RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 SOX11P35716 441 aa7.73□□□□□ -1.17
RNU6-88P-201ENST00000606801 EIF4G2P78344 907 aaKnown RBP eCLIP7.73□□□□□ -1.17
RNU6-88P-201ENST00000606801 BPHLQ86WA6 291 aaPredicted RBP7.73□□□□□ -1.17
RNU6-88P-201ENST00000606801 CARD14Q9BXL6 1004 aa7.73□□□□□ -1.17
RNU6-88P-201ENST00000606801 SEMA3FQ13275 785 aa7.72□□□□□ -1.17
RNU6-88P-201ENST00000606801 ZBTB33Q86T24 672 aa7.72□□□□□ -1.17
RNU6-88P-201ENST00000606801 PHTF2Q8N3S3 785 aa7.72□□□□□ -1.17
RNU6-88P-201ENST00000606801 MPNDQ8N594 471 aa7.72□□□□□ -1.17
RNU6-88P-201ENST00000606801 CEP126Q9P2H0 1117 aa7.72□□□□□ -1.17
RNU6-88P-201ENST00000606801 PIK3CDO00329 1044 aa7.71□□□□□ -1.18
RNU6-88P-201ENST00000606801 ALDH1A1P00352 501 aa7.71□□□□□ -1.18
RNU6-88P-201ENST00000606801 CRIPAKQ8N1N5 446 aa7.71□□□□□ -1.18
RNU6-88P-201ENST00000606801 SERPINA10Q9UK55 444 aa7.71□□□□□ -1.18
RNU6-88P-201ENST00000606801 PCDHB9Q9Y5E1 797 aa7.71□□□□□ -1.18
RNU6-88P-201ENST00000606801 AGERQ15109 404 aa7.7□□□□□ -1.18
RNU6-88P-201ENST00000606801 TSGA10IPQ3SY00 556 aa7.7□□□□□ -1.18
RNU6-88P-201ENST00000606801 TBC1D9Q6ZT07 1266 aa7.7□□□□□ -1.18
RNU6-88P-201ENST00000606801 TRMT44Q8IYL2 757 aaKnown RBP7.7□□□□□ -1.18
RNU6-88P-201ENST00000606801 FAM174AQ8TBP5 190 aa7.7□□□□□ -1.18
RNU6-88P-201ENST00000606801 TLL2Q9Y6L7 1015 aa7.7□□□□□ -1.18
RNU6-88P-201ENST00000606801 SMCPP49901 116 aaPredicted RBP7.69□□□□□ -1.18
RNU6-88P-201ENST00000606801 CTC1Q2NKJ3 1217 aa7.69□□□□□ -1.18
RNU6-88P-201ENST00000606801 CFAP70Q5T0N1 1121 aa7.69□□□□□ -1.18
RNU6-88P-201ENST00000606801 HPS1Q92902 700 aa7.69□□□□□ -1.18
RNU6-88P-201ENST00000606801 PPP1R12CQ9BZL4 782 aa7.69□□□□□ -1.18
RNU6-88P-201ENST00000606801 AAASQ9NRG9 546 aa7.69□□□□□ -1.18
RNU6-88P-201ENST00000606801 CHIC2Q9UKJ5 165 aa7.69□□□□□ -1.18
RNU6-88P-201ENST00000606801 PALM3A6NDB9 673 aaPredicted RBP7.68□□□□□ -1.18
RNU6-88P-201ENST00000606801 ST8SIA5O15466 376 aa7.68□□□□□ -1.18
RNU6-88P-201ENST00000606801 GIGYF1O75420 1035 aaPredicted RBP7.68□□□□□ -1.18
RNU6-88P-201ENST00000606801 SRPK2P78362 688 aaKnown RBP7.68□□□□□ -1.18
RNU6-88P-201ENST00000606801 DZIP3Q86Y13 1208 aaKnown RBP7.68□□□□□ -1.18
RNU6-88P-201ENST00000606801 CCDC97Q96F63 343 aaPredicted RBP7.68□□□□□ -1.18
RNU6-88P-201ENST00000606801 CDK15Q96Q40 435 aa7.68□□□□□ -1.18
RNU6-88P-201ENST00000606801 TFIP11Q9UBB9 837 aaKnown RBP7.68□□□□□ -1.18
RNU6-88P-201ENST00000606801 WASF2Q9Y6W5 498 aa7.68□□□□□ -1.18
RNU6-88P-201ENST00000606801 MCCD1P59942 119 aaPredicted RBP7.67□□□□□ -1.18
RNU6-88P-201ENST00000606801 ESPNB1AK53 854 aa7.66□□□□□ -1.18
RNU6-88P-201ENST00000606801 AXIN1O15169 862 aa7.66□□□□□ -1.18
RNU6-88P-201ENST00000606801 GRM5P41594 1212 aa7.66□□□□□ -1.18
RNU6-88P-201ENST00000606801 CCDC85AQ96PX6 553 aaPredicted RBP7.65□□□□□ -1.18
RNU6-88P-201ENST00000606801 MAFBQ9Y5Q3 323 aaPredicted RBP7.65□□□□□ -1.18
RNU6-88P-201ENST00000606801 ATP9BO43861 1147 aa7.64□□□□□ -1.19
RNU6-88P-201ENST00000606801 ADH1CP00326 375 aa7.64□□□□□ -1.19
RNU6-88P-201ENST00000606801 RFX1P22670 979 aa7.64□□□□□ -1.19
RNU6-88P-201ENST00000606801 ARID5BQ14865 1188 aa7.64□□□□□ -1.19
RNU6-88P-201ENST00000606801 SLC10A4Q96EP9 437 aa7.64□□□□□ -1.19
RNU6-88P-201ENST00000606801 DACH1Q9UI36 760 aa7.64□□□□□ -1.19
RNU6-88P-201ENST00000606801 MAP4K5Q9Y4K4 846 aa7.64□□□□□ -1.19
RNU6-88P-201ENST00000606801 LMOD1P29536 600 aaPredicted RBP7.63□□□□□ -1.19
RNU6-88P-201ENST00000606801 NNTQ13423 1086 aa7.63□□□□□ -1.19
RNU6-88P-201ENST00000606801 NFATC2IPQ8NCF5 419 aa7.63□□□□□ -1.19
RNU6-88P-201ENST00000606801 KCTD15Q96SI1 283 aaPredicted RBP7.63□□□□□ -1.19
RNU6-88P-201ENST00000606801 SKIP12755 728 aa7.62□□□□□ -1.19
RNU6-88P-201ENST00000606801 SLFNL1Q499Z3 407 aa7.62□□□□□ -1.19
RNU6-88P-201ENST00000606801 INTS6LQ5JSJ4 861 aaKnown RBP7.62□□□□□ -1.19
RNU6-88P-201ENST00000606801 KANK4Q5T7N3 995 aaPredicted RBP7.62□□□□□ -1.19
RNU6-88P-201ENST00000606801 ZNF787Q6DD87 383 aa7.62□□□□□ -1.19
RNU6-88P-201ENST00000606801 RNF135Q8IUD6 432 aa7.62□□□□□ -1.19
RNU6-88P-201ENST00000606801 CDCA7Q9BWT1 371 aaPredicted RBP7.62□□□□□ -1.19
RNU6-88P-201ENST00000606801 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.61□□□□□ -1.19
RNU6-88P-201ENST00000606801 POTECB2RU33 542 aa7.61□□□□□ -1.19
RNU6-88P-201ENST00000606801 NR5A1Q13285 461 aa7.61□□□□□ -1.19
RNU6-88P-201ENST00000606801 DEPDC4Q8N2C3 294 aa7.61□□□□□ -1.19
RNU6-88P-201ENST00000606801 PLPP7Q8NBV4 271 aa7.61□□□□□ -1.19
RNU6-88P-201ENST00000606801 ZNF592Q92610 1267 aa7.61□□□□□ -1.19
RNU6-88P-201ENST00000606801 USP17L5A8MUK1 530 aa7.6□□□□□ -1.19
RNU6-88P-201ENST00000606801 CAPN5O15484 640 aaPredicted RBP7.6□□□□□ -1.19
RNU6-88P-201ENST00000606801 VASH1Q7L8A9 365 aaPredicted RBP7.6□□□□□ -1.19
RNU6-88P-201ENST00000606801 PLEKHM2Q8IWE5 1019 aa7.6□□□□□ -1.19
RNU6-88P-201ENST00000606801 KLF16Q9BXK1 252 aaPredicted RBP7.6□□□□□ -1.19
RNU6-88P-201ENST00000606801 CDV3Q9UKY7 258 aaKnown RBP7.6□□□□□ -1.19
RNU6-88P-201ENST00000606801 USP17L3A6NCW0 530 aa7.59□□□□□ -1.19
RNU6-88P-201ENST00000606801 USP17L4A6NCW7 530 aa7.59□□□□□ -1.19
RNU6-88P-201ENST00000606801 NR3C2P08235 984 aa7.59□□□□□ -1.19
RNU6-88P-201ENST00000606801 NBPF20Q3BBV1 942 aa7.59□□□□□ -1.19
RNU6-88P-201ENST00000606801 CDCA8Q53HL2 280 aa7.59□□□□□ -1.19
RNU6-88P-201ENST00000606801 USP17L2Q6R6M4 530 aa7.59□□□□□ -1.19
RNU6-88P-201ENST00000606801 USP17L1Q7RTZ2 530 aa7.59□□□□□ -1.19
RNU6-88P-201ENST00000606801 SEPT12Q8IYM1 358 aa7.59□□□□□ -1.19
RNU6-88P-201ENST00000606801 ATP13A2Q9NQ11 1180 aa7.59□□□□□ -1.19
RNU6-88P-201ENST00000606801 ERVH48-1M5A8F1 160 aa7.58□□□□□ -1.2
RNU6-88P-201ENST00000606801 TIMP2P16035 220 aa7.58□□□□□ -1.2
RNU6-88P-201ENST00000606801 NCOA4Q13772 614 aa7.58□□□□□ -1.2
RNU6-88P-201ENST00000606801 ARXQ96QS3 562 aa7.58□□□□□ -1.2
RNU6-88P-201ENST00000606801 GMPR2Q9P2T1 348 aaKnown RBP7.58□□□□□ -1.2
RNU6-88P-201ENST00000606801 FSHRP23945 695 aa7.57□□□□□ -1.2
RNU6-88P-201ENST00000606801 WDR4P57081 412 aaKnown RBP7.57□□□□□ -1.2
RNU6-88P-201ENST00000606801 RAB15P59190 212 aa7.57□□□□□ -1.2
RNU6-88P-201ENST00000606801 MAP7D1Q3KQU3 841 aa7.57□□□□□ -1.2
RNU6-88P-201ENST00000606801 RNF20Q5VTR2 975 aa7.57□□□□□ -1.2
RNU6-88P-201ENST00000606801 PBXIP1Q96AQ6 731 aa7.57□□□□□ -1.2
RNU6-88P-201ENST00000606801 TMPRSS4Q9NRS4 437 aa7.57□□□□□ -1.2
RNU6-88P-201ENST00000606801 PPP1R15AO75807 674 aaPredicted RBP7.56□□□□□ -1.2
RNU6-88P-201ENST00000606801 SCTRP47872 440 aa7.56□□□□□ -1.2
RNU6-88P-201ENST00000606801 DOLKQ9UPQ8 538 aa7.56□□□□□ -1.2
RNU6-88P-201ENST00000606801 ZBTB7BO15156 539 aaPredicted RBP7.55□□□□□ -1.2
RNU6-88P-201ENST00000606801 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
RNU6-88P-201ENST00000606801 ZIC2O95409 532 aaPredicted RBP7.55□□□□□ -1.2
RNU6-88P-201ENST00000606801 CCDC116Q8IYX3 515 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms