□ -0.51
LINC00458-206ENST00000607494 ADD1P35611 737 aaKnown RBP11.85□□□□□ -0.51
LINC00458-206ENST00000607494 TMEM259Q4ZIN3 620 aa11.85□□□□□ -0.51
LINC00458-206ENST00000607494 ESPNB1AK53 854 aa11.84□□□□□ -0.51
LINC00458-206ENST00000607494 FBXO45P0C2W1 286 aa11.84□□□□□ -0.51
LINC00458-206ENST00000607494 TPRNQ4KMQ1 711 aa11.83□□□□□ -0.52
LINC00458-206ENST00000607494 GPR161Q8N6U8 529 aaKnown RBP11.83□□□□□ -0.52
LINC00458-206ENST00000607494 KDF1Q8NAX2 398 aaPredicted RBP11.83□□□□□ -0.52
LINC00458-206ENST00000607494 POLMQ9NP87 494 aaPredicted RBP11.83□□□□□ -0.52
LINC00458-206ENST00000607494 CYLDQ9NQC7 956 aa11.83□□□□□ -0.52
LINC00458-206ENST00000607494 FAM181BA6NEQ2 426 aa11.82□□□□□ -0.52
LINC00458-206ENST00000607494 ADH1AP07327 375 aa11.82□□□□□ -0.52
LINC00458-206ENST00000607494 PCDHB9Q9Y5E1 797 aa11.82□□□□□ -0.52
LINC00458-206ENST00000607494 PRKCSHP14314 528 aaPredicted RBP11.81□□□□□ -0.52
LINC00458-206ENST00000607494 KRT76Q01546 638 aa11.81□□□□□ -0.52
LINC00458-206ENST00000607494 CCDC155Q8N6L0 562 aa11.81□□□□□ -0.52
LINC00458-206ENST00000607494 ZBBXA8MT70 800 aa11.8□□□□□ -0.52
LINC00458-206ENST00000607494 RNF217Q8TC41 542 aa11.8□□□□□ -0.52
LINC00458-206ENST00000607494 GPR37L1O60883 481 aa11.79□□□□□ -0.52
LINC00458-206ENST00000607494 GIGYF1O75420 1035 aaPredicted RBP11.79□□□□□ -0.52
LINC00458-206ENST00000607494 FOXD4L5Q5VV16 416 aaPredicted RBP11.79□□□□□ -0.52
LINC00458-206ENST00000607494 SLC35F4A4IF30 521 aa11.77□□□□□ -0.53
LINC00458-206ENST00000607494 MTMR14Q8NCE2 650 aa11.77□□□□□ -0.53
LINC00458-206ENST00000607494 PTGIRP43119 386 aa11.76□□□□□ -0.53
LINC00458-206ENST00000607494 CNTNAP3BQ96NU0 1288 aa11.75□□□□□ -0.53
LINC00458-206ENST00000607494 CNTNAP3Q9BZ76 1288 aa11.75□□□□□ -0.53
LINC00458-206ENST00000607494 SNRKQ9NRH2 765 aa11.75□□□□□ -0.53
LINC00458-206ENST00000607494 SENP3-EIF4A1A0A087X0R7 540 aa11.74□□□□□ -0.53
LINC00458-206ENST00000607494 CDC14CA4D256 554 aa11.73□□□□□ -0.53
LINC00458-206ENST00000607494 ITGA6P23229 1130 aa11.73□□□□□ -0.53
LINC00458-206ENST00000607494 RNFT1Q5M7Z0 435 aa11.73□□□□□ -0.53
LINC00458-206ENST00000607494 SEPT12Q8IYM1 358 aa11.73□□□□□ -0.53
LINC00458-206ENST00000607494 COL25A1Q9BXS0 654 aaPredicted RBP11.73□□□□□ -0.53
LINC00458-206ENST00000607494 VWA5B2Q8N398 1253 aa11.71□□□□□ -0.53
LINC00458-206ENST00000607494 NANOS1Q8WY41 292 aaKnown RBP11.71□□□□□ -0.53
LINC00458-206ENST00000607494 RHOQP17081 205 aa11.7□□□□□ -0.54
LINC00458-206ENST00000607494 SCTRP47872 440 aa11.7□□□□□ -0.54
LINC00458-206ENST00000607494 NR1H3Q13133 447 aa11.7□□□□□ -0.54
LINC00458-206ENST00000607494 PRICKLE2Q7Z3G6 844 aa11.69□□□□□ -0.54
LINC00458-206ENST00000607494 CUEDC1Q9NWM3 386 aaPredicted RBP11.69□□□□□ -0.54
LINC00458-206ENST00000607494 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
LINC00458-206ENST00000607494 BANK1Q8NDB2 785 aa11.68□□□□□ -0.54
LINC00458-206ENST00000607494 NDUFB9Q9Y6M9 179 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms