RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 AXIN2Q9Y2T1 843 aa29.97■■■□□ 2.39
VIM-AS1-202ENST00000605833 ROCK2O75116 1388 aaKnown RBP29.97■■■□□ 2.39
VIM-AS1-202ENST00000605833 DDB1Q16531 1140 aa29.95■■■□□ 2.39
VIM-AS1-202ENST00000605833 WDR17Q8IZU2 1322 aa29.95■■■□□ 2.38
VIM-AS1-202ENST00000605833 TTC21BQ7Z4L5 1316 aa29.94■■■□□ 2.38
VIM-AS1-202ENST00000605833 PTF1AQ7RTS3 328 aa29.93■■■□□ 2.38
VIM-AS1-202ENST00000605833 NFAT5O94916 1531 aa29.92■■■□□ 2.38
VIM-AS1-202ENST00000605833 MON2Q7Z3U7 1717 aa29.91■■■□□ 2.38
VIM-AS1-202ENST00000605833 C11orf95C9JLR9 678 aaPredicted RBP29.91■■■□□ 2.38
VIM-AS1-202ENST00000605833 NEUROD1Q13562 356 aa29.91■■■□□ 2.38
VIM-AS1-202ENST00000605833 ARHGEF25Q86VW2 580 aa29.9■■■□□ 2.38
VIM-AS1-202ENST00000605833 MARCH10Q8NA82 808 aaPredicted RBP29.88■■■□□ 2.37
VIM-AS1-202ENST00000605833 CASZ1Q86V15 1759 aa29.87■■■□□ 2.37
VIM-AS1-202ENST00000605833 CSB-PGBD3P0DP91 1061 aa29.87■■■□□ 2.37
VIM-AS1-202ENST00000605833 ANO8Q9HCE9 1232 aaPredicted RBP29.87■■■□□ 2.37
VIM-AS1-202ENST00000605833 KCNH5Q8NCM2 988 aa29.86■■■□□ 2.37
VIM-AS1-202ENST00000605833 ZNF692Q9BU19 519 aaPredicted RBP29.86■■■□□ 2.37
VIM-AS1-202ENST00000605833 TTC21AQ8NDW8 1320 aa29.86■■■□□ 2.37
VIM-AS1-202ENST00000605833 KTN1Q86UP2 1357 aaKnown RBP29.86■■■□□ 2.37
VIM-AS1-202ENST00000605833 SPON1Q9HCB6 807 aa29.85■■■□□ 2.37
VIM-AS1-202ENST00000605833 BCL11BQ9C0K0 894 aaPredicted RBP29.84■■■□□ 2.37
VIM-AS1-202ENST00000605833 PPP1R1BQ9UD71 204 aaPredicted RBP29.84■■■□□ 2.37
VIM-AS1-202ENST00000605833 PLSCR1O15162 318 aa29.83■■■□□ 2.37
VIM-AS1-202ENST00000605833 KCNQ2O43526 872 aa29.83■■■□□ 2.37
VIM-AS1-202ENST00000605833 CDCA7Q9BWT1 371 aaPredicted RBP29.82■■■□□ 2.36
VIM-AS1-202ENST00000605833 CARD10Q9BWT7 1032 aa29.82■■■□□ 2.36
VIM-AS1-202ENST00000605833 LTN1O94822 1766 aa29.82■■■□□ 2.36
VIM-AS1-202ENST00000605833 USP54Q70EL1 1684 aa29.82■■■□□ 2.36
VIM-AS1-202ENST00000605833 ABCC6O95255 1503 aa29.81■■■□□ 2.36
VIM-AS1-202ENST00000605833 BCL9O00512 1426 aa29.79■■■□□ 2.36
VIM-AS1-202ENST00000605833 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.79■■■□□ 2.36
VIM-AS1-202ENST00000605833 PDGFDQ9GZP0 370 aaPredicted RBP29.78■■■□□ 2.36
VIM-AS1-202ENST00000605833 TNS2Q63HR2 1409 aa29.78■■■□□ 2.36
VIM-AS1-202ENST00000605833 CD163L1Q9NR16 1453 aa29.77■■■□□ 2.36
VIM-AS1-202ENST00000605833 PROM2Q8N271 834 aa29.77■■■□□ 2.36
VIM-AS1-202ENST00000605833 CCDC7Q96M83 1385 aa29.77■■■□□ 2.36
VIM-AS1-202ENST00000605833 NINLQ9Y2I6 1382 aa29.76■■■□□ 2.35
VIM-AS1-202ENST00000605833 NHSQ6T4R5 1651 aa29.76■■■□□ 2.35
VIM-AS1-202ENST00000605833 MYOM1P52179 1685 aa29.75■■■□□ 2.35
VIM-AS1-202ENST00000605833 SBNO2Q9Y2G9 1366 aa29.75■■■□□ 2.35
VIM-AS1-202ENST00000605833 NME9Q86XW9 330 aa29.74■■■□□ 2.35
VIM-AS1-202ENST00000605833 EXOC5O00471 708 aa29.73■■■□□ 2.35
VIM-AS1-202ENST00000605833 YY1P25490 414 aa29.72■■■□□ 2.35
VIM-AS1-202ENST00000605833 USP31Q70CQ4 1352 aa29.72■■■□□ 2.35
VIM-AS1-202ENST00000605833 ZBTB7AO95365 584 aa29.71■■■□□ 2.35
VIM-AS1-202ENST00000605833 TXNRD1Q16881 649 aa29.7■■■□□ 2.35
VIM-AS1-202ENST00000605833 ERBB3P21860 1342 aa29.7■■■□□ 2.34
VIM-AS1-202ENST00000605833 TMC1Q8TDI8 760 aa29.69■■■□□ 2.34
VIM-AS1-202ENST00000605833 CARD11Q9BXL7 1154 aa29.69■■■□□ 2.34
VIM-AS1-202ENST00000605833 ACSBG1Q96GR2 724 aa29.67■■■□□ 2.34
VIM-AS1-202ENST00000605833 NLRP2Q9NX02 1062 aa29.67■■■□□ 2.34
VIM-AS1-202ENST00000605833 STK32BQ9NY57 414 aa29.66■■■□□ 2.34
VIM-AS1-202ENST00000605833 BTAF1O14981 1849 aa29.66■■■□□ 2.34
VIM-AS1-202ENST00000605833 EDC4Q6P2E9 1401 aaKnown RBP29.64■■■□□ 2.34
VIM-AS1-202ENST00000605833 SLC12A5Q9H2X9 1139 aa29.64■■■□□ 2.34
VIM-AS1-202ENST00000605833 A0A1W2PP64 1363 aa29.64■■■□□ 2.33
VIM-AS1-202ENST00000605833 HDGFL2Q7Z4V5 671 aaPredicted RBP29.63■■■□□ 2.33
VIM-AS1-202ENST00000605833 ATF5Q9Y2D1 282 aaPredicted RBP29.63■■■□□ 2.33
VIM-AS1-202ENST00000605833 PAPPAQ13219 1627 aa29.63■■■□□ 2.33
VIM-AS1-202ENST00000605833 PTGER2P43116 358 aa29.62■■■□□ 2.33
VIM-AS1-202ENST00000605833 SLC15A2Q16348 729 aa29.62■■■□□ 2.33
VIM-AS1-202ENST00000605833 ANKRD24Q8TF21 1146 aa29.62■■■□□ 2.33
VIM-AS1-202ENST00000605833 DCAF8L1A6NGE4 600 aa29.61■■■□□ 2.33
VIM-AS1-202ENST00000605833 IL2RBP14784 551 aa29.61■■■□□ 2.33
VIM-AS1-202ENST00000605833 KAT6BQ8WYB5 2073 aa29.6■■■□□ 2.33
VIM-AS1-202ENST00000605833 TONSLQ96HA7 1378 aa29.57■■■□□ 2.32
VIM-AS1-202ENST00000605833 FAM208AQ9UK61 1670 aaKnown RBP29.56■■■□□ 2.32
VIM-AS1-202ENST00000605833 TERF2IPQ9NYB0 399 aa29.55■■■□□ 2.32
VIM-AS1-202ENST00000605833 LTV1Q96GA3 475 aaPredicted RBP29.52■■■□□ 2.32
VIM-AS1-202ENST00000605833 RGPD2P0DJD1 1756 aa29.52■■■□□ 2.32
VIM-AS1-202ENST00000605833 FHDC1Q9C0D6 1143 aaPredicted RBP29.51■■■□□ 2.31
VIM-AS1-202ENST00000605833 MTFR1LQ9H019 292 aa29.51■■■□□ 2.31
VIM-AS1-202ENST00000605833 UTRNP46939 3433 aa29.5■■■□□ 2.31
VIM-AS1-202ENST00000605833 DOT1LQ8TEK3 1739 aa29.49■■■□□ 2.31
VIM-AS1-202ENST00000605833 ZNF827Q17R98 1081 aa29.49■■■□□ 2.31
VIM-AS1-202ENST00000605833 IP6K1Q92551 441 aa29.48■■■□□ 2.31
VIM-AS1-202ENST00000605833 SGIP1Q9BQI5 828 aa29.48■■■□□ 2.31
VIM-AS1-202ENST00000605833 SHANK3Q9BYB0 1731 aa29.47■■■□□ 2.31
VIM-AS1-202ENST00000605833 TRIM26Q12899 539 aaPredicted RBP29.46■■■□□ 2.31
VIM-AS1-202ENST00000605833 DDX54Q8TDD1 881 aaKnown RBP29.46■■■□□ 2.31
VIM-AS1-202ENST00000605833 SYT17Q9BSW7 474 aa29.46■■■□□ 2.31
VIM-AS1-202ENST00000605833 LRRC4BQ9NT99 713 aa29.46■■■□□ 2.31
VIM-AS1-202ENST00000605833 TUBGCP6Q96RT7 1819 aa29.45■■■□□ 2.31
VIM-AS1-202ENST00000605833 TESK2Q96S53 571 aa29.45■■■□□ 2.31
VIM-AS1-202ENST00000605833 FBLN1P23142 703 aa29.44■■■□□ 2.3
VIM-AS1-202ENST00000605833 PUS7Q96PZ0 661 aaKnown RBP29.44■■■□□ 2.3
VIM-AS1-202ENST00000605833 MAP3K19Q56UN5 1328 aa29.44■■■□□ 2.3
VIM-AS1-202ENST00000605833 QSER1Q2KHR3 1735 aa29.43■■■□□ 2.3
VIM-AS1-202ENST00000605833 ST20-MTHFSA0A0A6YYL1 179 aa29.42■■■□□ 2.3
VIM-AS1-202ENST00000605833 COG3Q96JB2 828 aa29.41■■■□□ 2.3
VIM-AS1-202ENST00000605833 HOXC9P31274 260 aa29.4■■■□□ 2.3
VIM-AS1-202ENST00000605833 ARXQ96QS3 562 aa29.4■■■□□ 2.3
VIM-AS1-202ENST00000605833 MEGF6O75095 1541 aa29.4■■■□□ 2.3
VIM-AS1-202ENST00000605833 CHD4Q14839 1912 aa29.38■■■□□ 2.29
VIM-AS1-202ENST00000605833 LY75O60449 1722 aa29.38■■■□□ 2.29
VIM-AS1-202ENST00000605833 AMPHP49418 695 aa29.38■■■□□ 2.29
VIM-AS1-202ENST00000605833 KCNQ4P56696 695 aa29.38■■■□□ 2.29
VIM-AS1-202ENST00000605833 SYTL4Q96C24 671 aaPredicted RBP29.38■■■□□ 2.29
VIM-AS1-202ENST00000605833 AKT1S1Q96B36 256 aa29.37■■■□□ 2.29
VIM-AS1-202ENST00000605833 NSD2O96028 1365 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms