RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 MAFBQ9Y5Q3 323 aaPredicted RBP3.31□□□□□ -1.88
SNORA28-201ENST00000606769 V9GY48 417 aaPredicted RBP3.31□□□□□ -1.88
SNORA28-201ENST00000606769 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.3□□□□□ -1.88
SNORA28-201ENST00000606769 J3QL48 77 aa3.3□□□□□ -1.88
SNORA28-201ENST00000606769 DKK1O94907 266 aa3.3□□□□□ -1.88
SNORA28-201ENST00000606769 CD2BP2O95400 341 aaKnown RBP3.3□□□□□ -1.88
SNORA28-201ENST00000606769 ZBTB33Q86T24 672 aa3.3□□□□□ -1.88
SNORA28-201ENST00000606769 DEPDC4Q8N2C3 294 aa3.3□□□□□ -1.88
SNORA28-201ENST00000606769 PNMA1Q8ND90 353 aa3.3□□□□□ -1.88
SNORA28-201ENST00000606769 ARID3AQ99856 593 aa3.3□□□□□ -1.88
SNORA28-201ENST00000606769 USP17L5A8MUK1 530 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 ERVH48-1M5A8F1 160 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 TNFRSF10AO00220 468 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 ATP9BO43861 1147 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 LILRA1O75019 489 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 SMPD1P17405 629 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 SCTRP47872 440 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 PRR20EP86478 221 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 PRR20CP86479 221 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 PRR20DP86480 221 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 PRR20BP86481 221 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 PRR20AP86496 221 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 SEMA3FQ13275 785 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 AGERQ15109 404 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 DZIP3Q86Y13 1208 aaKnown RBP3.29□□□□□ -1.88
SNORA28-201ENST00000606769 PLEKHM2Q8IWE5 1019 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 KDF1Q8NAX2 398 aaPredicted RBP3.29□□□□□ -1.88
SNORA28-201ENST00000606769 PLPP7Q8NBV4 271 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 NFATC2IPQ8NCF5 419 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 EHBP1Q8NDI1 1231 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 KCTD15Q96SI1 283 aaPredicted RBP3.29□□□□□ -1.88
SNORA28-201ENST00000606769 TMPRSS4Q9NRS4 437 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 SERPINA10Q9UK55 444 aa3.29□□□□□ -1.88
SNORA28-201ENST00000606769 USP17L3A6NCW0 530 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 USP17L4A6NCW7 530 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 ZBTB7BO15156 539 aaPredicted RBP3.28□□□□□ -1.88
SNORA28-201ENST00000606769 ADH1CP00326 375 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 SKIP12755 728 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 FSHRP23945 695 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 ADD1P35611 737 aaKnown RBP3.28□□□□□ -1.88
SNORA28-201ENST00000606769 MCCD1P59942 119 aaPredicted RBP3.28□□□□□ -1.88
SNORA28-201ENST00000606769 CLDN10P78369 228 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 FOXC1Q12948 553 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 NCOA4Q13772 614 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 USP17L2Q6R6M4 530 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 USP17L1Q7RTZ2 530 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 RNF135Q8IUD6 432 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 WWC1Q8IX03 1113 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 SLC10A4Q96EP9 437 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 SLAIN2Q9P270 581 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 ZMIZ1Q9ULJ6 1067 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 KIAA1024Q9UPX6 916 aa3.28□□□□□ -1.88
SNORA28-201ENST00000606769 CARNS1A5YM72 827 aa3.27□□□□□ -1.89
SNORA28-201ENST00000606769 LCE2BO14633 110 aa3.27□□□□□ -1.89
SNORA28-201ENST00000606769 STAU1O95793 577 aaKnown RBP3.27□□□□□ -1.89
SNORA28-201ENST00000606769 RFX1P22670 979 aa3.27□□□□□ -1.89
SNORA28-201ENST00000606769 LMOD1P29536 600 aaPredicted RBP3.27□□□□□ -1.89
SNORA28-201ENST00000606769 CRTC2Q53ET0 693 aaPredicted RBP3.27□□□□□ -1.89
SNORA28-201ENST00000606769 CDCA8Q53HL2 280 aa3.27□□□□□ -1.89
SNORA28-201ENST00000606769 VASH1Q7L8A9 365 aaPredicted RBP3.27□□□□□ -1.89
SNORA28-201ENST00000606769 SNIP1Q8TAD8 396 aaKnown RBP3.27□□□□□ -1.89
SNORA28-201ENST00000606769 CCDC97Q96F63 343 aaPredicted RBP3.27□□□□□ -1.89
SNORA28-201ENST00000606769 ARXQ96QS3 562 aa3.27□□□□□ -1.89
SNORA28-201ENST00000606769 PCDHGA11Q9Y5H2 935 aa3.27□□□□□ -1.89
SNORA28-201ENST00000606769 TMEM88BA6NKF7 163 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 RGS20O76081 388 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 ALDH1A1P00352 501 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 TIMP2P16035 220 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 RAB15P59190 212 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 ERVK-9P63128 1117 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 FAM69CQ0P6D2 419 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 NNTQ13423 1086 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 ARID5BQ14865 1188 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 NBPF20Q3BBV1 942 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 SLFNL1Q499Z3 407 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 PPP1R26Q5T8A7 1209 aaPredicted RBP3.26□□□□□ -1.89
SNORA28-201ENST00000606769 SEPT12Q8IYM1 358 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 ZNF784Q8NCA9 323 aaPredicted RBP3.26□□□□□ -1.89
SNORA28-201ENST00000606769 HPS1Q92902 700 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 PBXIP1Q96AQ6 731 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 OSBPL3Q9H4L5 887 aa3.26□□□□□ -1.89
SNORA28-201ENST00000606769 CDV3Q9UKY7 258 aaKnown RBP3.26□□□□□ -1.89
SNORA28-201ENST00000606769 ATG7O95352 703 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 SCNN1DP51172 638 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 CBLBQ13191 982 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 NR5A1Q13285 461 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 PTK7Q13308 1070 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 MAP7D1Q3KQU3 841 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 OXLD1Q5BKU9 147 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 CCDC116Q8IYX3 515 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 STK32AQ8WU08 396 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 ITPKCQ96DU7 683 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 ZFAND3Q9H8U3 227 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 CYLDQ9NQC7 956 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 MKRN1Q9UHC7 482 aaKnown RBP3.25□□□□□ -1.89
SNORA28-201ENST00000606769 DOLKQ9UPQ8 538 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 PCDHB11Q9Y5F2 797 aa3.25□□□□□ -1.89
SNORA28-201ENST00000606769 TMEM229AB2RXF0 380 aa3.24□□□□□ -1.89
SNORA28-201ENST00000606769 AVPP01185 164 aa3.24□□□□□ -1.89
SNORA28-201ENST00000606769 Q6ZVU0 165 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms