RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 CLEC17AQ6ZS10 378 aa18.87■□□□□ 0.61
RER1-209ENST00000605895 IQGAP1P46940 1657 aa18.87■□□□□ 0.61
RER1-209ENST00000605895 RNF17Q9BXT8 1623 aaKnown RBP18.86■□□□□ 0.61
RER1-209ENST00000605895 SDSP20132 328 aa18.86■□□□□ 0.61
RER1-209ENST00000605895 NOLC1Q14978 699 aaKnown RBP eCLIP18.86■□□□□ 0.61
RER1-209ENST00000605895 U2AF2P26368 475 aaKnown RBP eCLIP18.86■□□□□ 0.616e-7■□□□□ 11
RER1-209ENST00000605895 SPC24Q8NBT2 197 aa18.86■□□□□ 0.61
RER1-209ENST00000605895 MYRIPQ8NFW9 859 aa18.86■□□□□ 0.61
RER1-209ENST00000605895 ZBTB22O15209 634 aa18.85■□□□□ 0.61
RER1-209ENST00000605895 SRPK2P78362 688 aaKnown RBP18.85■□□□□ 0.61
RER1-209ENST00000605895 ZNF518AQ6AHZ1 1483 aa18.85■□□□□ 0.61
RER1-209ENST00000605895 BBXQ8WY36 941 aaPredicted RBP18.85■□□□□ 0.61
RER1-209ENST00000605895 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
RER1-209ENST00000605895 SPAG9O60271 1321 aaKnown RBP18.85■□□□□ 0.61
RER1-209ENST00000605895 PRKAR2BP31323 418 aa18.84■□□□□ 0.61
RER1-209ENST00000605895 UPF3BQ9BZI7 483 aaKnown RBP18.84■□□□□ 0.61
RER1-209ENST00000605895 CEP152O94986 1710 aa18.84■□□□□ 0.61
RER1-209ENST00000605895 ARHGEF5Q12774 1597 aa18.84■□□□□ 0.61
RER1-209ENST00000605895 MTERF4Q7Z6M4 381 aaKnown RBP18.84■□□□□ 0.61
RER1-209ENST00000605895 ABCA8O94911 1581 aa18.84■□□□□ 0.61
RER1-209ENST00000605895 HCLS1P14317 486 aaPredicted RBP18.84■□□□□ 0.61
RER1-209ENST00000605895 DCTN1Q14203 1278 aa18.84■□□□□ 0.61
RER1-209ENST00000605895 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
RER1-209ENST00000605895 SHPRHQ149N8 1683 aa18.84■□□□□ 0.61
RER1-209ENST00000605895 TTC22Q5TAA0 569 aa18.83■□□□□ 0.61
RER1-209ENST00000605895 PHACTR3Q96KR7 559 aa18.83■□□□□ 0.61
RER1-209ENST00000605895 ADCY5O95622 1261 aa18.82■□□□□ 0.6
RER1-209ENST00000605895 CT47B1P0C2W7 299 aaPredicted RBP18.82■□□□□ 0.6
RER1-209ENST00000605895 FGD1P98174 961 aa18.82■□□□□ 0.6
RER1-209ENST00000605895 KRT24Q2M2I5 525 aa18.82■□□□□ 0.6
RER1-209ENST00000605895 TMX3Q96JJ7 454 aa18.82■□□□□ 0.6
RER1-209ENST00000605895 BCL2L12Q9HB09 334 aa18.82■□□□□ 0.6
RER1-209ENST00000605895 NOS1P29475 1434 aa18.82■□□□□ 0.6
RER1-209ENST00000605895 ATP10AO60312 1499 aa18.82■□□□□ 0.6
RER1-209ENST00000605895 CDC42BPBQ9Y5S2 1711 aa18.82■□□□□ 0.6
RER1-209ENST00000605895 INTS3Q68E01 1043 aaKnown RBP18.82■□□□□ 0.6
RER1-209ENST00000605895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.82■□□□□ 0.6
RER1-209ENST00000605895 FAM83GA6ND36 823 aa18.81■□□□□ 0.6
RER1-209ENST00000605895 VGLL3A8MV65 326 aa18.81■□□□□ 0.6
RER1-209ENST00000605895 KIF3AQ9Y496 699 aa18.81■□□□□ 0.6
RER1-209ENST00000605895 KANK1Q14678 1352 aa18.81■□□□□ 0.6
RER1-209ENST00000605895 VAMP4O75379 141 aa18.81■□□□□ 0.6
RER1-209ENST00000605895 MRPL50Q8N5N7 158 aaKnown RBP18.81■□□□□ 0.6
RER1-209ENST00000605895 CHMP3Q9Y3E7 222 aa18.81■□□□□ 0.6
RER1-209ENST00000605895 TRAPPC8Q9Y2L5 1435 aa18.8■□□□□ 0.6
RER1-209ENST00000605895 DIAPH1O60610 1272 aaKnown RBP18.8■□□□□ 0.6
RER1-209ENST00000605895 MCM5P33992 734 aa18.79■□□□□ 0.6
RER1-209ENST00000605895 C8orf58Q8NAV2 365 aa18.79■□□□□ 0.6
RER1-209ENST00000605895 CWC22Q9HCG8 908 aaKnown RBP18.79■□□□□ 0.6
RER1-209ENST00000605895 UNC13BO14795 1591 aa18.79■□□□□ 0.6
RER1-209ENST00000605895 MAST1Q9Y2H9 1570 aa18.79■□□□□ 0.6
RER1-209ENST00000605895 IQGAP3Q86VI3 1631 aa18.79■□□□□ 0.6
RER1-209ENST00000605895 USP48Q86UV5 1035 aa18.79■□□□□ 0.6
RER1-209ENST00000605895 PDCL2Q8N4E4 241 aa18.79■□□□□ 0.6
RER1-209ENST00000605895 CGNQ9P2M7 1197 aaKnown RBP18.78■□□□□ 0.6
RER1-209ENST00000605895 PALD1Q9ULE6 856 aa18.78■□□□□ 0.6
RER1-209ENST00000605895 EFCAB2Q5VUJ9 269 aa18.78■□□□□ 0.6
RER1-209ENST00000605895 NAA30Q147X3 362 aaPredicted RBP18.77■□□□□ 0.6
RER1-209ENST00000605895 ABCC11Q96J66 1382 aa18.77■□□□□ 0.59
RER1-209ENST00000605895 TWISTNBQ3B726 338 aaPredicted RBP18.76■□□□□ 0.59
RER1-209ENST00000605895 CASC1Q6TDU7 716 aa18.76■□□□□ 0.59
RER1-209ENST00000605895 MINK1Q8N4C8 1332 aaPredicted RBP18.76■□□□□ 0.59
RER1-209ENST00000605895 RIOK3O14730 519 aaKnown RBP18.76■□□□□ 0.59
RER1-209ENST00000605895 ZNF771Q7L3S4 317 aaPredicted RBP18.76■□□□□ 0.59
RER1-209ENST00000605895 PIBF1Q8WXW3 757 aa18.76■□□□□ 0.59
RER1-209ENST00000605895 MBIPQ9NS73 344 aa18.76■□□□□ 0.59
RER1-209ENST00000605895 PYCARDQ9ULZ3 195 aa18.76■□□□□ 0.59
RER1-209ENST00000605895 CLTCL1P53675 1640 aa18.75■□□□□ 0.59
RER1-209ENST00000605895 TTC37Q6PGP7 1564 aa18.75■□□□□ 0.59
RER1-209ENST00000605895 RILPL2Q969X0 211 aa18.75■□□□□ 0.59
RER1-209ENST00000605895 ANO2Q9NQ90 1003 aa18.75■□□□□ 0.59
RER1-209ENST00000605895 MBD3O95983 291 aa18.75■□□□□ 0.59
RER1-209ENST00000605895 ALDH1L2Q3SY69 923 aa18.75■□□□□ 0.59
RER1-209ENST00000605895 GIMAP6Q6P9H5 292 aa18.75■□□□□ 0.59
RER1-209ENST00000605895 CNPY2Q9Y2B0 182 aa18.74■□□□□ 0.59
RER1-209ENST00000605895 FIBPO43427 364 aa18.74■□□□□ 0.59
RER1-209ENST00000605895 SLC24A1O60721 1099 aa18.74■□□□□ 0.59
RER1-209ENST00000605895 DUOX2Q9NRD8 1548 aa18.73■□□□□ 0.59
RER1-209ENST00000605895 FYB1O15117 783 aa18.73■□□□□ 0.59
RER1-209ENST00000605895 SLC4A10Q6U841 1118 aa18.73■□□□□ 0.59
RER1-209ENST00000605895 TRIM6-TRIM34B2RNG4 842 aa18.73■□□□□ 0.59
RER1-209ENST00000605895 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.72■□□□□ 0.59
RER1-209ENST00000605895 CFAP74Q9C0B2 1584 aa18.72■□□□□ 0.59
RER1-209ENST00000605895 UTP14CQ5TAP6 766 aaKnown RBP18.72■□□□□ 0.59
RER1-209ENST00000605895 GGT6Q6P531 493 aa18.72■□□□□ 0.59
RER1-209ENST00000605895 DCTPP1Q9H773 170 aa18.72■□□□□ 0.59
RER1-209ENST00000605895 ERC2O15083 957 aa18.71■□□□□ 0.59
RER1-209ENST00000605895 REC8O95072 547 aa18.71■□□□□ 0.59
RER1-209ENST00000605895 EXOC6BQ9Y2D4 811 aa18.71■□□□□ 0.59
RER1-209ENST00000605895 EVC2Q86UK5 1308 aa18.71■□□□□ 0.59
RER1-209ENST00000605895 AP5Z1O43299 807 aa18.71■□□□□ 0.59
RER1-209ENST00000605895 BRD1O95696 1058 aa18.71■□□□□ 0.59
RER1-209ENST00000605895 MEIS3Q99687 375 aa18.71■□□□□ 0.59
RER1-209ENST00000605895 MAP4K4O95819 1239 aaPredicted RBP18.7■□□□□ 0.58
RER1-209ENST00000605895 HMGN5P82970 282 aaKnown RBP18.7■□□□□ 0.58
RER1-209ENST00000605895 CFAP65Q6ZU64 1925 aaKnown RBP18.7■□□□□ 0.58
RER1-209ENST00000605895 SYAP1Q96A49 352 aaPredicted RBP18.7■□□□□ 0.58
RER1-209ENST00000605895 PRIMPOLQ96LW4 560 aa18.7■□□□□ 0.58
RER1-209ENST00000605895 GTF2E1P29083 439 aaPredicted RBP18.68■□□□□ 0.58
RER1-209ENST00000605895 CHMP4BQ9H444 224 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms